Wall clock time and date at job start Sun Mar 7 2021 05:20:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35901 * 116.99532 * 2 1 4 4 C 1.38737 * 120.05170 * 180.02562 * 3 2 1 5 5 C 1.38142 * 119.94357 * 180.02562 * 4 3 2 6 6 C 1.38265 * 120.05677 * 0.02562 * 5 4 3 7 7 C 1.50700 * 119.94607 * 179.70519 * 6 5 4 8 8 H 1.08993 * 112.84930 * 350.32406 * 7 6 5 9 9 C 1.53777 * 113.61743 * 121.53052 * 7 6 5 10 10 C 1.53782 * 87.08413 * 139.97865 * 9 7 6 11 11 H 1.09000 * 113.61201 * 89.11123 * 10 9 7 12 12 N 1.46493 * 113.61533 * 220.01737 * 10 9 7 13 13 C 1.34773 * 120.00213 * 204.99829 * 12 10 9 14 14 O 1.21658 * 120.00127 * 0.02562 * 13 12 10 15 15 C 1.47049 * 120.00565 * 179.97438 * 13 12 10 16 16 C 1.36222 * 123.49736 * 180.02562 * 15 13 12 17 17 Cl 1.73599 * 124.60371 * 0.02562 * 16 15 13 18 18 S 1.70444 * 110.79072 * 179.97438 * 16 15 13 19 19 C 1.75492 * 92.46692 * 0.02562 * 18 16 15 20 20 C 1.50701 * 124.69015 * 180.02562 * 19 18 16 21 21 O 1.42897 * 109.47649 * 119.97050 * 20 19 18 22 22 Si 1.86307 * 109.46582 * 359.97078 * 20 19 18 23 23 C 1.32695 * 110.62999 * 359.71185 * 19 18 16 24 24 C 1.53785 * 113.61324 * 219.13597 * 7 6 5 25 25 C 1.38268 * 120.11063 * 359.97438 * 6 5 4 26 26 C 1.38149 * 120.05738 * 0.02562 * 25 6 5 27 27 H 1.09003 * 109.47369 * 299.99418 * 1 2 3 28 28 H 1.08993 * 109.47840 * 59.99890 * 1 2 3 29 29 H 1.09006 * 109.47060 * 179.97438 * 1 2 3 30 30 H 1.08001 * 120.03029 * 0.02562 * 4 3 2 31 31 H 1.07997 * 119.97354 * 179.97438 * 5 4 3 32 32 H 1.09003 * 113.61110 * 254.52781 * 9 7 6 33 33 H 1.08999 * 113.61500 * 25.43014 * 9 7 6 34 34 H 0.97003 * 120.00497 * 24.99610 * 12 10 9 35 35 H 1.08998 * 109.47053 * 239.97831 * 20 19 18 36 36 H 0.96701 * 113.99714 * 300.00324 * 21 20 19 37 37 H 1.48504 * 109.99875 * 180.02562 * 22 20 19 38 38 H 1.48497 * 110.00251 * 301.32154 * 22 20 19 39 39 H 1.07995 * 123.45460 * 180.25325 * 23 19 18 40 40 H 1.09008 * 113.61381 * 334.56440 * 24 7 6 41 41 H 1.08997 * 113.61323 * 105.46368 * 24 7 6 42 42 H 1.08005 * 119.97210 * 179.97438 * 25 6 5 43 43 H 1.07998 * 120.03203 * 179.97438 * 26 25 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2109 0.0000 4 6 3.4312 1.2849 -0.0005 5 6 4.0560 2.5170 0.0000 6 6 3.3018 3.6758 0.0016 7 6 3.9859 5.0186 0.0089 8 1 5.0596 4.9456 0.1812 9 6 3.6132 5.9064 -1.1901 10 6 3.5876 7.0884 -0.2066 11 1 4.5526 7.5823 -0.0925 12 7 2.4906 8.0288 -0.4477 13 6 2.6021 9.3111 -0.0483 14 8 3.6141 9.6879 0.5121 15 6 1.5012 10.2553 -0.2908 16 6 1.5382 11.5650 0.0817 17 17 2.8739 12.3222 0.8919 18 16 0.0956 12.3598 -0.3569 19 6 -0.5830 10.9021 -1.0599 20 6 -1.9436 10.8124 -1.7018 21 8 -1.8013 10.4114 -3.0659 22 14 -2.7760 12.4776 -1.6276 23 6 0.2700 9.8912 -0.9542 24 6 3.2886 6.0604 0.8997 25 6 1.9209 3.6048 0.0021 26 6 1.2913 2.3751 0.0016 27 1 -0.3634 0.5137 0.8900 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 4.0208 0.3800 -0.0014 31 1 5.1344 2.5751 0.0000 32 1 4.4005 5.9797 -1.9405 33 1 2.6385 5.6742 -1.6191 34 1 1.6838 7.7286 -0.8949 35 1 -2.5492 10.0795 -1.1688 36 1 -1.2727 11.0188 -3.6013 37 1 -4.1190 12.4025 -2.2568 38 1 -2.9012 12.9204 -0.2157 39 1 0.0639 8.8973 -1.3230 40 1 2.2248 5.8703 1.0431 41 1 3.8140 6.2577 1.8340 42 1 1.3340 4.5115 0.0038 43 1 0.2128 2.3201 0.0025 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100430_13431040.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:20:49 Heat of formation + Delta-G solvation = -15.399325 kcal Electronic energy + Delta-G solvation = -28770.166874 eV Core-core repulsion = 24515.072379 eV Total energy + Delta-G solvation = -4255.094496 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.068 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.63578 -40.97564 -39.92724 -38.83130 -38.02690 -37.74815 -36.92086 -34.57869 -32.03882 -31.68747 -31.11139 -28.33302 -27.03257 -26.66740 -26.54164 -24.77510 -23.64539 -22.39258 -22.00760 -20.95772 -20.22571 -19.35337 -19.17001 -18.12204 -17.77008 -17.43129 -17.00358 -16.66588 -16.49524 -16.20954 -16.13447 -15.82247 -15.71196 -15.62832 -15.00604 -14.66837 -14.63072 -14.52977 -14.38550 -14.24188 -14.08880 -14.00143 -13.43616 -13.21157 -13.01325 -12.91523 -12.75902 -12.58495 -12.40078 -12.35960 -12.14686 -12.07611 -11.86263 -11.60597 -11.54797 -11.41756 -10.90033 -10.58820 -10.13049 -9.95896 -9.87863 -9.63862 -9.01612 -5.12450 -0.62663 -0.19131 0.38567 0.41652 0.48516 0.72799 1.04973 1.19763 1.57548 1.90427 2.17008 2.19218 2.38211 2.73555 3.28739 3.49659 3.60214 3.71655 3.74347 3.83366 3.88063 3.90830 3.96328 4.01719 4.18593 4.26598 4.34847 4.38014 4.41969 4.46351 4.49983 4.64924 4.71274 4.74269 4.77063 4.77878 4.85472 4.96587 4.99665 5.05951 5.11020 5.18175 5.34207 5.40392 5.56124 5.72655 5.83440 6.43957 6.47754 6.70729 7.15566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.342 6.342 3 C 0.103 3.897 4 C -0.168 4.168 5 C -0.081 4.081 6 C -0.109 4.109 7 C -0.060 4.060 8 H 0.107 0.893 9 C -0.123 4.123 10 C 0.121 3.879 11 H 0.100 0.900 12 N -0.698 5.698 13 C 0.570 3.430 14 O -0.561 6.561 15 C -0.167 4.167 16 C -0.140 4.140 17 Cl 0.002 6.998 18 S 0.262 5.738 19 C -0.228 4.228 20 C -0.018 4.018 21 O -0.542 6.542 22 Si 0.710 3.290 23 C -0.068 4.068 24 C -0.142 4.142 25 C -0.079 4.079 26 C -0.211 4.211 27 H 0.063 0.937 28 H 0.065 0.935 29 H 0.113 0.887 30 H 0.130 0.870 31 H 0.144 0.856 32 H 0.083 0.917 33 H 0.101 0.899 34 H 0.414 0.586 35 H 0.134 0.866 36 H 0.398 0.602 37 H -0.266 1.266 38 H -0.261 1.261 39 H 0.180 0.820 40 H 0.095 0.905 41 H 0.064 0.936 42 H 0.143 0.857 43 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.086 0.425 -4.141 6.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.256 6.256 3 C 0.058 3.942 4 C -0.187 4.187 5 C -0.099 4.099 6 C -0.110 4.110 7 C -0.079 4.079 8 H 0.125 0.875 9 C -0.161 4.161 10 C 0.016 3.984 11 H 0.118 0.882 12 N -0.350 5.350 13 C 0.356 3.644 14 O -0.441 6.441 15 C -0.187 4.187 16 C -0.286 4.286 17 Cl 0.031 6.969 18 S 0.528 5.472 19 C -0.346 4.346 20 C -0.131 4.131 21 O -0.350 6.350 22 Si 0.613 3.387 23 C -0.096 4.096 24 C -0.181 4.181 25 C -0.096 4.096 26 C -0.230 4.230 27 H 0.081 0.919 28 H 0.083 0.917 29 H 0.132 0.868 30 H 0.148 0.852 31 H 0.162 0.838 32 H 0.102 0.898 33 H 0.119 0.881 34 H 0.252 0.748 35 H 0.151 0.849 36 H 0.249 0.751 37 H -0.191 1.191 38 H -0.187 1.187 39 H 0.197 0.803 40 H 0.113 0.887 41 H 0.083 0.917 42 H 0.161 0.839 43 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -5.741 2.022 -3.024 6.797 hybrid contribution 0.451 -1.983 0.303 2.056 sum -5.290 0.039 -2.721 5.949 Atomic orbital electron populations 1.23290 0.76666 1.05342 1.02152 1.86047 1.23292 1.27404 1.88830 1.19341 0.92877 0.84734 0.97275 1.20656 0.91719 0.99387 1.06914 1.21118 1.00821 0.90747 0.97226 1.19695 0.93576 0.94598 1.03099 1.21218 1.00069 0.89512 0.97112 0.87525 1.23415 1.03767 0.92574 0.96373 1.22551 0.91136 0.87572 0.97138 0.88197 1.45711 1.20707 1.08386 1.60152 1.17734 0.85835 0.82568 0.78228 1.90856 1.31639 1.78342 1.43217 1.20363 0.97899 0.92855 1.07535 1.25802 0.98829 0.98331 1.05684 1.98426 1.42660 1.79600 1.76184 1.83251 1.01874 1.09896 1.52203 1.24951 1.03098 0.96938 1.09569 1.24409 0.93107 1.10973 0.84644 1.86513 1.76137 1.54148 1.18241 0.94294 0.83752 0.78401 0.82296 1.21118 0.89554 1.01402 0.97537 1.23637 1.01929 0.94720 0.97787 1.21013 0.94166 0.97386 0.97081 1.21454 1.00911 0.92144 1.08480 0.91863 0.91680 0.86844 0.85173 0.83844 0.89828 0.88091 0.74827 0.84866 0.75094 1.19138 1.18657 0.80268 0.88661 0.91714 0.83930 0.84000 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -1.84 10.50 -92.44 -0.97 -2.81 16 3 C 0.10 0.50 6.69 22.51 0.15 0.65 16 4 C -0.17 -0.70 9.99 22.37 0.22 -0.47 16 5 C -0.08 -0.09 9.70 22.25 0.22 0.12 16 6 C -0.11 0.05 5.29 -19.85 -0.11 -0.06 16 7 C -0.06 0.19 3.97 -11.01 -0.04 0.15 16 8 H 0.11 -0.41 8.08 -2.39 -0.02 -0.43 16 9 C -0.12 0.61 7.30 31.12 0.23 0.84 16 10 C 0.12 -0.15 4.24 45.58 0.19 0.04 16 11 H 0.10 0.32 7.46 -2.39 -0.02 0.30 16 12 N -0.70 1.12 5.34 -443.39 -2.37 -1.24 16 13 C 0.57 3.07 7.79 86.55 0.67 3.74 16 14 O -0.56 -7.55 14.51 -4.21 -0.06 -7.61 16 15 C -0.17 -0.35 5.98 -19.84 -0.12 -0.47 16 16 C -0.14 -0.50 6.87 67.35 0.46 -0.04 16 17 Cl 0.00 0.02 27.20 -2.72 -0.07 -0.06 16 18 S 0.26 -0.73 20.17 -56.49 -1.14 -1.86 16 19 C -0.23 1.18 5.68 24.52 0.14 1.32 16 20 C -0.02 0.12 2.95 71.24 0.21 0.33 16 21 O -0.54 3.71 12.84 -148.98 -1.91 1.79 16 22 Si 0.71 -4.36 30.91 68.60 2.12 -2.24 16 23 C -0.07 0.30 9.71 22.70 0.22 0.52 16 24 C -0.14 0.27 7.27 31.18 0.23 0.50 16 25 C -0.08 0.08 8.54 22.26 0.19 0.27 16 26 C -0.21 -0.22 9.04 22.37 0.20 -0.02 16 27 H 0.06 -0.27 7.66 -2.39 -0.02 -0.28 16 28 H 0.06 -0.30 7.66 -2.39 -0.02 -0.32 16 29 H 0.11 -0.63 8.14 -2.38 -0.02 -0.65 16 30 H 0.13 0.39 8.06 -2.91 -0.02 0.37 16 31 H 0.14 -0.38 8.05 -2.91 -0.02 -0.40 16 32 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 33 H 0.10 -0.72 7.63 -2.39 -0.02 -0.74 16 34 H 0.41 -3.20 7.27 -92.71 -0.67 -3.87 16 35 H 0.13 -1.03 7.96 -2.39 -0.02 -1.05 16 36 H 0.40 -5.57 8.70 -74.06 -0.64 -6.22 16 37 H -0.27 -0.09 7.11 99.48 0.71 0.62 16 38 H -0.26 0.40 7.11 99.48 0.71 1.11 16 39 H 0.18 -1.72 7.10 -2.91 -0.02 -1.74 16 40 H 0.10 -0.33 6.38 -2.38 -0.02 -0.34 16 41 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 42 H 0.14 -0.81 6.72 -2.91 -0.02 -0.83 16 43 H 0.14 -0.41 6.30 -2.91 -0.02 -0.43 16 Total: 0.00 -20.42 385.94 -0.42 -20.84 By element: Atomic # 1 Polarization: -15.10 SS G_CDS: -0.19 Total: -15.30 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: 4.18 Total: 8.49 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -2.37 Total: -1.24 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -2.94 Total: -8.63 kcal Atomic # 14 Polarization: -4.36 SS G_CDS: 2.12 Total: -2.24 kcal Atomic # 16 Polarization: -0.73 SS G_CDS: -1.14 Total: -1.86 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.06 kcal Total: -20.42 -0.42 -20.84 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_13431040.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.441 kcal (2) G-P(sol) polarization free energy of solvation -20.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.418 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.399 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds