Wall clock time and date at job start Sun Mar 7 2021 05:19:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35897 * 117.00197 * 2 1 4 4 C 1.38737 * 120.05795 * 180.02562 * 3 2 1 5 5 C 1.38140 * 119.94629 * 179.97438 * 4 3 2 6 6 C 1.38265 * 120.05543 * 359.97438 * 5 4 3 7 7 C 1.50695 * 119.94301 * 180.02562 * 6 5 4 8 8 H 1.08994 * 112.85506 * 348.80259 * 7 6 5 9 9 C 1.53787 * 113.61623 * 119.99927 * 7 6 5 10 10 C 1.53790 * 87.08146 * 140.06269 * 9 7 6 11 11 H 1.09000 * 113.61264 * 89.20383 * 10 9 7 12 12 N 1.46498 * 113.61410 * 220.02054 * 10 9 7 13 13 C 1.34775 * 120.00034 * 205.00184 * 12 10 9 14 14 O 1.21591 * 119.99660 * 0.02562 * 13 12 10 15 15 C 1.47530 * 120.00298 * 180.02562 * 13 12 10 16 16 C 1.40139 * 120.19496 * 179.97438 * 15 13 12 17 17 O 1.35650 * 120.14849 * 359.97438 * 16 15 13 18 18 C 1.42894 * 117.00294 * 180.02562 * 17 16 15 19 19 C 1.38707 * 119.70092 * 180.02562 * 16 15 13 20 20 C 1.38055 * 120.08354 * 359.72104 * 19 16 15 21 21 C 1.38546 * 120.39123 * 0.55713 * 20 19 16 22 22 C 1.50696 * 119.85216 * 179.71673 * 21 20 19 23 23 O 1.42903 * 109.47131 * 119.72165 * 22 21 20 24 24 Si 1.86305 * 109.47185 * 359.72706 * 22 21 20 25 25 C 1.37786 * 120.29894 * 359.44235 * 21 20 19 26 26 C 1.53781 * 87.08142 * 334.56871 * 10 9 7 27 27 C 1.38267 * 120.11210 * 0.27804 * 6 5 4 28 28 C 1.38140 * 120.05503 * 359.44812 * 27 6 5 29 29 H 1.08993 * 109.47056 * 180.02562 * 1 2 3 30 30 H 1.08999 * 109.47053 * 300.00770 * 1 2 3 31 31 H 1.08996 * 109.46786 * 60.00412 * 1 2 3 32 32 H 1.08002 * 120.02327 * 359.97438 * 4 3 2 33 33 H 1.08002 * 119.97577 * 180.02562 * 5 4 3 34 34 H 1.09002 * 113.61336 * 25.51786 * 9 7 6 35 35 H 1.08995 * 113.61804 * 254.61117 * 9 7 6 36 36 H 0.96999 * 120.00214 * 25.00214 * 12 10 9 37 37 H 1.09003 * 109.47021 * 60.00040 * 18 17 16 38 38 H 1.09000 * 109.47639 * 180.02562 * 18 17 16 39 39 H 1.09003 * 109.46947 * 300.00482 * 18 17 16 40 40 H 1.07998 * 119.95794 * 180.02562 * 19 16 15 41 41 H 1.08006 * 119.80549 * 180.27023 * 20 19 16 42 42 H 1.08999 * 109.47358 * 239.72525 * 22 21 20 43 43 H 0.96700 * 114.00311 * 300.00591 * 23 22 21 44 44 H 1.48497 * 110.00233 * 179.97438 * 24 22 21 45 45 H 1.48492 * 109.99800 * 301.31995 * 24 22 21 46 46 H 1.08001 * 120.04552 * 180.29530 * 25 21 20 47 47 H 1.08999 * 113.61385 * 139.97988 * 26 10 9 48 48 H 1.08995 * 113.61650 * 270.88312 * 26 10 9 49 49 H 1.07996 * 119.97409 * 179.72995 * 27 6 5 50 50 H 1.08000 * 120.03106 * 180.27602 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4314 1.2848 -0.0005 5 6 4.0562 2.5168 -0.0011 6 6 3.3021 3.6757 -0.0016 7 6 3.9863 5.0184 -0.0028 8 1 5.0564 4.9484 0.1919 9 6 3.6379 5.8863 -1.2236 10 6 3.5952 7.0847 -0.2607 11 1 4.5581 7.5804 -0.1376 12 7 2.5042 8.0222 -0.5385 13 6 2.6100 9.3109 -0.1586 14 8 3.6111 9.6957 0.4142 15 6 1.5111 10.2549 -0.4378 16 6 1.6166 11.5957 -0.0442 17 8 2.7299 12.0322 0.5962 18 6 2.7661 13.4116 0.9675 19 6 0.5770 12.4743 -0.3114 20 6 -0.5534 12.0297 -0.9674 21 6 -0.6640 10.7036 -1.3532 22 6 -1.9061 10.2299 -2.0629 23 8 -1.5541 9.7224 -3.3516 24 14 -3.0907 11.6544 -2.2589 25 6 0.3590 9.8171 -1.0958 26 6 3.2721 6.0766 0.8547 27 6 1.9212 3.6047 0.0042 28 6 1.2916 2.3752 -0.0010 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 4.0209 0.3798 -0.0005 33 1 5.1347 2.5750 -0.0019 34 1 2.6711 5.6480 -1.6671 35 1 4.4393 5.9462 -1.9598 36 1 1.7057 7.7153 -0.9958 37 1 1.9369 13.6284 1.6409 38 1 3.7088 13.6281 1.4700 39 1 2.6802 14.0306 0.0744 40 1 0.6541 13.5085 -0.0102 41 1 -1.3583 12.7186 -1.1771 42 1 -2.3799 9.4411 -1.4787 43 1 -1.1268 10.3718 -3.9268 44 1 -4.3197 11.2005 -2.9581 45 1 -3.4397 12.2116 -0.9275 46 1 0.2704 8.7854 -1.4026 47 1 3.7784 6.2899 1.7961 48 1 2.2055 5.8902 0.9793 49 1 1.3344 4.5113 0.0082 50 1 0.2130 2.3202 -0.0009 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_12496546.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:19:02 Heat of formation + Delta-G solvation = -52.532222 kcal Electronic energy + Delta-G solvation = -32774.624836 eV Core-core repulsion = 28314.347872 eV Total energy + Delta-G solvation = -4460.276964 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -41.83568 -41.35425 -40.49183 -39.32445 -39.20235 -37.74551 -37.17589 -34.56866 -32.63112 -32.01255 -31.86841 -30.99742 -28.64556 -28.32103 -26.70400 -26.23298 -26.12170 -24.73471 -23.69355 -22.83343 -22.00637 -21.38701 -20.45582 -19.40976 -19.13283 -18.39216 -18.10767 -17.65848 -17.13989 -16.85319 -16.84200 -16.65175 -16.31440 -16.10210 -15.96672 -15.91273 -15.74827 -15.52415 -15.24317 -14.64740 -14.63875 -14.59152 -14.36512 -14.29189 -14.07924 -13.70182 -13.54987 -13.49125 -13.21538 -13.14995 -13.02018 -12.77206 -12.45576 -12.34947 -12.16596 -12.11504 -12.10333 -11.84442 -11.61568 -11.54804 -11.40254 -10.79819 -10.44129 -10.24166 -9.92816 -9.90622 -9.28598 -8.96509 -5.13363 -0.26115 0.17827 0.42269 0.47119 1.19744 1.53145 1.86388 1.89710 2.19360 2.22330 2.35957 2.71812 2.78342 3.33836 3.45173 3.50790 3.59077 3.64748 3.71283 3.74462 3.86566 3.93587 3.95325 3.99323 4.05622 4.14496 4.18441 4.19118 4.21367 4.21433 4.32878 4.40838 4.45070 4.49428 4.55014 4.56035 4.61428 4.68802 4.69321 4.74641 4.82069 4.86975 4.98034 5.02675 5.05517 5.11740 5.20274 5.22419 5.38313 5.44160 5.48171 5.61899 5.74343 5.83564 6.28142 6.46593 6.47665 6.59330 7.37177 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.123 3.877 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.106 4.106 7 C -0.065 4.065 8 H 0.103 0.897 9 C -0.137 4.137 10 C 0.125 3.875 11 H 0.118 0.882 12 N -0.720 5.720 13 C 0.562 3.438 14 O -0.516 6.516 15 C -0.175 4.175 16 C 0.193 3.807 17 O -0.279 6.279 18 C 0.019 3.981 19 C -0.214 4.214 20 C -0.048 4.048 21 C -0.169 4.169 22 C -0.062 4.062 23 O -0.541 6.541 24 Si 0.686 3.314 25 C -0.020 4.020 26 C -0.146 4.146 27 C -0.076 4.076 28 C -0.206 4.206 29 H 0.101 0.899 30 H 0.055 0.945 31 H 0.056 0.944 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.088 0.912 35 H 0.079 0.921 36 H 0.398 0.602 37 H 0.058 0.942 38 H 0.105 0.895 39 H 0.059 0.941 40 H 0.141 0.859 41 H 0.134 0.866 42 H 0.114 0.886 43 H 0.380 0.620 44 H -0.253 1.253 45 H -0.257 1.257 46 H 0.135 0.865 47 H 0.076 0.924 48 H 0.087 0.913 49 H 0.123 0.877 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.801 2.981 -2.255 4.670 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.078 3.922 4 C -0.168 4.168 5 C -0.093 4.093 6 C -0.107 4.107 7 C -0.084 4.084 8 H 0.121 0.879 9 C -0.175 4.175 10 C 0.020 3.980 11 H 0.136 0.864 12 N -0.373 5.373 13 C 0.350 3.650 14 O -0.391 6.391 15 C -0.179 4.179 16 C 0.144 3.856 17 O -0.189 6.189 18 C -0.076 4.076 19 C -0.232 4.232 20 C -0.066 4.066 21 C -0.170 4.170 22 C -0.173 4.173 23 O -0.346 6.346 24 Si 0.588 3.412 25 C -0.039 4.039 26 C -0.185 4.185 27 C -0.094 4.094 28 C -0.224 4.224 29 H 0.119 0.881 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.149 0.851 33 H 0.148 0.852 34 H 0.106 0.894 35 H 0.098 0.902 36 H 0.234 0.766 37 H 0.076 0.924 38 H 0.124 0.876 39 H 0.077 0.923 40 H 0.159 0.841 41 H 0.151 0.849 42 H 0.132 0.868 43 H 0.227 0.773 44 H -0.178 1.178 45 H -0.182 1.182 46 H 0.153 0.847 47 H 0.095 0.905 48 H 0.106 0.894 49 H 0.141 0.859 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.859 2.758 -1.337 4.191 hybrid contribution -0.709 -0.265 0.193 0.781 sum -3.568 2.493 -1.144 4.500 Atomic orbital electron populations 1.23077 0.78169 1.04179 1.01382 1.86083 1.21553 1.26927 1.88617 1.19085 0.92448 0.84228 0.96442 1.20463 0.91418 0.98799 1.06104 1.20888 0.99916 0.90914 0.97532 1.19530 0.93313 0.94344 1.03474 1.21243 0.99908 0.90221 0.96986 0.87918 1.23474 1.02993 0.94209 0.96796 1.22528 0.92039 0.87549 0.95889 0.86388 1.45892 1.21099 1.09071 1.61191 1.17980 0.86517 0.81774 0.78773 1.90842 1.30609 1.77321 1.40369 1.19365 0.97392 0.92203 1.08916 1.19098 0.85850 0.91733 0.88938 1.86383 1.35280 1.27471 1.69776 1.23238 1.04126 0.79986 1.00293 1.21235 0.94838 1.00587 1.06586 1.20992 0.96616 0.94612 0.94342 1.20118 0.98072 0.93958 1.04838 1.24955 0.99141 1.07575 0.85613 1.86498 1.82213 1.41950 1.23962 0.94770 0.79866 0.82133 0.84435 1.20956 0.90558 0.99588 0.92762 1.23628 1.01461 0.94850 0.98514 1.20759 0.94017 0.96896 0.97764 1.21232 1.00079 0.92333 1.08787 0.88065 0.92602 0.92575 0.85115 0.85212 0.89380 0.90231 0.76632 0.92363 0.87650 0.92252 0.84135 0.84916 0.86841 0.77255 1.17830 1.18245 0.84736 0.90546 0.89434 0.85894 0.85489 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.85 10.50 -19.42 -0.20 -1.05 16 3 C 0.12 0.31 6.69 -39.21 -0.26 0.05 16 4 C -0.15 -0.30 9.99 -39.43 -0.39 -0.69 16 5 C -0.07 -0.07 9.70 -39.61 -0.38 -0.45 16 6 C -0.11 -0.06 5.29 -104.60 -0.55 -0.62 16 7 C -0.06 0.04 3.97 -90.95 -0.36 -0.32 16 8 H 0.10 -0.13 8.09 -51.93 -0.42 -0.55 16 9 C -0.14 0.16 7.30 -25.91 -0.19 -0.03 16 10 C 0.12 0.03 4.24 -67.11 -0.28 -0.25 16 11 H 0.12 0.22 7.46 -51.93 -0.39 -0.17 16 12 N -0.72 -0.36 5.30 -54.06 -0.29 -0.64 16 13 C 0.56 2.04 7.76 -12.47 -0.10 1.94 16 14 O -0.52 -3.84 14.76 -16.59 -0.24 -4.09 16 15 C -0.17 -0.37 5.89 -104.85 -0.62 -0.99 16 16 C 0.19 0.43 6.70 -38.70 -0.26 0.17 16 17 O -0.28 -0.97 8.57 -40.53 -0.35 -1.32 16 18 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 19 C -0.21 0.09 9.03 -39.48 -0.36 -0.27 16 20 C -0.05 0.07 8.66 -39.53 -0.34 -0.28 16 21 C -0.17 0.17 5.39 -104.68 -0.56 -0.40 16 22 C -0.06 0.10 2.81 36.00 0.10 0.20 16 23 O -0.54 0.70 12.76 -35.23 -0.45 0.26 16 24 Si 0.69 -1.48 29.77 -169.99 -5.06 -6.54 16 25 C -0.02 0.00 9.09 -39.20 -0.36 -0.35 16 26 C -0.15 0.02 7.25 -25.91 -0.19 -0.17 16 27 C -0.08 -0.04 8.62 -39.61 -0.34 -0.38 16 28 C -0.21 -0.25 9.04 -39.43 -0.36 -0.61 16 29 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 31 H 0.06 -0.10 7.66 -51.93 -0.40 -0.49 16 32 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 33 H 0.13 -0.13 8.05 -52.49 -0.42 -0.55 16 34 H 0.09 -0.15 7.71 -51.93 -0.40 -0.55 16 35 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 36 H 0.40 -0.75 6.76 -40.82 -0.28 -1.02 16 37 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 38 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 40 H 0.14 -0.37 6.30 -52.49 -0.33 -0.70 16 41 H 0.13 -0.47 4.85 -52.48 -0.25 -0.72 16 42 H 0.11 -0.16 7.96 -51.93 -0.41 -0.57 16 43 H 0.38 -1.85 8.70 45.56 0.40 -1.46 16 44 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 45 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 46 H 0.13 -0.27 6.40 -52.49 -0.34 -0.61 16 47 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 48 H 0.09 -0.04 6.30 -51.93 -0.33 -0.37 16 49 H 0.12 -0.14 6.64 -52.49 -0.35 -0.48 16 50 H 0.13 -0.06 6.30 -52.49 -0.33 -0.39 16 LS Contribution 405.71 15.07 6.11 6.11 Total: 0.00 -9.91 405.71 -11.06 -20.96 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -6.75 Total: -12.21 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -3.82 Total: -1.48 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.29 Total: -0.64 kcal Atomic # 8 Polarization: -4.96 SS G_CDS: -1.25 Total: -6.20 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.06 Total: -6.54 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -9.91 -11.06 -20.96 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_12496546.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.570 kcal (2) G-P(sol) polarization free energy of solvation -9.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.477 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.962 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds