Wall clock time and date at job start Sun Mar 7 2021 05:20:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35900 * 116.99951 * 2 1 4 4 C 1.38726 * 120.05580 * 179.97438 * 3 2 1 5 5 C 1.38147 * 119.94381 * 179.97438 * 4 3 2 6 6 C 1.38266 * 120.05500 * 0.02562 * 5 4 3 7 7 C 1.50699 * 119.94145 * 179.97438 * 6 5 4 8 8 H 1.08999 * 112.85071 * 348.79823 * 7 6 5 9 9 C 1.53786 * 113.61502 * 119.99867 * 7 6 5 10 10 C 1.53780 * 87.08369 * 139.97953 * 9 7 6 11 11 H 1.08993 * 113.61878 * 89.19680 * 10 9 7 12 12 N 1.46499 * 113.61280 * 220.01909 * 10 9 7 13 13 C 1.34776 * 119.99853 * 204.99501 * 12 10 9 14 14 O 1.21610 * 119.99842 * 0.02562 * 13 12 10 15 15 C 1.47379 * 119.99829 * 179.97438 * 13 12 10 16 16 C 1.36418 * 127.19564 * 359.97050 * 15 13 12 17 17 O 1.33650 * 108.39792 * 179.76564 * 16 15 13 18 18 C 1.34212 * 110.90853 * 0.44376 * 17 16 15 19 19 C 1.50703 * 125.43768 * 179.81595 * 18 17 16 20 20 O 1.42896 * 109.47055 * 119.69197 * 19 18 17 21 21 Si 1.86304 * 109.46911 * 359.69090 * 19 18 17 22 22 C 1.34180 * 109.12341 * 359.54586 * 18 17 16 23 23 C 1.53782 * 113.61126 * 217.49050 * 7 6 5 24 24 C 1.38263 * 120.11325 * 0.26402 * 6 5 4 25 25 C 1.38148 * 120.05380 * 359.46338 * 24 6 5 26 26 H 1.08999 * 109.47594 * 59.99621 * 1 2 3 27 27 H 1.09000 * 109.47017 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.47627 * 299.99592 * 1 2 3 29 29 H 1.07997 * 120.03126 * 0.02562 * 4 3 2 30 30 H 1.07995 * 119.97361 * 180.02562 * 5 4 3 31 31 H 1.09000 * 113.61322 * 25.42339 * 9 7 6 32 32 H 1.09004 * 113.61222 * 254.52357 * 9 7 6 33 33 H 0.97003 * 120.00329 * 25.00159 * 12 10 9 34 34 H 1.08001 * 125.79863 * 0.04512 * 16 15 13 35 35 H 1.09002 * 109.47152 * 239.69005 * 19 18 17 36 36 H 0.96703 * 114.00193 * 180.02562 * 20 19 18 37 37 H 1.48495 * 110.00011 * 60.00027 * 21 19 18 38 38 H 1.48509 * 109.99497 * 181.32041 * 21 19 18 39 39 H 1.07995 * 127.01946 * 180.26438 * 22 18 17 40 40 H 1.09001 * 113.61621 * 105.47223 * 23 7 6 41 41 H 1.09003 * 113.61779 * 334.56899 * 23 7 6 42 42 H 1.07997 * 119.97155 * 179.72916 * 24 6 5 43 43 H 1.07998 * 120.02839 * 180.27561 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4313 1.2848 0.0005 5 6 4.0560 2.5170 0.0000 6 6 3.3018 3.6758 -0.0005 7 6 3.9860 5.0185 -0.0005 8 1 5.0560 4.9484 0.1950 9 6 3.6384 5.8870 -1.2212 10 6 3.5928 7.0846 -0.2575 11 1 4.5549 7.5813 -0.1324 12 7 2.5012 8.0209 -0.5363 13 6 2.6048 9.3095 -0.1552 14 8 3.6046 9.6950 0.4197 15 6 1.5068 10.2516 -0.4363 16 6 0.3288 9.9802 -1.0684 17 8 -0.3926 11.1042 -1.1169 18 6 0.2687 12.1228 -0.5456 19 6 -0.2397 13.5363 -0.4245 20 8 -0.3224 13.8961 0.9559 21 14 -1.9293 13.6571 -1.2001 22 6 1.4524 11.6804 -0.0943 23 6 3.2691 6.0751 0.8566 24 6 1.9210 3.6048 0.0050 25 6 1.2914 2.3751 -0.0002 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 4.0208 0.3800 0.0005 30 1 5.1344 2.5751 0.0000 31 1 2.6728 5.6478 -1.6665 32 1 4.4411 5.9484 -1.9561 33 1 1.7037 7.7135 -0.9952 34 1 0.0282 9.0192 -1.4590 35 1 0.4442 14.2136 -0.9361 36 1 -0.6436 14.7953 1.1095 37 1 -2.8711 12.7385 -0.5115 38 1 -2.4283 15.0533 -1.1155 39 1 2.2102 12.2564 0.4158 40 1 3.7735 6.2884 1.7990 41 1 2.2024 5.8874 0.9793 42 1 1.3342 4.5114 0.0090 43 1 0.2129 2.3202 -0.0004 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_13456056.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:20:53 Heat of formation + Delta-G solvation = -26.699284 kcal Electronic energy + Delta-G solvation = -26658.762560 eV Core-core repulsion = 22638.907175 eV Total energy + Delta-G solvation = -4019.855385 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.135 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -43.68698 -41.57095 -40.70710 -39.49838 -38.11825 -37.80129 -34.72397 -33.76706 -32.07762 -31.96833 -31.03266 -28.39208 -26.85919 -26.76866 -26.01115 -24.45639 -23.62920 -22.23715 -22.11077 -21.10074 -20.25778 -19.18774 -18.96793 -18.76259 -17.74313 -17.30924 -17.13997 -17.04154 -16.68251 -16.22439 -16.15106 -15.87964 -15.82802 -15.56350 -15.30806 -14.67670 -14.54343 -14.37417 -14.13958 -14.10131 -14.03983 -13.68807 -13.56524 -13.27041 -13.08480 -12.83389 -12.80981 -12.41206 -12.16175 -12.10848 -11.66617 -11.61147 -11.46195 -10.96557 -10.85824 -10.69026 -10.06432 -9.95748 -9.75266 -9.00449 -5.03666 0.25038 0.38480 0.43301 0.88881 1.11783 1.38606 1.68235 1.90542 2.09864 2.32897 2.37438 2.73813 3.19614 3.41117 3.46103 3.58271 3.65253 3.67918 3.81367 3.88131 3.90275 3.94408 4.09460 4.14445 4.18147 4.18591 4.36596 4.39250 4.45820 4.52563 4.61900 4.62339 4.65520 4.68464 4.77196 4.80946 4.91897 4.98158 5.07040 5.13857 5.25805 5.33760 5.39992 5.51942 5.69784 5.79918 5.88025 6.24893 6.43322 6.46711 7.23618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.107 4.107 7 C -0.065 4.065 8 H 0.103 0.897 9 C -0.136 4.136 10 C 0.124 3.876 11 H 0.119 0.881 12 N -0.718 5.718 13 C 0.589 3.411 14 O -0.531 6.531 15 C -0.237 4.237 16 C 0.032 3.968 17 O -0.165 6.165 18 C -0.011 4.011 19 C -0.038 4.038 20 O -0.533 6.533 21 Si 0.702 3.298 22 C -0.121 4.121 23 C -0.146 4.146 24 C -0.077 4.077 25 C -0.206 4.206 26 H 0.056 0.944 27 H 0.101 0.899 28 H 0.056 0.944 29 H 0.131 0.869 30 H 0.130 0.870 31 H 0.088 0.912 32 H 0.080 0.920 33 H 0.398 0.602 34 H 0.215 0.785 35 H 0.098 0.902 36 H 0.389 0.611 37 H -0.252 1.252 38 H -0.253 1.253 39 H 0.161 0.839 40 H 0.077 0.923 41 H 0.088 0.912 42 H 0.123 0.877 43 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.638 -0.415 -4.558 5.846 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.078 3.922 4 C -0.168 4.168 5 C -0.092 4.092 6 C -0.107 4.107 7 C -0.083 4.083 8 H 0.121 0.879 9 C -0.174 4.174 10 C 0.019 3.981 11 H 0.137 0.863 12 N -0.369 5.369 13 C 0.377 3.623 14 O -0.407 6.407 15 C -0.242 4.242 16 C -0.038 4.038 17 O -0.061 6.061 18 C -0.059 4.059 19 C -0.147 4.147 20 O -0.342 6.342 21 Si 0.600 3.400 22 C -0.140 4.140 23 C -0.185 4.185 24 C -0.095 4.095 25 C -0.224 4.224 26 H 0.074 0.926 27 H 0.120 0.880 28 H 0.074 0.926 29 H 0.149 0.851 30 H 0.148 0.852 31 H 0.107 0.893 32 H 0.098 0.902 33 H 0.232 0.768 34 H 0.231 0.769 35 H 0.115 0.885 36 H 0.238 0.762 37 H -0.176 1.176 38 H -0.177 1.177 39 H 0.179 0.821 40 H 0.095 0.905 41 H 0.107 0.893 42 H 0.141 0.859 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -3.738 -0.676 -4.056 5.557 hybrid contribution -0.329 0.472 0.859 1.034 sum -4.067 -0.203 -3.197 5.177 Atomic orbital electron populations 1.23082 0.78145 1.04210 1.01375 1.86087 1.21574 1.26917 1.88593 1.19086 0.92449 0.84244 0.96373 1.20469 0.91436 0.98816 1.06049 1.20893 0.99934 0.90916 0.97475 1.19524 0.93322 0.94320 1.03573 1.21243 0.99960 0.90239 0.96903 0.87866 1.23473 1.03031 0.94095 0.96815 1.22573 0.91936 0.87540 0.96063 0.86294 1.45816 1.21181 1.08963 1.60931 1.17294 0.85654 0.81243 0.78096 1.90814 1.31128 1.77594 1.41211 1.21523 0.97137 0.95813 1.09698 1.24434 0.90424 0.89536 0.99429 1.83650 1.43305 1.16515 1.62634 1.21059 0.92453 0.89319 1.03101 1.23814 1.12940 0.89834 0.88120 1.86566 1.88587 1.37064 1.21943 0.94509 0.74237 0.81317 0.89887 1.22488 0.97797 0.92462 1.01302 1.23638 1.01527 0.94770 0.98546 1.20751 0.93989 0.96881 0.97842 1.21234 1.00086 0.92329 1.08800 0.92582 0.88049 0.92578 0.85097 0.85202 0.89340 0.90164 0.76777 0.76909 0.88455 0.76166 1.17593 1.17712 0.82092 0.90475 0.89344 0.85894 0.85465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.70 10.50 -19.42 -0.20 -0.91 16 3 C 0.12 0.25 6.69 -39.22 -0.26 -0.01 16 4 C -0.15 -0.22 9.99 -39.43 -0.39 -0.62 16 5 C -0.07 -0.03 9.70 -39.60 -0.38 -0.41 16 6 C -0.11 0.01 5.29 -104.60 -0.55 -0.54 16 7 C -0.06 0.09 3.98 -90.96 -0.36 -0.27 16 8 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 9 C -0.14 0.30 7.30 -25.92 -0.19 0.11 16 10 C 0.12 -0.08 4.24 -67.12 -0.28 -0.36 16 11 H 0.12 0.13 7.46 -51.93 -0.39 -0.26 16 12 N -0.72 0.57 5.35 -54.11 -0.29 0.28 16 13 C 0.59 1.70 7.81 -12.54 -0.10 1.60 16 14 O -0.53 -3.80 16.58 5.27 0.09 -3.71 16 15 C -0.24 -0.41 6.31 -103.28 -0.65 -1.06 16 16 C 0.03 -0.04 11.61 30.08 0.35 0.31 16 17 O -0.17 -0.07 8.89 7.67 0.07 0.00 16 18 C -0.01 -0.02 6.24 -35.74 -0.22 -0.24 16 19 C -0.04 0.02 2.97 36.01 0.11 0.13 16 20 O -0.53 -0.33 12.84 -35.23 -0.45 -0.78 16 21 Si 0.70 -1.00 32.09 -169.99 -5.45 -6.45 16 22 C -0.12 -0.34 10.88 -37.45 -0.41 -0.75 16 23 C -0.15 0.13 7.25 -25.92 -0.19 -0.06 16 24 C -0.08 0.02 8.62 -39.61 -0.34 -0.32 16 25 C -0.21 -0.11 9.04 -39.43 -0.36 -0.47 16 26 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 28 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 29 H 0.13 0.08 8.06 -52.49 -0.42 -0.34 16 30 H 0.13 -0.19 8.05 -52.49 -0.42 -0.61 16 31 H 0.09 -0.26 7.71 -51.93 -0.40 -0.66 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.40 -1.60 7.70 -40.82 -0.31 -1.92 16 34 H 0.21 -1.32 7.47 -52.49 -0.39 -1.71 16 35 H 0.10 -0.28 7.96 -51.93 -0.41 -0.69 16 36 H 0.39 -1.51 8.74 45.56 0.40 -1.11 16 37 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 38 H -0.25 0.02 7.11 56.52 0.40 0.42 16 39 H 0.16 0.51 8.06 -52.49 -0.42 0.08 16 40 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 41 H 0.09 -0.12 6.29 -51.93 -0.33 -0.44 16 42 H 0.12 -0.26 6.63 -52.49 -0.35 -0.61 16 43 H 0.13 -0.15 6.30 -52.49 -0.33 -0.48 16 LS Contribution 366.44 15.07 5.52 5.52 Total: 0.00 -10.55 366.44 -9.43 -19.98 By element: Atomic # 1 Polarization: -6.44 SS G_CDS: -5.46 Total: -11.90 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -3.25 Total: -2.02 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.29 Total: 0.28 kcal Atomic # 8 Polarization: -4.90 SS G_CDS: -0.50 Total: -5.40 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.45 Total: -6.45 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -10.55 -9.43 -19.98 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_13456056.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.719 kcal (2) G-P(sol) polarization free energy of solvation -10.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.265 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.980 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.699 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds