Wall clock time and date at job start Sun Mar 7 2021 05:20:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35900 * 116.99960 * 2 1 4 4 C 1.38735 * 120.06000 * 179.97438 * 3 2 1 5 5 C 1.38141 * 119.94791 * 180.02562 * 4 3 2 6 6 C 1.38262 * 120.05370 * 0.02562 * 5 4 3 7 7 C 1.50702 * 119.94183 * 179.97438 * 6 5 4 8 8 H 1.08994 * 112.91064 * 348.75368 * 7 6 5 9 9 C 1.53787 * 113.61150 * 120.00533 * 7 6 5 10 10 C 1.53779 * 87.07963 * 139.98062 * 9 7 6 11 11 H 1.09006 * 113.61280 * 89.11401 * 10 9 7 12 12 N 1.46508 * 113.61245 * 219.93163 * 10 9 7 13 13 C 1.34773 * 119.99594 * 205.00346 * 12 10 9 14 14 O 1.21545 * 120.00500 * 359.97438 * 13 12 10 15 15 C 1.47842 * 119.99342 * 180.02562 * 13 12 10 16 16 C 1.39520 * 120.56363 * 359.97438 * 15 13 12 17 17 N 1.31693 * 120.56793 * 180.02562 * 16 15 13 18 18 C 1.31927 * 121.88075 * 359.97438 * 17 16 15 19 19 C 1.38353 * 121.07929 * 0.02562 * 18 17 16 20 20 C 1.50700 * 120.34660 * 180.02562 * 19 18 17 21 21 O 1.42897 * 109.47138 * 244.99402 * 20 19 18 22 22 Si 1.86298 * 109.47089 * 4.99749 * 20 19 18 23 23 C 1.38352 * 119.30181 * 359.71387 * 19 18 17 24 24 C 1.53779 * 87.08402 * 334.56577 * 10 9 7 25 25 C 1.38270 * 120.11338 * 0.25497 * 6 5 4 26 26 C 1.38144 * 120.05105 * 359.44870 * 25 6 5 27 27 H 1.09001 * 109.47354 * 60.00229 * 1 2 3 28 28 H 1.09002 * 109.46924 * 179.97438 * 1 2 3 29 29 H 1.08999 * 109.47472 * 300.00120 * 1 2 3 30 30 H 1.08004 * 120.02213 * 359.97438 * 4 3 2 31 31 H 1.08004 * 119.97048 * 179.97438 * 5 4 3 32 32 H 1.08997 * 113.61028 * 254.53022 * 9 7 6 33 33 H 1.08998 * 113.61447 * 25.34557 * 9 7 6 34 34 H 0.96996 * 119.99627 * 25.00004 * 12 10 9 35 35 H 1.07999 * 119.71385 * 0.02880 * 16 15 13 36 36 H 1.08001 * 119.45690 * 179.97438 * 18 17 16 37 37 H 1.09000 * 109.46908 * 124.99539 * 20 19 18 38 38 H 0.96696 * 114.00190 * 179.97438 * 21 20 19 39 39 H 1.48492 * 110.00183 * 299.99731 * 22 20 19 40 40 H 1.48501 * 110.00320 * 61.32062 * 22 20 19 41 41 H 1.08007 * 120.85814 * 180.29735 * 23 19 18 42 42 H 1.09002 * 113.61557 * 270.88569 * 24 10 9 43 43 H 1.09004 * 113.61501 * 139.97990 * 24 10 9 44 44 H 1.08000 * 119.97207 * 179.70289 * 25 6 5 45 45 H 1.08006 * 120.02385 * 180.25520 * 26 25 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4313 1.2850 0.0005 5 6 4.0560 2.5170 0.0011 6 6 3.3018 3.6758 0.0016 7 6 3.9860 5.0186 0.0028 8 1 5.0559 4.9495 0.1989 9 6 3.6382 5.8882 -1.2170 10 6 3.5927 7.0848 -0.2522 11 1 4.5552 7.5805 -0.1258 12 7 2.5021 8.0225 -0.5312 13 6 2.6066 9.3106 -0.1488 14 8 3.6054 9.6943 0.4278 15 6 1.5058 10.2566 -0.4299 16 6 0.3539 9.8286 -1.0906 17 7 -0.6265 10.6714 -1.3415 18 6 -0.5638 11.9396 -0.9836 19 6 0.5442 12.4419 -0.3247 20 6 0.5981 13.8934 0.0770 21 8 1.6438 14.5485 -0.6436 22 14 -1.0311 14.7073 -0.3157 23 6 1.5994 11.5961 -0.0326 24 6 3.2693 6.0744 0.8610 25 6 1.9209 3.6048 0.0069 26 6 1.2915 2.3751 0.0002 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8899 30 1 4.0208 0.3800 0.0014 31 1 5.1345 2.5751 0.0019 32 1 4.4406 5.9501 -1.9520 33 1 2.6730 5.6484 -1.6632 34 1 1.7050 7.7161 -0.9911 35 1 0.2655 8.7974 -1.3989 36 1 -1.3906 12.5967 -1.2096 37 1 0.7926 13.9673 1.1469 38 1 1.7363 15.4882 -0.4350 39 1 -1.3079 14.6133 -1.7716 40 1 -2.1225 14.0556 0.4519 41 1 2.4745 11.9604 0.4851 42 1 2.2026 5.8865 0.9838 43 1 3.7739 6.2867 1.8036 44 1 1.3341 4.5114 0.0122 45 1 0.2128 2.3201 0.0002 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_13287814.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:20:17 Heat of formation + Delta-G solvation = -6.135400 kcal Electronic energy + Delta-G solvation = -27978.622550 eV Core-core repulsion = 23929.151403 eV Total energy + Delta-G solvation = -4049.471146 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.146 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.01400 -41.44184 -40.62714 -39.53900 -37.94149 -37.83966 -34.90562 -33.88718 -33.07816 -32.06169 -31.11930 -28.40690 -27.35347 -26.81155 -26.59526 -24.95252 -23.81684 -23.66180 -22.35307 -21.59584 -20.51918 -19.19827 -18.97156 -18.63270 -18.25534 -18.00534 -17.43508 -16.98394 -16.68941 -16.39156 -16.23839 -15.96059 -15.87535 -15.44384 -15.35424 -14.91507 -14.73580 -14.64930 -14.37428 -14.32451 -14.23790 -14.14057 -13.85173 -13.59873 -13.30038 -13.10477 -12.84262 -12.65333 -12.46491 -12.19446 -12.18248 -11.69705 -11.64869 -11.51031 -11.29169 -11.05650 -10.73822 -10.52191 -10.29717 -10.12226 -9.96902 -9.01764 -5.12776 -0.62244 -0.04931 0.37430 0.41871 1.09338 1.50665 1.68153 1.79720 1.95006 2.32147 2.56458 2.72402 2.94138 3.16045 3.36859 3.46406 3.55846 3.62112 3.63440 3.66043 3.72277 3.80949 3.86548 3.92391 3.99823 4.08456 4.13545 4.16011 4.18311 4.35002 4.36032 4.43320 4.51420 4.58597 4.59843 4.65087 4.74268 4.79024 4.86302 4.88150 4.93537 5.04106 5.08956 5.23952 5.31655 5.38653 5.44155 5.67829 5.78735 6.31121 6.42449 6.46662 6.56968 7.04390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.108 4.108 7 C -0.064 4.064 8 H 0.104 0.896 9 C -0.137 4.137 10 C 0.122 3.878 11 H 0.120 0.880 12 N -0.714 5.714 13 C 0.567 3.433 14 O -0.527 6.527 15 C -0.187 4.187 16 C 0.138 3.862 17 N -0.477 5.477 18 C 0.123 3.877 19 C -0.132 4.132 20 C -0.070 4.070 21 O -0.544 6.544 22 Si 0.686 3.314 23 C 0.015 3.985 24 C -0.146 4.146 25 C -0.077 4.077 26 C -0.206 4.206 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.056 0.944 30 H 0.131 0.869 31 H 0.130 0.870 32 H 0.080 0.920 33 H 0.089 0.911 34 H 0.400 0.600 35 H 0.162 0.838 36 H 0.155 0.845 37 H 0.081 0.919 38 H 0.387 0.613 39 H -0.246 1.246 40 H -0.250 1.250 41 H 0.154 0.846 42 H 0.089 0.911 43 H 0.077 0.923 44 H 0.123 0.877 45 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.560 1.815 0.668 3.208 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.079 3.921 4 C -0.168 4.168 5 C -0.092 4.092 6 C -0.108 4.108 7 C -0.083 4.083 8 H 0.122 0.878 9 C -0.175 4.175 10 C 0.017 3.983 11 H 0.138 0.862 12 N -0.366 5.366 13 C 0.354 3.646 14 O -0.403 6.403 15 C -0.192 4.192 16 C -0.021 4.021 17 N -0.185 5.185 18 C -0.033 4.033 19 C -0.135 4.135 20 C -0.181 4.181 21 O -0.351 6.351 22 Si 0.587 3.413 23 C -0.012 4.012 24 C -0.184 4.184 25 C -0.095 4.095 26 C -0.224 4.224 27 H 0.074 0.926 28 H 0.120 0.880 29 H 0.074 0.926 30 H 0.149 0.851 31 H 0.148 0.852 32 H 0.099 0.901 33 H 0.107 0.893 34 H 0.236 0.764 35 H 0.180 0.820 36 H 0.171 0.829 37 H 0.099 0.901 38 H 0.235 0.765 39 H -0.170 1.170 40 H -0.174 1.174 41 H 0.172 0.828 42 H 0.107 0.893 43 H 0.096 0.904 44 H 0.141 0.859 45 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -3.245 0.882 0.071 3.363 hybrid contribution 0.305 -0.274 0.327 0.524 sum -2.940 0.608 0.397 3.028 Atomic orbital electron populations 1.23084 0.78124 1.04227 1.01388 1.86086 1.21591 1.26904 1.88576 1.19088 0.92450 0.84248 0.96318 1.20471 0.91434 0.98819 1.06046 1.20888 0.99926 0.90910 0.97466 1.19511 0.93313 0.94290 1.03692 1.21236 0.99976 0.90260 0.96798 0.87816 1.23480 1.03155 0.93996 0.96854 1.22628 0.91837 0.87535 0.96274 0.86185 1.45889 1.21400 1.08938 1.60324 1.17995 0.86185 0.81914 0.78548 1.90811 1.30981 1.77568 1.40957 1.21064 0.97188 0.95736 1.05256 1.23023 0.87716 0.99422 0.91904 1.67704 1.28913 1.03267 1.18567 1.22724 0.96277 0.92338 0.91970 1.20408 0.95914 0.95742 1.01389 1.24607 1.03166 0.91662 0.98653 1.86492 1.54220 1.27476 1.66914 0.94878 0.74638 0.90217 0.81615 1.21628 0.97273 0.90572 0.91704 1.23636 1.01609 0.94710 0.98474 1.20754 0.93982 0.96901 0.97825 1.21236 1.00113 0.92326 1.08761 0.92573 0.88029 0.92571 0.85081 0.85194 0.90096 0.89268 0.76408 0.82047 0.82859 0.90095 0.76525 1.17015 1.17441 0.82812 0.89293 0.90392 0.85902 0.85446 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.74 10.50 -19.43 -0.20 -0.94 16 3 C 0.12 0.26 6.69 -39.22 -0.26 0.00 16 4 C -0.15 -0.23 9.99 -39.43 -0.39 -0.62 16 5 C -0.07 -0.03 9.70 -39.61 -0.38 -0.41 16 6 C -0.11 0.01 5.29 -104.60 -0.55 -0.55 16 7 C -0.06 0.10 3.98 -90.95 -0.36 -0.27 16 8 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 9 C -0.14 0.29 7.30 -25.92 -0.19 0.10 16 10 C 0.12 -0.10 4.24 -67.12 -0.28 -0.39 16 11 H 0.12 0.08 7.46 -51.93 -0.39 -0.30 16 12 N -0.71 0.55 5.31 -53.96 -0.29 0.27 16 13 C 0.57 1.32 7.78 -12.33 -0.10 1.22 16 14 O -0.53 -3.11 16.02 5.33 0.09 -3.02 16 15 C -0.19 -0.33 5.89 -104.82 -0.62 -0.95 16 16 C 0.14 0.10 10.71 -17.13 -0.18 -0.08 16 17 N -0.48 -1.30 10.35 -12.91 -0.13 -1.44 16 18 C 0.12 0.29 9.84 -17.47 -0.17 0.11 16 19 C -0.13 -0.23 5.38 -104.54 -0.56 -0.79 16 20 C -0.07 0.06 2.81 36.01 0.10 0.16 16 21 O -0.54 0.25 12.82 -35.23 -0.45 -0.21 16 22 Si 0.69 -1.49 29.88 -169.99 -5.08 -6.56 16 23 C 0.01 0.03 9.38 -38.87 -0.36 -0.33 16 24 C -0.15 0.17 7.25 -25.92 -0.19 -0.02 16 25 C -0.08 0.01 8.62 -39.60 -0.34 -0.33 16 26 C -0.21 -0.14 9.04 -39.43 -0.36 -0.50 16 27 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 28 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 29 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 30 H 0.13 0.08 8.06 -52.48 -0.42 -0.34 16 31 H 0.13 -0.19 8.05 -52.48 -0.42 -0.62 16 32 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.09 -0.24 7.71 -51.93 -0.40 -0.64 16 34 H 0.40 -1.36 6.80 -40.82 -0.28 -1.64 16 35 H 0.16 -0.46 6.42 -52.49 -0.34 -0.80 16 36 H 0.15 0.19 4.87 -52.49 -0.26 -0.06 16 37 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 38 H 0.39 -2.15 8.74 45.56 0.40 -1.75 16 39 H -0.25 -0.20 7.05 56.52 0.40 0.20 16 40 H -0.25 -0.04 7.11 56.52 0.40 0.37 16 41 H 0.15 0.36 7.74 -52.48 -0.41 -0.05 16 42 H 0.09 -0.14 6.29 -51.93 -0.33 -0.46 16 43 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 44 H 0.12 -0.24 6.63 -52.49 -0.35 -0.59 16 45 H 0.13 -0.13 6.30 -52.48 -0.33 -0.46 16 LS Contribution 373.61 15.07 5.63 5.63 Total: 0.00 -9.85 373.61 -10.27 -20.12 By element: Atomic # 1 Polarization: -5.55 SS G_CDS: -5.62 Total: -11.16 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -4.22 Total: -2.69 kcal Atomic # 7 Polarization: -0.75 SS G_CDS: -0.42 Total: -1.17 kcal Atomic # 8 Polarization: -3.60 SS G_CDS: -0.57 Total: -4.17 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.08 Total: -6.56 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -9.85 -10.27 -20.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_13287814.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.984 kcal (2) G-P(sol) polarization free energy of solvation -9.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.120 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.135 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds