Wall clock time and date at job start Sun Mar 7 2021 05:18:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35901 * 117.00119 * 2 1 4 4 C 1.38734 * 120.05340 * 179.97438 * 3 2 1 5 5 C 1.38142 * 119.93899 * 179.97438 * 4 3 2 6 6 C 1.38262 * 120.05944 * 359.97438 * 5 4 3 7 7 C 1.50703 * 119.94549 * 179.97438 * 6 5 4 8 8 H 1.09001 * 112.85069 * 11.20090 * 7 6 5 9 9 C 1.53784 * 113.61270 * 142.50620 * 7 6 5 10 10 C 1.53784 * 87.08238 * 139.98107 * 9 7 6 11 11 H 1.09005 * 113.69077 * 89.12161 * 10 9 7 12 12 N 1.46498 * 113.61657 * 220.01757 * 10 9 7 13 13 C 1.34774 * 119.99946 * 252.49563 * 12 10 9 14 14 O 1.21569 * 120.00124 * 0.02562 * 13 12 10 15 15 C 1.47695 * 119.99624 * 179.97438 * 13 12 10 16 16 C 1.39808 * 120.15218 * 180.02562 * 15 13 12 17 17 F 1.35099 * 120.08642 * 0.04167 * 16 15 13 18 18 C 1.38315 * 119.83134 * 180.02562 * 16 15 13 19 19 C 1.38185 * 120.14304 * 0.28121 * 18 16 15 20 20 C 1.50699 * 119.83826 * 179.72634 * 19 18 16 21 21 O 1.42894 * 109.47340 * 14.99127 * 20 19 18 22 22 Si 1.86296 * 109.47371 * 134.99712 * 20 19 18 23 23 C 1.38655 * 120.31416 * 359.43909 * 19 18 16 24 24 F 1.35103 * 119.91550 * 180.30712 * 23 19 18 25 25 C 1.38061 * 120.16989 * 0.55904 * 23 19 18 26 26 C 1.53781 * 87.08003 * 334.56933 * 10 9 7 27 27 C 1.38266 * 120.11081 * 0.28105 * 6 5 4 28 28 C 1.38142 * 120.05243 * 359.44377 * 27 6 5 29 29 H 1.09001 * 109.47307 * 300.00024 * 1 2 3 30 30 H 1.08997 * 109.47071 * 59.99793 * 1 2 3 31 31 H 1.09004 * 109.47195 * 180.02562 * 1 2 3 32 32 H 1.07995 * 120.03082 * 359.95623 * 4 3 2 33 33 H 1.08003 * 119.97350 * 180.02562 * 5 4 3 34 34 H 1.09000 * 113.61296 * 25.43391 * 9 7 6 35 35 H 1.09002 * 113.61240 * 254.52567 * 9 7 6 36 36 H 0.97003 * 120.00044 * 72.49973 * 12 10 9 37 37 H 1.08002 * 119.92438 * 179.97438 * 18 16 15 38 38 H 1.09005 * 109.46879 * 254.99139 * 20 19 18 39 39 H 0.96695 * 114.00361 * 60.00824 * 21 20 19 40 40 H 1.48501 * 110.00441 * 179.97438 * 22 20 19 41 41 H 1.48504 * 109.99795 * 301.31401 * 22 20 19 42 42 H 1.07997 * 120.08173 * 179.70355 * 25 23 19 43 43 H 1.09002 * 113.61810 * 139.98555 * 26 10 9 44 44 H 1.09001 * 113.61297 * 270.88051 * 26 10 9 45 45 H 1.07999 * 119.97241 * 179.72797 * 27 6 5 46 46 H 1.08004 * 120.02470 * 180.27515 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4313 1.2847 0.0005 5 6 4.0561 2.5168 0.0000 6 6 3.3019 3.6757 -0.0016 7 6 3.9861 5.0185 -0.0016 8 1 5.0565 4.9481 -0.1954 9 6 3.2707 6.0744 -0.8608 10 6 3.5926 7.0847 0.2530 11 1 4.5550 7.5813 0.1291 12 7 2.5005 8.0213 0.5293 13 6 2.6048 9.3096 0.1474 14 8 3.6049 9.6943 -0.4268 15 6 1.5035 10.2537 0.4255 16 6 1.6081 11.5907 0.0302 17 9 2.7171 12.0234 -0.6085 18 6 0.5729 12.4692 0.2945 19 6 -0.5597 12.0292 0.9526 20 6 -1.6807 12.9937 1.2425 21 8 -1.5077 14.1750 0.4573 22 14 -3.3104 12.1980 0.8164 23 6 -0.6721 10.7033 1.3421 24 9 -1.7858 10.2804 1.9795 25 6 0.3532 9.8152 1.0849 26 6 3.6367 5.8880 1.2177 27 6 1.9211 3.6047 0.0032 28 6 1.2916 2.3751 -0.0020 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3634 -1.0277 0.0005 32 1 4.0208 0.3799 0.0017 33 1 5.1345 2.5750 0.0000 34 1 2.2042 5.8865 -0.9850 35 1 3.7767 6.2868 -1.8025 36 1 1.7024 7.7143 0.9872 37 1 0.6523 13.5024 -0.0098 38 1 -1.6700 13.2558 2.3005 39 1 -1.5072 14.0168 -0.4966 40 1 -4.4242 13.1388 1.0984 41 1 -3.3256 11.8071 -0.6162 42 1 0.2661 8.7838 1.3932 43 1 4.4381 5.9499 1.9540 44 1 2.6703 5.6492 1.6617 45 1 1.3343 4.5114 0.0064 46 1 0.2129 2.3202 -0.0028 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_12360598.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:18:58 Heat of formation + Delta-G solvation = -104.676975 kcal Electronic energy + Delta-G solvation = -33138.027974 eV Core-core repulsion = 28210.801704 eV Total energy + Delta-G solvation = -4927.226270 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -50.49379 -49.99274 -41.76443 -41.12669 -40.37614 -39.53283 -37.96585 -37.73486 -34.88237 -33.07346 -32.07298 -31.52951 -31.13683 -28.49819 -28.03188 -26.82302 -25.78089 -24.32667 -24.03909 -23.56279 -22.40279 -21.74990 -20.70149 -19.48861 -19.21773 -19.10014 -18.59180 -18.02439 -17.65183 -17.45575 -17.24330 -17.02427 -16.69998 -16.65980 -16.24909 -16.17436 -15.99230 -15.80691 -15.73798 -15.67079 -15.46957 -14.96083 -14.70230 -14.47920 -14.39531 -14.17952 -14.12075 -13.88090 -13.61705 -13.39949 -13.27672 -13.13003 -13.02166 -12.85772 -12.67515 -12.46702 -12.20602 -12.06987 -11.69348 -11.65913 -11.51379 -11.27118 -11.02181 -10.35289 -10.17886 -9.97939 -9.81596 -9.02738 -4.88825 -0.83572 -0.38696 0.36405 0.40849 1.01232 1.44120 1.51560 1.83518 1.87201 2.26177 2.31297 2.64713 2.71284 2.74788 2.96198 3.05097 3.29609 3.33941 3.46281 3.59541 3.62158 3.70453 3.79507 3.85574 3.91270 4.04493 4.07611 4.13307 4.17410 4.24656 4.29047 4.34234 4.42225 4.49081 4.52365 4.56963 4.61138 4.63869 4.63888 4.65315 4.73597 4.85932 4.92762 5.02391 5.07438 5.30009 5.31840 5.37403 5.42155 5.66714 5.77797 6.11842 6.26880 6.41591 7.00804 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.108 4.108 7 C -0.064 4.064 8 H 0.104 0.896 9 C -0.146 4.146 10 C 0.122 3.878 11 H 0.121 0.879 12 N -0.713 5.713 13 C 0.561 3.439 14 O -0.514 6.514 15 C -0.152 4.152 16 C 0.163 3.837 17 F -0.105 7.105 18 C -0.130 4.130 19 C -0.090 4.090 20 C -0.080 4.080 21 O -0.526 6.526 22 Si 0.682 3.318 23 C 0.079 3.921 24 F -0.101 7.101 25 C -0.083 4.083 26 C -0.136 4.136 27 C -0.077 4.077 28 C -0.206 4.206 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.101 0.899 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.089 0.911 35 H 0.077 0.923 36 H 0.400 0.600 37 H 0.161 0.839 38 H 0.135 0.865 39 H 0.379 0.621 40 H -0.246 1.246 41 H -0.254 1.254 42 H 0.153 0.847 43 H 0.080 0.920 44 H 0.089 0.911 45 H 0.123 0.877 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.962 -3.567 2.489 5.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.079 3.921 4 C -0.168 4.168 5 C -0.092 4.092 6 C -0.108 4.108 7 C -0.083 4.083 8 H 0.122 0.878 9 C -0.184 4.184 10 C 0.018 3.982 11 H 0.138 0.862 12 N -0.365 5.365 13 C 0.347 3.653 14 O -0.390 6.390 15 C -0.156 4.156 16 C 0.142 3.858 17 F -0.083 7.083 18 C -0.148 4.148 19 C -0.092 4.092 20 C -0.189 4.189 21 O -0.332 6.332 22 Si 0.580 3.420 23 C 0.059 3.941 24 F -0.079 7.079 25 C -0.102 4.102 26 C -0.174 4.174 27 C -0.095 4.095 28 C -0.224 4.224 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.120 0.880 32 H 0.149 0.851 33 H 0.148 0.852 34 H 0.107 0.893 35 H 0.096 0.904 36 H 0.236 0.764 37 H 0.179 0.821 38 H 0.153 0.847 39 H 0.227 0.773 40 H -0.171 1.171 41 H -0.178 1.178 42 H 0.171 0.829 43 H 0.099 0.901 44 H 0.107 0.893 45 H 0.141 0.859 46 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -3.833 -3.158 2.157 5.415 hybrid contribution -0.103 0.535 -0.608 0.816 sum -3.936 -2.623 1.549 4.977 Atomic orbital electron populations 1.23084 0.78122 1.04228 1.01384 1.86089 1.21593 1.26908 1.88572 1.19090 0.92448 0.84261 0.96313 1.20472 0.91446 0.98821 1.06023 1.20890 0.99935 0.90919 0.97453 1.19511 0.93322 0.94280 1.03690 1.21237 0.99995 0.90264 0.96793 0.87825 1.23635 1.01613 0.94674 0.98493 1.22636 0.91790 0.87521 0.96302 0.86163 1.45860 1.21301 1.08827 1.60504 1.17862 0.86176 0.82088 0.79144 1.90891 1.30479 1.77337 1.40266 1.19882 0.96702 0.93669 1.05381 1.17638 0.84001 0.91030 0.93115 1.91654 1.49343 1.89487 1.77808 1.20866 0.91459 1.01442 1.01076 1.20464 0.97230 0.93525 0.97974 1.25092 1.04520 0.88746 1.00493 1.86619 1.94717 1.30041 1.21856 0.94576 0.75350 0.87072 0.84976 1.17082 0.85106 0.92035 0.99859 1.91203 1.48261 1.89450 1.79034 1.21089 0.91135 1.00469 0.97504 1.23482 1.03134 0.93967 0.96860 1.20744 0.93963 0.96886 0.97866 1.21233 1.00109 0.92319 1.08769 0.92563 0.92567 0.88043 0.85091 0.85207 0.89269 0.90384 0.76405 0.82126 0.84740 0.77257 1.17074 1.17805 0.82906 0.90081 0.89260 0.85896 0.85432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.60 10.50 -19.43 -0.20 -0.80 16 3 C 0.12 0.20 6.69 -39.22 -0.26 -0.06 16 4 C -0.15 -0.17 9.99 -39.43 -0.39 -0.57 16 5 C -0.07 0.00 9.70 -39.61 -0.38 -0.38 16 6 C -0.11 0.06 5.29 -104.60 -0.55 -0.49 16 7 C -0.06 0.13 3.98 -90.96 -0.36 -0.23 16 8 H 0.10 -0.25 8.09 -51.93 -0.42 -0.67 16 9 C -0.15 0.24 7.25 -25.92 -0.19 0.06 16 10 C 0.12 -0.18 4.24 -67.12 -0.28 -0.46 16 11 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 12 N -0.71 1.21 5.31 -54.01 -0.29 0.92 16 13 C 0.56 0.90 7.77 -12.40 -0.10 0.80 16 14 O -0.51 -3.00 14.94 5.30 0.08 -2.92 16 15 C -0.15 -0.01 5.88 -104.92 -0.62 -0.63 16 16 C 0.16 0.21 7.28 -38.97 -0.28 -0.08 16 17 F -0.11 -0.43 15.55 2.25 0.04 -0.39 16 18 C -0.13 0.08 9.20 -39.57 -0.36 -0.28 16 19 C -0.09 0.13 5.14 -104.49 -0.54 -0.40 16 20 C -0.08 0.13 2.97 36.01 0.11 0.24 16 21 O -0.53 0.34 11.63 -35.23 -0.41 -0.07 16 22 Si 0.68 -1.00 29.54 -169.99 -5.02 -6.02 16 23 C 0.08 -0.17 6.65 -39.49 -0.26 -0.44 16 24 F -0.10 0.30 13.67 2.25 0.03 0.33 16 25 C -0.08 0.22 9.52 -39.12 -0.37 -0.15 16 26 C -0.14 0.38 7.30 -25.92 -0.19 0.19 16 27 C -0.08 0.06 8.59 -39.61 -0.34 -0.28 16 28 C -0.21 -0.02 9.04 -39.44 -0.36 -0.38 16 29 H 0.06 -0.15 7.67 -51.93 -0.40 -0.54 16 30 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 31 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 32 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 33 H 0.13 -0.24 8.05 -52.48 -0.42 -0.66 16 34 H 0.09 -0.20 6.32 -51.93 -0.33 -0.52 16 35 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 36 H 0.40 -1.87 6.76 -40.82 -0.28 -2.15 16 37 H 0.16 -0.26 7.06 -52.49 -0.37 -0.63 16 38 H 0.14 -0.34 7.96 -51.93 -0.41 -0.75 16 39 H 0.38 -1.37 8.42 45.56 0.38 -0.99 16 40 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 41 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 42 H 0.15 -0.90 6.40 -52.49 -0.34 -1.24 16 43 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 44 H 0.09 -0.32 7.69 -51.93 -0.40 -0.72 16 45 H 0.12 -0.34 6.67 -52.49 -0.35 -0.69 16 46 H 0.13 -0.21 6.30 -52.48 -0.33 -0.54 16 LS Contribution 386.61 15.07 5.83 5.83 Total: 0.00 -8.65 386.61 -10.03 -18.69 By element: Atomic # 1 Polarization: -7.63 SS G_CDS: -5.33 Total: -12.97 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -4.75 Total: -2.59 kcal Atomic # 7 Polarization: 1.21 SS G_CDS: -0.29 Total: 0.92 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.53 Total: -3.80 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.07 Total: -0.06 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.02 Total: -6.02 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -8.65 -10.03 -18.69 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_12360598.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.990 kcal (2) G-P(sol) polarization free energy of solvation -8.653 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.687 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.677 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds