Wall clock time and date at job start Sun Mar 7 2021 05:21:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35905 * 116.99604 * 2 1 4 4 C 1.38722 * 120.05728 * 359.72917 * 3 2 1 5 5 C 1.38150 * 119.94514 * 179.69912 * 4 3 2 6 6 C 1.38269 * 120.05089 * 0.59411 * 5 4 3 7 7 C 1.50696 * 119.94512 * 179.70320 * 6 5 4 8 8 H 1.08998 * 112.85183 * 170.31126 * 7 6 5 9 9 C 1.53784 * 113.61160 * 301.50862 * 7 6 5 10 10 C 1.53781 * 87.08316 * 139.98259 * 9 7 6 11 11 H 1.09001 * 113.61769 * 89.11482 * 10 9 7 12 12 N 1.46500 * 113.61479 * 219.93567 * 10 9 7 13 13 C 1.34776 * 120.00056 * 204.99960 * 12 10 9 14 14 O 1.21280 * 119.99725 * 359.97438 * 13 12 10 15 15 C 1.50697 * 119.99790 * 179.97438 * 13 12 10 16 16 C 1.53012 * 109.46976 * 179.97438 * 15 13 12 17 17 O 1.42897 * 109.46905 * 179.97438 * 16 15 13 18 18 C 1.35897 * 116.99621 * 180.02562 * 17 16 15 19 19 C 1.38730 * 120.05918 * 359.72655 * 18 17 16 20 20 C 1.38148 * 119.94655 * 179.74229 * 19 18 17 21 21 C 1.38262 * 120.05465 * 0.51506 * 20 19 18 22 22 C 1.50697 * 119.94630 * 179.74411 * 21 20 19 23 23 O 1.42898 * 109.47446 * 245.02025 * 22 21 20 24 24 Si 1.86307 * 109.46982 * 5.01887 * 22 21 20 25 25 C 1.38267 * 120.11156 * 359.76212 * 21 20 19 26 26 C 1.38144 * 120.05341 * 359.97438 * 25 21 20 27 27 C 1.53786 * 113.61677 * 39.11319 * 7 6 5 28 28 C 1.38268 * 120.11164 * 359.67978 * 6 5 4 29 29 C 1.38139 * 120.05525 * 0.02562 * 28 6 5 30 30 H 1.08996 * 109.47352 * 299.99771 * 1 2 3 31 31 H 1.08999 * 109.47144 * 59.99795 * 1 2 3 32 32 H 1.08995 * 109.47253 * 179.97438 * 1 2 3 33 33 H 1.08006 * 120.03385 * 359.97438 * 4 3 2 34 34 H 1.07998 * 119.97718 * 180.27358 * 5 4 3 35 35 H 1.09012 * 113.61347 * 254.52576 * 9 7 6 36 36 H 1.08993 * 113.61764 * 25.34757 * 9 7 6 37 37 H 0.97000 * 119.99996 * 24.99448 * 12 10 9 38 38 H 1.08994 * 109.47275 * 299.99324 * 15 13 12 39 39 H 1.09002 * 109.47194 * 59.99997 * 15 13 12 40 40 H 1.08994 * 109.47010 * 300.00029 * 16 15 13 41 41 H 1.09002 * 109.46718 * 60.00249 * 16 15 13 42 42 H 1.08004 * 120.02456 * 0.02562 * 19 18 17 43 43 H 1.08001 * 119.96898 * 180.23251 * 20 19 18 44 44 H 1.09002 * 109.47562 * 125.01666 * 22 21 20 45 45 H 0.96706 * 113.99808 * 59.99551 * 23 22 21 46 46 H 1.48499 * 109.99872 * 180.02562 * 24 22 21 47 47 H 1.48498 * 109.99981 * 301.32096 * 24 22 21 48 48 H 1.07997 * 119.96947 * 179.97438 * 25 21 20 49 49 H 1.08009 * 120.02513 * 179.97438 * 26 25 21 50 50 H 1.08999 * 113.60811 * 334.56686 * 27 7 6 51 51 H 1.08993 * 113.61283 * 105.47405 * 27 7 6 52 52 H 1.07994 * 119.97151 * 179.97438 * 28 6 5 53 53 H 1.08006 * 120.02930 * 180.02562 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 1.2915 2.3751 -0.0057 5 6 1.9210 3.6048 0.0006 6 6 3.3018 3.6759 0.0002 7 6 3.9860 5.0186 0.0003 8 1 5.0604 4.9462 0.1689 9 6 3.6090 5.9020 -1.2007 10 6 3.5870 7.0876 -0.2215 11 1 4.5523 7.5820 -0.1126 12 7 2.4902 8.0282 -0.4633 13 6 2.6040 9.3119 -0.0688 14 8 3.6142 9.6882 0.4868 15 6 1.4759 10.2795 -0.3181 16 6 1.8580 11.6587 0.2234 17 8 0.7885 12.5763 -0.0135 18 6 0.9681 13.8553 0.4093 19 6 2.1469 14.2183 1.0443 20 6 2.3292 15.5204 1.4683 21 6 1.3336 16.4590 1.2699 22 6 1.5327 17.8773 1.7386 23 8 0.5916 18.1740 2.7722 24 14 3.2634 18.0759 2.3990 25 6 0.1554 16.0985 0.6424 26 6 -0.0294 14.7990 0.2117 27 6 3.2919 6.0636 0.8897 28 6 4.0560 2.5170 0.0001 29 6 3.4313 1.2849 -0.0001 30 1 -0.3634 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 0.2128 2.3202 -0.0105 34 1 1.3341 4.5114 0.0007 35 1 4.3937 5.9726 -1.9542 36 1 2.6335 5.6674 -1.6263 37 1 1.6821 7.7271 -0.9074 38 1 1.2869 10.3491 -1.3893 39 1 0.5767 9.9274 0.1875 40 1 2.0467 11.5888 1.2946 41 1 2.7572 12.0110 -0.2818 42 1 2.9234 13.4845 1.2028 43 1 3.2483 15.8042 1.9593 44 1 1.3821 18.5608 0.9029 45 1 0.6678 17.6033 3.5491 46 1 3.4723 19.4703 2.8651 47 1 3.4919 17.1272 3.5183 48 1 -0.6209 16.8334 0.4890 49 1 -0.9501 14.5178 -0.2780 50 1 2.2287 5.8741 1.0375 51 1 3.8207 6.2644 1.8214 52 1 5.1344 2.5751 -0.0007 53 1 4.0208 0.3800 0.0003 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100430_4549602.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:21:26 Heat of formation + Delta-G solvation = -61.500018 kcal Electronic energy + Delta-G solvation = -32887.259179 eV Core-core repulsion = 28271.055723 eV Total energy + Delta-G solvation = -4616.203456 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -41.63632 -41.30986 -40.82651 -39.78577 -39.14435 -37.83675 -37.29301 -34.66995 -33.29660 -32.06432 -32.01973 -31.50906 -30.99787 -28.30281 -26.83473 -26.66197 -26.00981 -25.00204 -23.78368 -23.42680 -22.36477 -22.06486 -21.48407 -20.34384 -19.48613 -19.17067 -18.45039 -17.83459 -17.66556 -17.46653 -17.12619 -16.96260 -16.66568 -16.42171 -16.23906 -16.06837 -15.93118 -15.82886 -15.62190 -15.27146 -14.75940 -14.64482 -14.56777 -14.42498 -14.37785 -14.29108 -14.17267 -13.93935 -13.50112 -13.43232 -13.23137 -13.00984 -12.86593 -12.83375 -12.75738 -12.34066 -12.27704 -12.10768 -12.06640 -11.78122 -11.63083 -11.58491 -11.54924 -11.42069 -10.95897 -10.59445 -10.06185 -10.03866 -9.95985 -9.22817 -9.01800 -4.93573 0.27776 0.30583 0.38385 0.41549 1.31369 1.53071 1.57731 1.73474 1.93496 2.38093 2.52723 2.64763 2.73393 3.44090 3.50084 3.56899 3.69857 3.72742 3.74165 3.82752 3.86654 3.90502 3.91824 3.96272 4.01248 4.03162 4.20027 4.26095 4.26909 4.34578 4.35151 4.41771 4.44745 4.49942 4.56246 4.64149 4.68010 4.69857 4.71654 4.74472 4.77396 4.79180 4.85432 4.97578 4.98593 5.05955 5.11319 5.17900 5.19258 5.28746 5.34535 5.40356 5.49152 5.56881 5.72025 5.72265 5.83464 6.32095 6.43927 6.48621 6.49990 7.18496 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.342 6.342 3 C 0.102 3.898 4 C -0.211 4.211 5 C -0.078 4.078 6 C -0.110 4.110 7 C -0.063 4.063 8 H 0.105 0.895 9 C -0.124 4.124 10 C 0.119 3.881 11 H 0.098 0.902 12 N -0.705 5.705 13 C 0.520 3.480 14 O -0.584 6.584 15 C -0.133 4.133 16 C 0.072 3.928 17 O -0.321 6.321 18 C 0.124 3.876 19 C -0.210 4.210 20 C -0.082 4.082 21 C -0.158 4.158 22 C -0.074 4.074 23 O -0.548 6.548 24 Si 0.759 3.241 25 C -0.058 4.058 26 C -0.158 4.158 27 C -0.142 4.142 28 C -0.082 4.082 29 C -0.169 4.169 30 H 0.063 0.937 31 H 0.065 0.935 32 H 0.113 0.887 33 H 0.143 0.857 34 H 0.145 0.855 35 H 0.081 0.919 36 H 0.101 0.899 37 H 0.419 0.581 38 H 0.128 0.872 39 H 0.126 0.874 40 H 0.063 0.937 41 H 0.067 0.933 42 H 0.139 0.861 43 H 0.141 0.859 44 H 0.126 0.874 45 H 0.385 0.615 46 H -0.302 1.302 47 H -0.286 1.286 48 H 0.141 0.859 49 H 0.142 0.858 50 H 0.097 0.903 51 H 0.064 0.936 52 H 0.143 0.857 53 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.439 -3.357 -3.904 5.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.257 6.257 3 C 0.057 3.943 4 C -0.230 4.230 5 C -0.096 4.096 6 C -0.110 4.110 7 C -0.081 4.081 8 H 0.123 0.877 9 C -0.162 4.162 10 C 0.014 3.986 11 H 0.116 0.884 12 N -0.356 5.356 13 C 0.307 3.693 14 O -0.465 6.465 15 C -0.173 4.173 16 C -0.003 4.003 17 O -0.235 6.235 18 C 0.078 3.922 19 C -0.229 4.229 20 C -0.099 4.099 21 C -0.159 4.159 22 C -0.183 4.183 23 O -0.356 6.356 24 Si 0.665 3.335 25 C -0.076 4.076 26 C -0.177 4.177 27 C -0.181 4.181 28 C -0.100 4.100 29 C -0.188 4.188 30 H 0.082 0.918 31 H 0.084 0.916 32 H 0.131 0.869 33 H 0.160 0.840 34 H 0.163 0.837 35 H 0.100 0.900 36 H 0.120 0.880 37 H 0.256 0.744 38 H 0.146 0.854 39 H 0.144 0.856 40 H 0.082 0.918 41 H 0.085 0.915 42 H 0.157 0.843 43 H 0.159 0.841 44 H 0.144 0.856 45 H 0.234 0.766 46 H -0.230 1.230 47 H -0.213 1.213 48 H 0.159 0.841 49 H 0.160 0.840 50 H 0.115 0.885 51 H 0.083 0.917 52 H 0.161 0.839 53 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -1.510 -2.748 -3.367 4.601 hybrid contribution -1.054 -0.612 0.966 1.555 sum -2.563 -3.360 -2.401 4.861 Atomic orbital electron populations 1.23292 0.76627 1.05347 1.02187 1.86048 1.23333 1.27448 1.88834 1.19345 0.92871 0.84762 0.97283 1.21465 1.00936 0.92148 1.08441 1.21021 0.94125 0.97409 0.97020 1.19707 0.93608 0.94609 1.03096 1.21236 1.00035 0.89571 0.97306 0.87678 1.23413 1.03733 0.92750 0.96336 1.22511 0.91380 0.87751 0.96936 0.88365 1.45850 1.20624 1.08677 1.60439 1.20667 0.87949 0.83444 0.77204 1.90736 1.33112 1.78593 1.44021 1.21450 0.98311 0.91278 1.06234 1.22464 0.88669 0.87997 1.01193 1.85956 1.43335 1.17312 1.76877 1.19186 0.94468 0.84126 0.94372 1.21410 0.98322 0.98346 1.04815 1.21021 0.98594 0.92337 0.97957 1.20237 0.95802 0.96378 1.03463 1.25090 1.04407 0.94662 0.94177 1.86566 1.57356 1.61727 1.30001 0.94123 0.77996 0.76298 0.85093 1.20995 0.96847 0.95198 0.94587 1.20680 0.99580 0.92173 1.05241 1.23631 1.01998 0.94709 0.97725 1.21116 1.00800 0.90785 0.97277 1.20657 0.91750 0.99397 1.06966 0.91811 0.91645 0.86877 0.83957 0.83750 0.90024 0.88038 0.74358 0.85428 0.85606 0.91837 0.91461 0.84347 0.84141 0.85580 0.76585 1.22980 1.21284 0.84102 0.83969 0.88512 0.91744 0.83915 0.85247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -1.68 10.50 -92.48 -0.97 -2.65 16 3 C 0.10 0.43 6.69 22.50 0.15 0.58 16 4 C -0.21 -0.04 9.04 22.36 0.20 0.16 16 5 C -0.08 0.17 8.53 22.26 0.19 0.36 16 6 C -0.11 0.16 5.29 -19.85 -0.11 0.06 16 7 C -0.06 0.28 3.97 -11.01 -0.04 0.24 16 8 H 0.11 -0.52 8.08 -2.39 -0.02 -0.54 16 9 C -0.12 0.83 7.29 31.12 0.23 1.05 16 10 C 0.12 -0.46 4.24 45.58 0.19 -0.26 16 11 H 0.10 0.07 7.46 -2.39 -0.02 0.06 16 12 N -0.70 4.12 5.36 -439.76 -2.36 1.77 16 13 C 0.52 -0.35 7.83 87.66 0.69 0.33 16 14 O -0.58 -5.04 15.58 -3.03 -0.05 -5.09 16 15 C -0.13 0.72 6.07 29.85 0.18 0.91 16 16 C 0.07 0.00 4.03 71.99 0.29 0.29 16 17 O -0.32 -0.86 10.14 -92.39 -0.94 -1.80 16 18 C 0.12 0.47 6.69 22.51 0.15 0.62 16 19 C -0.21 -0.58 9.04 22.37 0.20 -0.38 16 20 C -0.08 -0.11 8.66 22.25 0.19 0.09 16 21 C -0.16 -0.22 5.35 -19.85 -0.11 -0.33 16 22 C -0.07 -0.02 2.80 71.23 0.20 0.18 16 23 O -0.55 -1.84 12.83 -148.98 -1.91 -3.75 16 24 Si 0.76 -0.40 29.88 68.60 2.05 1.65 16 25 C -0.06 -0.10 9.68 22.25 0.22 0.11 16 26 C -0.16 -0.40 9.99 22.37 0.22 -0.18 16 27 C -0.14 0.56 7.27 31.18 0.23 0.79 16 28 C -0.08 -0.03 9.70 22.25 0.22 0.18 16 29 C -0.17 -0.60 9.99 22.36 0.22 -0.38 16 30 H 0.06 -0.31 7.67 -2.39 -0.02 -0.33 16 31 H 0.06 -0.34 7.65 -2.39 -0.02 -0.36 16 32 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 33 H 0.14 -0.54 6.30 -2.91 -0.02 -0.56 16 34 H 0.14 -1.04 6.72 -2.91 -0.02 -1.06 16 35 H 0.08 -0.52 8.14 -2.38 -0.02 -0.54 16 36 H 0.10 -0.90 7.62 -2.39 -0.02 -0.92 16 37 H 0.42 -5.10 8.73 -92.71 -0.81 -5.91 16 38 H 0.13 -1.17 8.14 -2.39 -0.02 -1.19 16 39 H 0.13 -1.13 8.14 -2.39 -0.02 -1.15 16 40 H 0.06 0.11 7.61 -2.39 -0.02 0.09 16 41 H 0.07 0.08 7.63 -2.39 -0.02 0.06 16 42 H 0.14 0.16 6.30 -2.91 -0.02 0.14 16 43 H 0.14 -0.27 4.83 -2.91 -0.01 -0.28 16 44 H 0.13 -0.21 7.96 -2.39 -0.02 -0.23 16 45 H 0.39 -0.71 8.70 -74.05 -0.64 -1.36 16 46 H -0.30 -2.09 7.11 99.48 0.71 -1.39 16 47 H -0.29 -1.00 7.00 99.48 0.70 -0.31 16 48 H 0.14 -0.06 8.06 -2.91 -0.02 -0.08 16 49 H 0.14 -0.01 8.06 -2.91 -0.02 -0.04 16 50 H 0.10 -0.54 6.39 -2.39 -0.02 -0.56 16 51 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 52 H 0.14 -0.47 8.05 -2.91 -0.02 -0.49 16 53 H 0.13 0.33 8.06 -2.91 -0.02 0.31 16 Total: 0.00 -21.97 432.95 0.18 -21.79 By element: Atomic # 1 Polarization: -16.93 SS G_CDS: -0.47 Total: -17.40 kcal Atomic # 6 Polarization: 0.66 SS G_CDS: 4.83 Total: 5.48 kcal Atomic # 7 Polarization: 4.12 SS G_CDS: -2.36 Total: 1.77 kcal Atomic # 8 Polarization: -9.42 SS G_CDS: -3.87 Total: -13.29 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: 2.05 Total: 1.65 kcal Total: -21.97 0.18 -21.79 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_4549602.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.708 kcal (2) G-P(sol) polarization free energy of solvation -21.972 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.680 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.180 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.792 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.500 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds