Wall clock time and date at job start Sun Mar 7 2021 05:20:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35894 * 117.00134 * 2 1 4 4 C 1.38741 * 120.05459 * 180.02562 * 3 2 1 5 5 C 1.38149 * 119.94150 * 180.02562 * 4 3 2 6 6 C 1.38259 * 120.05570 * 0.02581 * 5 4 3 7 7 C 1.50708 * 119.94211 * 179.97438 * 6 5 4 8 8 H 1.09000 * 112.90331 * 348.74029 * 7 6 5 9 9 C 1.53782 * 113.61525 * 119.99558 * 7 6 5 10 10 C 1.53780 * 87.07813 * 139.97698 * 9 7 6 11 11 H 1.09006 * 113.61127 * 89.20106 * 10 9 7 12 12 N 1.46500 * 113.61736 * 220.01496 * 10 9 7 13 13 C 1.34773 * 120.00431 * 205.00698 * 12 10 9 14 14 O 1.21593 * 119.99894 * 359.97438 * 13 12 10 15 15 C 1.47535 * 120.00040 * 179.72702 * 13 12 10 16 16 C 1.40142 * 120.18822 * 179.97438 * 15 13 12 17 17 O 1.35646 * 120.15161 * 0.02562 * 16 15 13 18 18 C 1.38713 * 119.69416 * 179.74633 * 16 15 13 19 19 C 1.50702 * 119.95685 * 180.27373 * 18 16 15 20 20 O 1.42904 * 109.46840 * 75.25534 * 19 18 16 21 21 Si 1.86295 * 109.47130 * 195.25661 * 19 18 16 22 22 C 1.38051 * 120.08724 * 0.52529 * 18 16 15 23 23 C 1.38550 * 120.38966 * 359.74990 * 22 18 16 24 24 C 1.50702 * 119.85307 * 179.97438 * 23 22 18 25 25 C 1.37790 * 120.30226 * 359.97164 * 23 22 18 26 26 C 1.53774 * 87.08480 * 334.56850 * 10 9 7 27 27 C 1.38266 * 120.11655 * 0.24409 * 6 5 4 28 28 C 1.38150 * 120.05062 * 359.45706 * 27 6 5 29 29 H 1.08992 * 109.47121 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47025 * 300.00442 * 1 2 3 31 31 H 1.09001 * 109.46826 * 59.99805 * 1 2 3 32 32 H 1.07996 * 120.02573 * 359.97438 * 4 3 2 33 33 H 1.08003 * 119.96658 * 179.97438 * 5 4 3 34 34 H 1.09001 * 113.61386 * 25.43092 * 9 7 6 35 35 H 1.08996 * 113.68805 * 254.54004 * 9 7 6 36 36 H 0.97000 * 119.99456 * 25.00260 * 12 10 9 37 37 H 0.96706 * 113.99705 * 90.00303 * 17 16 15 38 38 H 1.08994 * 109.46959 * 315.25758 * 19 18 16 39 39 H 0.96695 * 113.99850 * 60.00274 * 20 19 18 40 40 H 1.48505 * 110.00066 * 179.97438 * 21 19 18 41 41 H 1.48507 * 110.00197 * 301.31644 * 21 19 18 42 42 H 1.08000 * 119.80589 * 179.76594 * 22 18 16 43 43 H 1.09001 * 109.46995 * 269.97467 * 24 23 22 44 44 H 1.08999 * 109.46962 * 29.97390 * 24 23 22 45 45 H 1.08992 * 109.47459 * 149.97427 * 24 23 22 46 46 H 1.07999 * 120.04889 * 180.02562 * 25 23 22 47 47 H 1.09003 * 113.61520 * 139.97942 * 26 10 9 48 48 H 1.09001 * 113.61275 * 270.88238 * 26 10 9 49 49 H 1.07994 * 119.97696 * 179.70582 * 27 6 5 50 50 H 1.08000 * 120.02650 * 180.28879 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4314 1.2847 -0.0005 5 6 4.0562 2.5169 0.0000 6 6 3.3021 3.6757 0.0016 7 6 3.9863 5.0184 0.0028 8 1 5.0564 4.9491 0.1983 9 6 3.6378 5.8885 -1.2164 10 6 3.5930 7.0847 -0.2511 11 1 4.5553 7.5813 -0.1262 12 7 2.5012 8.0215 -0.5277 13 6 2.6052 9.3096 -0.1451 14 8 3.6050 9.6941 0.4301 15 6 1.5081 10.2544 -0.4291 16 6 1.6119 11.5945 -0.0326 17 8 2.7220 12.0297 0.6140 18 6 0.5766 12.4752 -0.3095 19 6 0.6846 13.9190 0.1087 20 8 1.5809 14.6033 -0.7690 21 14 -0.9967 14.7171 0.0253 22 6 -0.5548 12.0296 -0.9632 23 6 -0.6636 10.7042 -1.3517 24 6 -1.9044 10.2307 -2.0640 25 6 0.3575 9.8169 -1.0899 26 6 3.2702 6.0739 0.8619 27 6 1.9212 3.6047 0.0078 28 6 1.2916 2.3751 0.0010 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 4.0209 0.3798 -0.0005 33 1 5.1347 2.5748 0.0000 34 1 2.6717 5.6499 -1.6613 35 1 4.4389 5.9514 -1.9528 36 1 1.7034 7.7147 -0.9864 37 1 3.4169 12.3565 0.0262 38 1 1.0627 13.9742 1.1295 39 1 1.3066 14.5946 -1.6962 40 1 -0.9039 16.1412 0.4360 41 1 -1.5371 14.6202 -1.3546 42 1 -1.3598 12.7184 -1.1731 43 1 -2.6347 9.8865 -1.3318 44 1 -2.3280 11.0527 -2.6411 45 1 -1.6478 9.4105 -2.7344 46 1 0.2686 8.7847 -1.3949 47 1 3.7755 6.2859 1.8042 48 1 2.2037 5.8861 0.9853 49 1 1.3344 4.5113 0.0138 50 1 0.2130 2.3202 0.0011 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_13422088.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:20:34 Heat of formation + Delta-G solvation = -64.476112 kcal Electronic energy + Delta-G solvation = -32680.279753 eV Core-core repulsion = 28219.484863 eV Total energy + Delta-G solvation = -4460.794890 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -41.86182 -41.35992 -40.51229 -39.38247 -38.03412 -37.88672 -37.58157 -34.67976 -33.15160 -32.74761 -32.04908 -31.05070 -28.38749 -27.70897 -26.82456 -26.76518 -26.19943 -24.59716 -23.66619 -22.38030 -21.99868 -21.43019 -20.44025 -19.54796 -19.17785 -18.38406 -18.07331 -17.63283 -17.24508 -16.94878 -16.82264 -16.68478 -16.21643 -16.03549 -15.87013 -15.76556 -15.60488 -15.36069 -14.97611 -14.68273 -14.66220 -14.61932 -14.38763 -14.26825 -14.10908 -13.67990 -13.56268 -13.38463 -13.27814 -13.12648 -13.07845 -12.82375 -12.65879 -12.40311 -12.24106 -12.14868 -11.79603 -11.69993 -11.63991 -11.60468 -11.45773 -10.87057 -10.49738 -10.21138 -9.99326 -9.95675 -9.54899 -9.00525 -5.02887 -0.35417 0.02406 0.38362 0.43141 1.20180 1.48216 1.75694 1.88924 2.11128 2.32672 2.55652 2.73784 3.19328 3.31441 3.40620 3.43764 3.54409 3.60536 3.66212 3.68573 3.82145 3.89462 3.94352 4.02543 4.05719 4.10141 4.15296 4.18278 4.25111 4.36743 4.45308 4.48500 4.51292 4.52340 4.54525 4.62113 4.63709 4.67456 4.72189 4.76701 4.88601 4.91770 4.92737 4.98396 5.07180 5.11838 5.17618 5.27652 5.33832 5.39925 5.51423 5.56142 5.69861 5.79756 6.33446 6.43180 6.47183 6.77314 7.24529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.107 4.107 7 C -0.064 4.064 8 H 0.103 0.897 9 C -0.137 4.137 10 C 0.124 3.876 11 H 0.118 0.882 12 N -0.719 5.719 13 C 0.560 3.440 14 O -0.517 6.517 15 C -0.165 4.165 16 C 0.192 3.808 17 O -0.472 6.472 18 C -0.150 4.150 19 C -0.071 4.071 20 O -0.527 6.527 21 Si 0.692 3.308 22 C -0.082 4.082 23 C -0.097 4.097 24 C -0.117 4.117 25 C -0.067 4.067 26 C -0.146 4.146 27 C -0.076 4.076 28 C -0.206 4.206 29 H 0.101 0.899 30 H 0.056 0.944 31 H 0.055 0.945 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.087 0.913 35 H 0.079 0.921 36 H 0.398 0.602 37 H 0.399 0.601 38 H 0.124 0.876 39 H 0.374 0.626 40 H -0.254 1.254 41 H -0.259 1.259 42 H 0.136 0.864 43 H 0.077 0.923 44 H 0.070 0.930 45 H 0.070 0.930 46 H 0.130 0.870 47 H 0.077 0.923 48 H 0.088 0.912 49 H 0.123 0.877 50 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.988 -2.547 -3.259 7.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.079 3.921 4 C -0.168 4.168 5 C -0.092 4.092 6 C -0.107 4.107 7 C -0.083 4.083 8 H 0.121 0.879 9 C -0.175 4.175 10 C 0.019 3.981 11 H 0.136 0.864 12 N -0.371 5.371 13 C 0.347 3.653 14 O -0.392 6.392 15 C -0.168 4.168 16 C 0.145 3.855 17 O -0.283 6.283 18 C -0.151 4.151 19 C -0.180 4.180 20 O -0.333 6.333 21 Si 0.593 3.407 22 C -0.100 4.100 23 C -0.098 4.098 24 C -0.173 4.173 25 C -0.086 4.086 26 C -0.184 4.184 27 C -0.094 4.094 28 C -0.224 4.224 29 H 0.120 0.880 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.149 0.851 33 H 0.148 0.852 34 H 0.106 0.894 35 H 0.098 0.902 36 H 0.234 0.766 37 H 0.258 0.742 38 H 0.141 0.859 39 H 0.221 0.779 40 H -0.179 1.179 41 H -0.184 1.184 42 H 0.153 0.847 43 H 0.096 0.904 44 H 0.089 0.911 45 H 0.089 0.911 46 H 0.148 0.852 47 H 0.095 0.905 48 H 0.106 0.894 49 H 0.141 0.859 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -5.628 -1.873 -2.137 6.304 hybrid contribution 0.204 -0.006 -1.594 1.607 sum -5.424 -1.879 -3.731 6.846 Atomic orbital electron populations 1.23082 0.78146 1.04210 1.01373 1.86086 1.21575 1.26918 1.88594 1.19085 0.92444 0.84242 0.96379 1.20472 0.91437 0.98807 1.06055 1.20892 0.99929 0.90917 0.97484 1.19524 0.93326 0.94314 1.03562 1.21242 0.99952 0.90249 0.96880 0.87887 1.23469 1.02967 0.94212 0.96819 1.22555 0.91962 0.87575 0.96029 0.86379 1.45904 1.21122 1.09176 1.60864 1.18065 0.86558 0.81898 0.78752 1.90838 1.30832 1.77436 1.40131 1.20412 0.96697 0.94897 1.04834 1.18228 0.88313 0.89349 0.89613 1.84686 1.25668 1.83316 1.34619 1.20626 0.95610 0.96920 1.01932 1.24979 1.06045 0.89584 0.97435 1.86643 1.48872 1.76407 1.21343 0.94824 0.78434 0.82196 0.85198 1.21175 0.96684 0.95909 0.96194 1.19785 0.96792 0.93153 1.00027 1.20834 0.94481 1.02067 0.99951 1.21121 0.91849 0.99475 0.96147 1.23628 1.01512 0.94753 0.98536 1.20751 0.93987 0.96883 0.97827 1.21231 1.00084 0.92320 1.08804 0.88045 0.92572 0.92590 0.85100 0.85212 0.89412 0.90240 0.76638 0.74209 0.85856 0.77902 1.17896 1.18376 0.84651 0.90433 0.91115 0.91119 0.85200 0.90466 0.89366 0.85905 0.85459 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.69 10.50 -19.41 -0.20 -0.89 16 3 C 0.12 0.25 6.69 -39.21 -0.26 -0.02 16 4 C -0.15 -0.22 9.99 -39.43 -0.39 -0.62 16 5 C -0.07 -0.03 9.70 -39.61 -0.38 -0.41 16 6 C -0.11 0.00 5.29 -104.60 -0.55 -0.55 16 7 C -0.06 0.08 3.98 -90.96 -0.36 -0.28 16 8 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 9 C -0.14 0.27 7.30 -25.92 -0.19 0.08 16 10 C 0.12 -0.06 4.24 -67.12 -0.28 -0.35 16 11 H 0.12 0.14 7.46 -51.93 -0.39 -0.25 16 12 N -0.72 0.36 5.30 -54.06 -0.29 0.07 16 13 C 0.56 1.49 7.76 -12.47 -0.10 1.40 16 14 O -0.52 -3.30 14.76 -16.59 -0.24 -3.55 16 15 C -0.16 -0.23 5.89 -104.84 -0.62 -0.84 16 16 C 0.19 0.42 6.69 -38.69 -0.26 0.16 16 17 O -0.47 -1.67 10.90 -40.52 -0.44 -2.11 16 18 C -0.15 -0.06 5.27 -104.51 -0.55 -0.61 16 19 C -0.07 -0.01 2.38 36.01 0.09 0.08 16 20 O -0.53 -0.51 12.88 -35.23 -0.45 -0.96 16 21 Si 0.69 -0.86 30.24 -169.99 -5.14 -6.00 16 22 C -0.08 0.09 8.30 -39.53 -0.33 -0.24 16 23 C -0.10 0.16 5.87 -104.67 -0.61 -0.46 16 24 C -0.12 0.43 10.00 36.01 0.36 0.79 16 25 C -0.07 0.09 9.18 -39.20 -0.36 -0.27 16 26 C -0.15 0.11 7.25 -25.92 -0.19 -0.08 16 27 C -0.08 0.01 8.62 -39.60 -0.34 -0.33 16 28 C -0.21 -0.11 9.04 -39.43 -0.36 -0.46 16 29 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 30 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 31 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 32 H 0.13 0.08 8.06 -52.49 -0.42 -0.34 16 33 H 0.13 -0.18 8.05 -52.48 -0.42 -0.61 16 34 H 0.09 -0.23 7.71 -51.93 -0.40 -0.63 16 35 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.40 -1.25 6.76 -40.82 -0.28 -1.53 16 37 H 0.40 0.42 9.06 45.56 0.41 0.83 16 38 H 0.12 0.10 7.82 -51.93 -0.41 -0.31 16 39 H 0.37 -0.81 8.70 45.56 0.40 -0.41 16 40 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 41 H -0.26 0.07 6.68 56.52 0.38 0.44 16 42 H 0.14 -0.35 4.83 -52.49 -0.25 -0.60 16 43 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 44 H 0.07 -0.28 8.08 -51.93 -0.42 -0.70 16 45 H 0.07 -0.31 8.08 -51.93 -0.42 -0.73 16 46 H 0.13 -0.52 6.40 -52.49 -0.34 -0.86 16 47 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 48 H 0.09 -0.10 6.29 -51.93 -0.33 -0.43 16 49 H 0.12 -0.25 6.63 -52.49 -0.35 -0.59 16 50 H 0.13 -0.16 6.30 -52.49 -0.33 -0.49 16 LS Contribution 407.85 15.07 6.15 6.15 Total: 0.00 -9.42 407.85 -11.40 -20.82 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -6.07 Total: -11.47 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -4.70 Total: -2.06 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.29 Total: 0.07 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -1.34 Total: -7.51 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.14 Total: -6.00 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -9.42 -11.40 -20.82 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_13422088.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.659 kcal (2) G-P(sol) polarization free energy of solvation -9.419 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.078 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.476 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds