Wall clock time and date at job start Sun Mar 7 2021 05:18:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35901 * 117.00119 * 2 1 4 4 C 1.38734 * 120.05340 * 179.97438 * 3 2 1 5 5 C 1.38142 * 119.93899 * 179.97438 * 4 3 2 6 6 C 1.38262 * 120.05944 * 359.97438 * 5 4 3 7 7 C 1.50703 * 119.94549 * 179.97438 * 6 5 4 8 8 H 1.09001 * 112.85069 * 11.20090 * 7 6 5 9 9 C 1.53784 * 113.61270 * 142.50620 * 7 6 5 10 10 C 1.53784 * 87.08238 * 139.98107 * 9 7 6 11 11 H 1.09005 * 113.69077 * 89.12161 * 10 9 7 12 12 N 1.46498 * 113.61657 * 220.01757 * 10 9 7 13 13 C 1.34774 * 119.99946 * 252.49563 * 12 10 9 14 14 O 1.21569 * 120.00124 * 0.02562 * 13 12 10 15 15 C 1.47695 * 119.99624 * 179.97438 * 13 12 10 16 16 C 1.39808 * 120.15218 * 180.02562 * 15 13 12 17 17 F 1.35099 * 120.08642 * 0.04167 * 16 15 13 18 18 C 1.38315 * 119.83134 * 180.02562 * 16 15 13 19 19 C 1.38185 * 120.14304 * 0.28121 * 18 16 15 20 20 C 1.50699 * 119.83826 * 179.72634 * 19 18 16 21 21 O 1.42894 * 109.47340 * 14.99127 * 20 19 18 22 22 Si 1.86296 * 109.47371 * 134.99712 * 20 19 18 23 23 C 1.38655 * 120.31416 * 359.43909 * 19 18 16 24 24 F 1.35103 * 119.91550 * 180.30712 * 23 19 18 25 25 C 1.38061 * 120.16989 * 0.55904 * 23 19 18 26 26 C 1.53781 * 87.08003 * 334.56933 * 10 9 7 27 27 C 1.38266 * 120.11081 * 0.28105 * 6 5 4 28 28 C 1.38142 * 120.05243 * 359.44377 * 27 6 5 29 29 H 1.09001 * 109.47307 * 300.00024 * 1 2 3 30 30 H 1.08997 * 109.47071 * 59.99793 * 1 2 3 31 31 H 1.09004 * 109.47195 * 180.02562 * 1 2 3 32 32 H 1.07995 * 120.03082 * 359.95623 * 4 3 2 33 33 H 1.08003 * 119.97350 * 180.02562 * 5 4 3 34 34 H 1.09000 * 113.61296 * 25.43391 * 9 7 6 35 35 H 1.09002 * 113.61240 * 254.52567 * 9 7 6 36 36 H 0.97003 * 120.00044 * 72.49973 * 12 10 9 37 37 H 1.08002 * 119.92438 * 179.97438 * 18 16 15 38 38 H 1.09005 * 109.46879 * 254.99139 * 20 19 18 39 39 H 0.96695 * 114.00361 * 60.00824 * 21 20 19 40 40 H 1.48501 * 110.00441 * 179.97438 * 22 20 19 41 41 H 1.48504 * 109.99795 * 301.31401 * 22 20 19 42 42 H 1.07997 * 120.08173 * 179.70355 * 25 23 19 43 43 H 1.09002 * 113.61810 * 139.98555 * 26 10 9 44 44 H 1.09001 * 113.61297 * 270.88051 * 26 10 9 45 45 H 1.07999 * 119.97241 * 179.72797 * 27 6 5 46 46 H 1.08004 * 120.02470 * 180.27515 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4313 1.2847 0.0005 5 6 4.0561 2.5168 0.0000 6 6 3.3019 3.6757 -0.0016 7 6 3.9861 5.0185 -0.0016 8 1 5.0565 4.9481 -0.1954 9 6 3.2707 6.0744 -0.8608 10 6 3.5926 7.0847 0.2530 11 1 4.5550 7.5813 0.1291 12 7 2.5005 8.0213 0.5293 13 6 2.6048 9.3096 0.1474 14 8 3.6049 9.6943 -0.4268 15 6 1.5035 10.2537 0.4255 16 6 1.6081 11.5907 0.0302 17 9 2.7171 12.0234 -0.6085 18 6 0.5729 12.4692 0.2945 19 6 -0.5597 12.0292 0.9526 20 6 -1.6807 12.9937 1.2425 21 8 -1.5077 14.1750 0.4573 22 14 -3.3104 12.1980 0.8164 23 6 -0.6721 10.7033 1.3421 24 9 -1.7858 10.2804 1.9795 25 6 0.3532 9.8152 1.0849 26 6 3.6367 5.8880 1.2177 27 6 1.9211 3.6047 0.0032 28 6 1.2916 2.3751 -0.0020 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3634 -1.0277 0.0005 32 1 4.0208 0.3799 0.0017 33 1 5.1345 2.5750 0.0000 34 1 2.2042 5.8865 -0.9850 35 1 3.7767 6.2868 -1.8025 36 1 1.7024 7.7143 0.9872 37 1 0.6523 13.5024 -0.0098 38 1 -1.6700 13.2558 2.3005 39 1 -1.5072 14.0168 -0.4966 40 1 -4.4242 13.1388 1.0984 41 1 -3.3256 11.8071 -0.6162 42 1 0.2661 8.7838 1.3932 43 1 4.4381 5.9499 1.9540 44 1 2.6703 5.6492 1.6617 45 1 1.3343 4.5114 0.0064 46 1 0.2129 2.3202 -0.0028 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100430_12360598.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:18:56 Heat of formation + Delta-G solvation = -102.076290 kcal Electronic energy + Delta-G solvation = -33137.915200 eV Core-core repulsion = 28210.801704 eV Total energy + Delta-G solvation = -4927.113496 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -50.29830 -50.11293 -41.71691 -41.09345 -40.29182 -39.52985 -37.89215 -37.70119 -34.90339 -32.98632 -32.00728 -31.43961 -31.06842 -28.38455 -27.93888 -26.65530 -25.69918 -24.20061 -23.98411 -23.50470 -22.33819 -21.74239 -20.59239 -19.39279 -19.16191 -19.04032 -18.53648 -17.96567 -17.60135 -17.37475 -17.19586 -16.95274 -16.66783 -16.63677 -16.18921 -16.08697 -15.92050 -15.76166 -15.69271 -15.67405 -15.34619 -14.88137 -14.61184 -14.45865 -14.34001 -14.12560 -14.06696 -13.83074 -13.42318 -13.31269 -13.21354 -13.01629 -12.94119 -12.75271 -12.63402 -12.36226 -12.11266 -12.06182 -11.62189 -11.53938 -11.41852 -11.21608 -11.06886 -10.28452 -10.11959 -9.93155 -9.73914 -8.99202 -4.80217 -0.77583 -0.27152 0.41348 0.44297 1.10266 1.47147 1.56686 1.88955 1.92506 2.29314 2.40909 2.76112 2.76992 2.83982 3.11720 3.16495 3.44378 3.47877 3.56176 3.72764 3.74999 3.83095 3.91429 3.98223 4.03142 4.18462 4.24238 4.29112 4.36640 4.37936 4.42520 4.44613 4.52064 4.59716 4.68244 4.73636 4.74636 4.75545 4.76968 4.79000 4.87004 4.99097 5.07636 5.10860 5.17176 5.35280 5.40815 5.42868 5.53596 5.74396 5.86264 6.34651 6.36840 6.46881 7.03716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.343 6.343 3 C 0.102 3.898 4 C -0.170 4.170 5 C -0.082 4.082 6 C -0.110 4.110 7 C -0.061 4.061 8 H 0.105 0.895 9 C -0.142 4.142 10 C 0.118 3.882 11 H 0.099 0.901 12 N -0.694 5.694 13 C 0.558 3.442 14 O -0.567 6.567 15 C -0.159 4.159 16 C 0.134 3.866 17 F -0.130 7.130 18 C -0.128 4.128 19 C -0.089 4.089 20 C -0.081 4.081 21 O -0.542 6.542 22 Si 0.749 3.251 23 C 0.086 3.914 24 F -0.090 7.090 25 C -0.065 4.065 26 C -0.123 4.123 27 C -0.078 4.078 28 C -0.210 4.210 29 H 0.066 0.934 30 H 0.063 0.937 31 H 0.112 0.888 32 H 0.128 0.872 33 H 0.142 0.858 34 H 0.101 0.899 35 H 0.064 0.936 36 H 0.418 0.582 37 H 0.165 0.835 38 H 0.147 0.853 39 H 0.390 0.610 40 H -0.289 1.289 41 H -0.283 1.283 42 H 0.191 0.809 43 H 0.083 0.917 44 H 0.106 0.894 45 H 0.147 0.853 46 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.527 -4.124 3.744 7.847 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.257 6.257 3 C 0.057 3.943 4 C -0.188 4.188 5 C -0.100 4.100 6 C -0.110 4.110 7 C -0.080 4.080 8 H 0.123 0.877 9 C -0.181 4.181 10 C 0.013 3.987 11 H 0.117 0.883 12 N -0.346 5.346 13 C 0.345 3.655 14 O -0.447 6.447 15 C -0.163 4.163 16 C 0.114 3.886 17 F -0.108 7.108 18 C -0.147 4.147 19 C -0.091 4.091 20 C -0.190 4.190 21 O -0.350 6.350 22 Si 0.652 3.348 23 C 0.066 3.934 24 F -0.069 7.069 25 C -0.084 4.084 26 C -0.160 4.160 27 C -0.095 4.095 28 C -0.229 4.229 29 H 0.084 0.916 30 H 0.082 0.918 31 H 0.130 0.870 32 H 0.146 0.854 33 H 0.160 0.840 34 H 0.119 0.881 35 H 0.082 0.918 36 H 0.257 0.743 37 H 0.182 0.818 38 H 0.165 0.835 39 H 0.240 0.760 40 H -0.217 1.217 41 H -0.209 1.209 42 H 0.208 0.792 43 H 0.102 0.898 44 H 0.124 0.876 45 H 0.165 0.835 46 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -5.418 -3.757 3.437 7.435 hybrid contribution 0.293 0.714 -1.014 1.275 sum -5.125 -3.043 2.423 6.434 Atomic orbital electron populations 1.23293 0.76623 1.05316 1.02222 1.86047 1.23338 1.27485 1.88832 1.19349 0.92843 0.84801 0.97269 1.20644 0.91790 0.99346 1.07036 1.21106 1.00771 0.90822 0.97308 1.19683 0.93659 0.94473 1.03171 1.21215 1.00007 0.89567 0.97234 0.87699 1.23627 1.02168 0.94503 0.97777 1.22584 0.91066 0.87668 0.97380 0.88330 1.45734 1.21797 1.07692 1.59380 1.18137 0.85826 0.83012 0.78514 1.90866 1.32554 1.78358 1.42893 1.19847 0.97295 0.92918 1.06286 1.17992 0.83999 0.92179 0.94447 1.91585 1.50758 1.89849 1.78651 1.20859 0.91265 1.01444 1.01087 1.20509 0.96817 0.94084 0.97698 1.25200 1.04151 0.88454 1.01150 1.86592 1.94677 1.30763 1.23008 0.93944 0.73131 0.85177 0.82558 1.17074 0.85361 0.91673 0.99261 1.91233 1.47684 1.89257 1.78684 1.21357 0.89426 1.02029 0.95610 1.23437 1.04112 0.92214 0.96285 1.21041 0.94059 0.97494 0.96931 1.21471 1.00975 0.92094 1.08356 0.91560 0.91805 0.86959 0.85374 0.84030 0.88115 0.91758 0.74323 0.81766 0.83536 0.75964 1.21669 1.20894 0.79215 0.89828 0.87573 0.83491 0.83835 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.34 -1.51 10.50 -92.44 -0.97 -2.48 16 3 C 0.10 0.37 6.69 22.51 0.15 0.52 16 4 C -0.17 -0.54 9.99 22.37 0.22 -0.31 16 5 C -0.08 0.00 9.70 22.25 0.22 0.21 16 6 C -0.11 0.23 5.29 -19.85 -0.11 0.13 16 7 C -0.06 0.30 3.98 -11.01 -0.04 0.26 16 8 H 0.10 -0.53 8.09 -2.39 -0.02 -0.55 16 9 C -0.14 0.57 7.25 31.12 0.23 0.80 16 10 C 0.12 -0.39 4.24 45.52 0.19 -0.20 16 11 H 0.10 0.17 7.46 -2.38 -0.02 0.15 16 12 N -0.69 3.15 5.31 -443.05 -2.35 0.80 16 13 C 0.56 1.95 7.77 86.74 0.67 2.63 16 14 O -0.57 -7.76 14.94 -3.93 -0.06 -7.82 16 15 C -0.16 0.02 5.88 -20.06 -0.12 -0.10 16 16 C 0.13 0.48 7.28 22.67 0.17 0.64 16 17 F -0.13 -1.38 15.55 44.97 0.70 -0.68 16 18 C -0.13 0.13 9.20 22.28 0.20 0.34 16 19 C -0.09 0.35 5.14 -19.78 -0.10 0.25 16 20 C -0.08 0.35 2.97 71.24 0.21 0.56 16 21 O -0.54 0.87 11.63 -148.98 -1.73 -0.86 16 22 Si 0.75 -2.65 29.54 68.60 2.03 -0.62 16 23 C 0.09 -0.56 6.65 22.33 0.15 -0.42 16 24 F -0.09 0.80 13.67 44.97 0.61 1.41 16 25 C -0.07 0.50 9.52 22.57 0.21 0.72 16 26 C -0.12 0.88 7.30 31.12 0.23 1.11 16 27 C -0.08 0.25 8.59 22.25 0.19 0.44 16 28 C -0.21 0.15 9.04 22.36 0.20 0.35 16 29 H 0.07 -0.39 7.67 -2.39 -0.02 -0.41 16 30 H 0.06 -0.35 7.66 -2.39 -0.02 -0.37 16 31 H 0.11 -0.72 8.14 -2.38 -0.02 -0.74 16 32 H 0.13 0.30 8.06 -2.91 -0.02 0.28 16 33 H 0.14 -0.49 8.05 -2.91 -0.02 -0.51 16 34 H 0.10 -0.64 6.32 -2.39 -0.02 -0.66 16 35 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 36 H 0.42 -5.10 6.76 -92.71 -0.63 -5.73 16 37 H 0.16 -0.41 7.06 -2.91 -0.02 -0.43 16 38 H 0.15 -0.96 7.96 -2.38 -0.02 -0.98 16 39 H 0.39 -2.83 8.42 -74.06 -0.62 -3.45 16 40 H -0.29 -1.05 7.11 99.48 0.71 -0.34 16 41 H -0.28 -0.35 7.11 99.48 0.71 0.36 16 42 H 0.19 -3.02 6.40 -2.91 -0.02 -3.04 16 43 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 44 H 0.11 -1.09 7.69 -2.39 -0.02 -1.11 16 45 H 0.15 -1.27 6.67 -2.91 -0.02 -1.29 16 46 H 0.14 -0.69 6.30 -2.91 -0.02 -0.71 16 Total: 0.00 -23.55 386.61 2.07 -21.48 By element: Atomic # 1 Polarization: -20.05 SS G_CDS: -0.14 Total: -20.20 kcal Atomic # 6 Polarization: 4.97 SS G_CDS: 3.99 Total: 8.96 kcal Atomic # 7 Polarization: 3.15 SS G_CDS: -2.35 Total: 0.80 kcal Atomic # 8 Polarization: -8.39 SS G_CDS: -2.76 Total: -11.15 kcal Atomic # 9 Polarization: -0.58 SS G_CDS: 1.31 Total: 0.74 kcal Atomic # 14 Polarization: -2.65 SS G_CDS: 2.03 Total: -0.62 kcal Total: -23.55 2.07 -21.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_12360598.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.596 kcal (2) G-P(sol) polarization free energy of solvation -23.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.074 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.481 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.076 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds