Wall clock time and date at job start Sun Mar 7 2021 05:19:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35897 * 117.00239 * 2 1 4 4 C 1.38731 * 120.05953 * 180.02562 * 3 2 1 5 5 C 1.38144 * 119.94478 * 180.02562 * 4 3 2 6 6 C 1.38265 * 120.05509 * 359.97081 * 5 4 3 7 7 C 1.50703 * 119.94269 * 180.02562 * 6 5 4 8 8 H 1.08996 * 112.85169 * 348.80401 * 7 6 5 9 9 C 1.53781 * 113.61417 * 120.00404 * 7 6 5 10 10 C 1.53786 * 87.17350 * 139.93966 * 9 7 6 11 11 H 1.08993 * 113.61491 * 89.15923 * 10 9 7 12 12 N 1.46501 * 113.61366 * 220.06429 * 10 9 7 13 13 C 1.34773 * 120.00122 * 204.99908 * 12 10 9 14 14 O 1.21648 * 119.99686 * 359.97438 * 13 12 10 15 15 C 1.47059 * 120.00339 * 179.97438 * 13 12 10 16 16 C 1.35859 * 125.42621 * 179.69584 * 15 13 12 17 17 C 1.41600 * 107.72889 * 179.84570 * 16 15 13 18 18 C 1.40059 * 133.38051 * 180.13656 * 17 16 15 19 19 C 1.36479 * 119.82802 * 180.32123 * 18 17 16 20 20 C 1.38897 * 120.61193 * 0.02562 * 19 18 17 21 21 C 1.50707 * 119.67368 * 180.02562 * 20 19 18 22 22 O 1.42903 * 109.46878 * 244.97565 * 21 20 19 23 23 Si 1.86299 * 109.46980 * 4.97418 * 21 20 19 24 24 C 1.37708 * 120.65137 * 359.97321 * 20 19 18 25 25 C 1.39185 * 119.80954 * 0.02627 * 24 20 19 26 26 N 1.37491 * 133.18567 * 179.97438 * 25 24 20 27 27 C 1.53782 * 113.61283 * 217.50219 * 7 6 5 28 28 C 1.38264 * 120.11526 * 0.29994 * 6 5 4 29 29 C 1.38150 * 120.05065 * 359.45285 * 28 6 5 30 30 H 1.09005 * 109.46865 * 180.02562 * 1 2 3 31 31 H 1.08994 * 109.46930 * 299.99869 * 1 2 3 32 32 H 1.08997 * 109.46614 * 60.00322 * 1 2 3 33 33 H 1.08003 * 120.02694 * 0.02562 * 4 3 2 34 34 H 1.07997 * 119.97163 * 180.02562 * 5 4 3 35 35 H 1.09002 * 113.61445 * 254.52965 * 9 7 6 36 36 H 1.09002 * 113.61408 * 25.34696 * 9 7 6 37 37 H 0.97002 * 119.99797 * 24.99368 * 12 10 9 38 38 H 1.08001 * 126.13937 * 359.97438 * 16 15 13 39 39 H 1.08001 * 120.09120 * 0.31913 * 18 17 16 40 40 H 1.07999 * 119.69325 * 179.97438 * 19 18 17 41 41 H 1.09001 * 109.47093 * 124.97452 * 21 20 19 42 42 H 0.96697 * 114.00085 * 59.99837 * 22 21 20 43 43 H 1.48496 * 110.00096 * 58.68312 * 23 21 20 44 44 H 1.48499 * 109.99751 * 180.02562 * 23 21 20 45 45 H 1.08000 * 120.09919 * 180.02562 * 24 20 19 46 46 H 0.96995 * 125.60798 * 0.02717 * 26 25 24 47 47 H 1.08997 * 113.61668 * 334.56418 * 27 7 6 48 48 H 1.08998 * 113.61674 * 105.38927 * 27 7 6 49 49 H 1.07998 * 119.97614 * 179.69969 * 28 6 5 50 50 H 1.08000 * 120.02525 * 180.24520 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4314 1.2848 -0.0005 5 6 4.0561 2.5169 0.0000 6 6 3.3019 3.6757 0.0005 7 6 3.9861 5.0185 0.0005 8 1 5.0562 4.9483 0.1951 9 6 3.6375 5.8875 -1.2195 10 6 3.5911 7.0860 -0.2569 11 1 4.5529 7.5832 -0.1320 12 7 2.4979 8.0206 -0.5358 13 6 2.6001 9.3097 -0.1561 14 8 3.5999 9.6970 0.4185 15 6 1.5031 10.2481 -0.4366 16 6 1.4870 11.5641 -0.0995 17 6 0.2600 12.1094 -0.5494 18 6 -0.3032 13.3903 -0.4886 19 6 -1.5405 13.6137 -1.0194 20 6 -2.2493 12.5813 -1.6203 21 6 -3.6138 12.8518 -2.2001 22 8 -4.5966 12.1169 -1.4680 23 14 -3.9874 14.6733 -2.0853 24 6 -1.7170 11.3133 -1.6925 25 6 -0.4568 11.0605 -1.1584 26 7 0.3215 9.9300 -1.0779 27 6 3.2700 6.0747 0.8587 28 6 1.9211 3.6048 0.0066 29 6 1.2915 2.3751 0.0010 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3632 0.5138 -0.8900 33 1 4.0209 0.3799 -0.0014 34 1 5.1345 2.5750 -0.0008 35 1 4.4395 5.9491 -1.9551 36 1 2.6720 5.6475 -1.6649 37 1 1.7006 7.7116 -0.9938 38 1 2.2703 12.0990 0.4168 39 1 0.2402 14.1992 -0.0229 40 1 -1.9729 14.6021 -0.9710 41 1 -3.6324 12.5422 -3.2451 42 1 -4.6363 12.3413 -0.5282 43 1 -2.9545 15.4507 -2.8161 44 1 -5.3306 14.9531 -2.6533 45 1 -2.2757 10.5173 -2.1621 46 1 0.0812 9.0535 -1.4168 47 1 2.2034 5.8870 0.9823 48 1 3.7745 6.2865 1.8014 49 1 1.3342 4.5114 0.0119 50 1 0.2129 2.3202 0.0018 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_13158378.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:19:39 Heat of formation + Delta-G solvation = 12.379175 kcal Electronic energy + Delta-G solvation = -32569.244989 eV Core-core repulsion = 28108.586795 eV Total energy + Delta-G solvation = -4460.658194 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.72207 -41.61370 -40.78701 -39.74572 -38.92022 -37.87070 -36.91526 -34.79648 -33.29296 -32.10483 -31.50046 -30.87429 -30.43476 -28.44876 -27.20646 -26.85626 -25.70087 -24.36007 -23.72711 -23.16628 -22.27512 -21.93578 -21.34806 -20.58446 -19.42250 -19.22089 -18.45387 -18.02063 -17.61407 -17.12061 -16.85252 -16.72008 -16.49017 -16.32090 -16.05189 -16.01458 -15.67626 -15.53896 -15.22554 -15.08058 -14.83299 -14.71596 -14.58819 -14.46265 -14.41127 -14.17967 -14.06298 -13.65146 -13.34565 -13.18327 -13.14730 -12.88211 -12.60139 -12.57142 -12.50121 -12.22940 -12.00575 -11.73435 -11.69506 -11.68232 -11.54672 -11.18749 -10.95055 -10.47765 -10.24626 -10.00516 -9.34648 -9.05337 -8.84983 -5.02260 -0.36210 0.33785 0.38252 0.49696 0.98386 1.27557 1.64995 1.73867 1.91508 1.99077 2.23266 2.29103 2.68637 2.75395 3.30737 3.40718 3.50844 3.58502 3.59255 3.61982 3.68374 3.76466 3.82324 3.88720 3.98338 4.04616 4.10874 4.15462 4.21257 4.26617 4.31349 4.38847 4.41226 4.43897 4.48737 4.52991 4.54462 4.59734 4.61732 4.70401 4.81531 4.87303 4.89719 4.93660 4.98819 5.04190 5.24796 5.28927 5.34937 5.37021 5.40456 5.50654 5.58979 5.64054 5.75258 5.94264 6.16700 6.32454 6.39248 6.53915 6.97278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.125 3.875 4 C -0.149 4.149 5 C -0.073 4.073 6 C -0.108 4.108 7 C -0.064 4.064 8 H 0.104 0.896 9 C -0.137 4.137 10 C 0.122 3.878 11 H 0.122 0.878 12 N -0.719 5.719 13 C 0.586 3.414 14 O -0.516 6.516 15 C 0.012 3.988 16 C -0.099 4.099 17 C -0.117 4.117 18 C -0.050 4.050 19 C -0.145 4.145 20 C -0.088 4.088 21 C -0.068 4.068 22 O -0.541 6.541 23 Si 0.690 3.310 24 C -0.104 4.104 25 C 0.115 3.885 26 N -0.579 5.579 27 C -0.145 4.145 28 C -0.077 4.077 29 C -0.206 4.206 30 H 0.102 0.898 31 H 0.056 0.944 32 H 0.055 0.945 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.081 0.919 36 H 0.087 0.913 37 H 0.396 0.604 38 H 0.159 0.841 39 H 0.133 0.867 40 H 0.130 0.870 41 H 0.113 0.887 42 H 0.380 0.620 43 H -0.257 1.257 44 H -0.256 1.256 45 H 0.126 0.874 46 H 0.417 0.583 47 H 0.088 0.912 48 H 0.079 0.921 49 H 0.122 0.878 50 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.491 -0.983 0.420 2.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.231 6.231 3 C 0.079 3.921 4 C -0.167 4.167 5 C -0.092 4.092 6 C -0.108 4.108 7 C -0.082 4.082 8 H 0.122 0.878 9 C -0.175 4.175 10 C 0.018 3.982 11 H 0.140 0.860 12 N -0.369 5.369 13 C 0.372 3.628 14 O -0.391 6.391 15 C -0.096 4.096 16 C -0.126 4.126 17 C -0.121 4.121 18 C -0.069 4.069 19 C -0.163 4.163 20 C -0.090 4.090 21 C -0.179 4.179 22 O -0.346 6.346 23 Si 0.592 3.408 24 C -0.125 4.125 25 C 0.005 3.995 26 N -0.184 5.184 27 C -0.184 4.184 28 C -0.095 4.095 29 C -0.225 4.225 30 H 0.120 0.880 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.099 0.901 36 H 0.106 0.894 37 H 0.230 0.770 38 H 0.176 0.824 39 H 0.150 0.850 40 H 0.147 0.853 41 H 0.130 0.870 42 H 0.227 0.773 43 H -0.181 1.181 44 H -0.181 1.181 45 H 0.144 0.856 46 H 0.254 0.746 47 H 0.106 0.894 48 H 0.097 0.903 49 H 0.140 0.860 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.924 -0.586 -0.218 2.023 hybrid contribution -0.594 -1.142 -0.775 1.503 sum -2.518 -1.729 -0.993 3.212 Atomic orbital electron populations 1.23087 0.78106 1.04257 1.01370 1.86089 1.21603 1.26889 1.88555 1.19089 0.92452 0.84251 0.96267 1.20478 0.91437 0.98838 1.05987 1.20892 0.99945 0.90899 0.97416 1.19507 0.93299 0.94296 1.03729 1.21233 1.00032 0.90261 0.96724 0.87751 1.23476 1.03059 0.94048 0.96909 1.22664 0.91730 0.87550 0.96273 0.86020 1.45882 1.21190 1.09118 1.60689 1.17231 0.85513 0.81290 0.78719 1.90881 1.29967 1.77247 1.40997 1.20115 0.88278 0.95773 1.05481 1.20987 0.97544 0.91990 1.02082 1.18229 0.95576 0.93986 1.04330 1.20388 0.94528 0.94819 0.97153 1.20465 0.95787 0.98263 1.01806 1.20033 0.96560 0.93134 0.99274 1.25081 0.85829 1.09208 0.97777 1.86503 1.56413 1.66212 1.25482 0.94595 0.80199 0.74800 0.91179 1.19861 0.92357 0.97419 1.02831 1.18309 0.93640 0.86326 1.01193 1.41888 1.14671 1.10423 1.51381 1.23661 1.01569 0.94654 0.98516 1.20735 0.93978 0.96847 0.97928 1.21234 1.00100 0.92330 1.08796 0.87998 0.92564 0.92591 0.85046 0.85164 0.90077 0.89436 0.77029 0.82355 0.84953 0.85308 0.86952 0.77272 1.18148 1.18095 0.85616 0.74551 0.89395 0.90270 0.86019 0.85463 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.65 10.50 -19.42 -0.20 -0.86 16 3 C 0.12 0.23 6.69 -39.22 -0.26 -0.04 16 4 C -0.15 -0.19 9.99 -39.43 -0.39 -0.58 16 5 C -0.07 0.00 9.70 -39.61 -0.38 -0.39 16 6 C -0.11 0.05 5.29 -104.60 -0.55 -0.51 16 7 C -0.06 0.12 3.98 -90.96 -0.36 -0.24 16 8 H 0.10 -0.25 8.09 -51.93 -0.42 -0.67 16 9 C -0.14 0.35 7.29 -25.92 -0.19 0.16 16 10 C 0.12 -0.17 4.25 -67.02 -0.28 -0.45 16 11 H 0.12 0.01 7.46 -51.93 -0.39 -0.37 16 12 N -0.72 1.05 5.35 -54.11 -0.29 0.76 16 13 C 0.59 0.99 7.80 -12.69 -0.10 0.89 16 14 O -0.52 -2.75 16.44 5.23 0.09 -2.67 16 15 C 0.01 0.01 6.96 -82.29 -0.57 -0.56 16 16 C -0.10 -0.17 10.53 -39.15 -0.41 -0.58 16 17 C -0.12 -0.17 6.16 -106.93 -0.66 -0.82 16 18 C -0.05 0.00 10.06 -39.53 -0.40 -0.40 16 19 C -0.14 0.09 8.59 -39.97 -0.34 -0.25 16 20 C -0.09 0.02 5.36 -104.57 -0.56 -0.54 16 21 C -0.07 0.05 2.79 36.01 0.10 0.15 16 22 O -0.54 0.15 12.83 -35.23 -0.45 -0.30 16 23 Si 0.69 -0.93 29.76 -169.99 -5.06 -5.99 16 24 C -0.10 -0.02 9.69 -39.42 -0.38 -0.41 16 25 C 0.12 0.09 7.25 -83.97 -0.61 -0.52 16 26 N -0.58 0.53 6.07 -7.36 -0.04 0.48 16 27 C -0.15 0.23 7.26 -25.82 -0.19 0.04 16 28 C -0.08 0.04 8.61 -39.60 -0.34 -0.30 16 29 C -0.21 -0.08 9.04 -39.43 -0.36 -0.43 16 30 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 31 H 0.06 -0.13 7.66 -51.93 -0.40 -0.52 16 32 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 33 H 0.13 0.05 8.06 -52.48 -0.42 -0.37 16 34 H 0.13 -0.23 8.05 -52.49 -0.42 -0.65 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.09 -0.27 7.70 -51.93 -0.40 -0.67 16 37 H 0.40 -1.63 7.78 -40.82 -0.32 -1.95 16 38 H 0.16 0.18 8.06 -52.49 -0.42 -0.25 16 39 H 0.13 -0.26 8.06 -52.49 -0.42 -0.68 16 40 H 0.13 -0.35 4.85 -52.49 -0.25 -0.60 16 41 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 42 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 43 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 44 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 45 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 46 H 0.42 -1.65 8.12 -40.82 -0.33 -1.98 16 47 H 0.09 -0.17 6.29 -51.93 -0.33 -0.49 16 48 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 49 H 0.12 -0.29 6.63 -52.49 -0.35 -0.63 16 50 H 0.13 -0.17 6.30 -52.49 -0.33 -0.50 16 LS Contribution 412.20 15.07 6.21 6.21 Total: 0.00 -9.48 412.20 -12.52 -22.00 By element: Atomic # 1 Polarization: -8.29 SS G_CDS: -6.51 Total: -14.80 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -6.26 Total: -4.84 kcal Atomic # 7 Polarization: 1.58 SS G_CDS: -0.33 Total: 1.24 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.57 Total: -3.83 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.06 Total: -5.99 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -9.48 -12.52 -22.00 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_13158378.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.380 kcal (2) G-P(sol) polarization free energy of solvation -9.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.001 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.379 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds