Wall clock time and date at job start Sun Mar 7 2021 05:22:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35904 * 117.00062 * 2 1 4 4 C 1.38733 * 120.05788 * 180.02562 * 3 2 1 5 5 C 1.38144 * 119.94467 * 179.97438 * 4 3 2 6 6 C 1.38259 * 120.05483 * 359.97438 * 5 4 3 7 7 C 1.50706 * 119.94153 * 180.02562 * 6 5 4 8 8 H 1.08996 * 112.84772 * 11.19088 * 7 6 5 9 9 C 1.53775 * 113.61422 * 142.50345 * 7 6 5 10 10 C 1.53776 * 87.08380 * 139.97826 * 9 7 6 11 11 H 1.08999 * 113.69151 * 89.12102 * 10 9 7 12 12 N 1.46494 * 113.61757 * 220.01930 * 10 9 7 13 13 C 1.34783 * 120.00175 * 252.49268 * 12 10 9 14 14 O 1.21689 * 119.99676 * 0.02562 * 13 12 10 15 15 C 1.46676 * 120.00240 * 179.97438 * 13 12 10 16 16 C 1.37868 * 126.23274 * 179.69310 * 15 13 12 17 17 C 1.39841 * 107.08453 * 179.84919 * 16 15 13 18 18 C 1.35450 * 107.86340 * 0.41923 * 17 16 15 19 19 C 1.50697 * 125.56281 * 179.70112 * 18 17 16 20 20 O 1.42908 * 109.46962 * 120.04059 * 19 18 17 21 21 Si 1.86297 * 109.47379 * 0.04214 * 19 18 17 22 22 N 1.35538 * 108.87337 * 359.73809 * 18 17 16 23 23 C 1.53781 * 113.61083 * 240.00005 * 7 6 5 24 24 C 1.38268 * 120.11461 * 0.27296 * 6 5 4 25 25 C 1.38149 * 120.05224 * 359.45710 * 24 6 5 26 26 H 1.09005 * 109.47113 * 60.00122 * 1 2 3 27 27 H 1.08999 * 109.47466 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47830 * 300.00563 * 1 2 3 29 29 H 1.08000 * 120.02655 * 359.97438 * 4 3 2 30 30 H 1.08003 * 119.97097 * 180.02562 * 5 4 3 31 31 H 1.09007 * 113.61519 * 254.52563 * 9 7 6 32 32 H 1.08996 * 113.61809 * 25.42921 * 9 7 6 33 33 H 0.97004 * 120.00347 * 72.49414 * 12 10 9 34 34 H 1.07998 * 126.45701 * 359.96968 * 16 15 13 35 35 H 1.08005 * 126.06821 * 180.17428 * 17 16 15 36 36 H 1.08996 * 109.47602 * 240.03772 * 19 18 17 37 37 H 0.96694 * 114.00003 * 300.00390 * 20 19 18 38 38 H 1.48501 * 109.99821 * 58.67929 * 21 19 18 39 39 H 1.48499 * 110.00184 * 179.97438 * 21 19 18 40 40 H 0.97000 * 125.67333 * 179.97438 * 22 18 17 41 41 H 1.09003 * 113.61408 * 334.56504 * 23 7 6 42 42 H 1.08996 * 113.61907 * 105.46876 * 23 7 6 43 43 H 1.07997 * 119.97204 * 179.72595 * 24 6 5 44 44 H 1.07993 * 120.02573 * 180.27049 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4313 1.2849 -0.0005 5 6 4.0560 2.5170 -0.0011 6 6 3.3018 3.6758 -0.0016 7 6 3.9861 5.0186 -0.0028 8 1 5.0561 4.9482 -0.1980 9 6 3.2694 6.0743 -0.8609 10 6 3.5928 7.0848 0.2522 11 1 4.5550 7.5813 0.1270 12 7 2.5012 8.0213 0.5301 13 6 2.6049 9.3097 0.1480 14 8 3.6051 9.6948 -0.4283 15 6 1.5116 10.2473 0.4256 16 6 1.4841 11.5866 0.0995 17 6 0.2589 12.0927 0.5447 18 6 -0.4215 11.0785 1.1304 19 6 -1.7891 11.1857 1.7541 20 8 -2.6887 10.2998 1.0847 21 14 -2.4084 12.9356 1.5962 22 7 0.3288 9.9517 1.0646 23 6 3.6384 5.8881 1.2170 24 6 1.9210 3.6048 0.0041 25 6 1.2914 2.3751 -0.0010 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3635 0.5139 0.8899 29 1 4.0208 0.3800 -0.0005 30 1 5.1345 2.5751 -0.0019 31 1 3.7740 6.2868 -1.8035 32 1 2.2028 5.8866 -0.9837 33 1 1.7037 7.7143 0.9891 34 1 2.2614 12.1400 -0.4063 35 1 -0.0825 13.1124 0.4433 36 1 -1.7300 10.9150 2.8083 37 1 -2.7906 10.4823 0.1406 38 1 -2.4634 13.3276 0.1649 39 1 -3.7567 13.0544 2.2070 40 1 0.0747 9.0819 1.4107 41 1 2.6725 5.6493 1.6624 42 1 4.4408 5.9501 1.9521 43 1 1.3342 4.5114 0.0081 44 1 0.2129 2.3202 -0.0010 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100430_6580494.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:22:59 Heat of formation + Delta-G solvation = -5.383670 kcal Electronic energy + Delta-G solvation = -26817.689313 eV Core-core repulsion = 22896.476905 eV Total energy + Delta-G solvation = -3921.212409 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.54870 -41.55620 -40.66312 -39.47509 -37.97035 -37.79005 -34.74636 -32.23782 -32.07974 -31.56711 -30.98589 -28.43344 -27.18913 -26.82377 -25.53259 -23.87811 -23.28382 -22.17950 -21.48813 -21.27364 -20.62955 -19.67161 -19.20758 -18.22111 -17.82242 -17.09654 -16.75252 -16.70803 -16.55397 -16.20029 -15.93116 -15.85681 -15.43539 -15.22241 -14.91119 -14.74293 -14.59899 -14.35908 -14.32385 -14.11797 -13.97709 -13.68267 -13.62121 -13.29182 -13.12615 -12.86009 -12.48005 -12.38915 -12.20726 -11.94623 -11.70955 -11.65881 -11.51524 -11.18067 -10.88430 -10.18081 -10.09348 -9.99085 -9.28509 -9.03684 -5.00495 0.33802 0.35327 0.40236 1.08142 1.54329 1.57547 1.79893 2.01114 2.12427 2.30163 2.36354 2.70329 3.15118 3.35410 3.50178 3.58441 3.62387 3.74148 3.80241 3.85440 3.90498 4.06964 4.12889 4.16186 4.21224 4.25908 4.33089 4.38354 4.41764 4.49791 4.56231 4.59991 4.63320 4.72666 4.85399 4.92650 4.97843 5.02770 5.06312 5.08881 5.29716 5.36303 5.41385 5.57744 5.66219 5.76660 5.81218 6.15908 6.20169 6.40370 6.40939 7.10958 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.107 4.107 7 C -0.064 4.064 8 H 0.104 0.896 9 C -0.146 4.146 10 C 0.123 3.877 11 H 0.121 0.879 12 N -0.722 5.722 13 C 0.591 3.409 14 O -0.523 6.523 15 C -0.051 4.051 16 C -0.098 4.098 17 C -0.199 4.199 18 C 0.023 3.977 19 C -0.062 4.062 20 O -0.535 6.535 21 Si 0.718 3.282 22 N -0.524 5.524 23 C -0.137 4.137 24 C -0.077 4.077 25 C -0.206 4.206 26 H 0.056 0.944 27 H 0.102 0.898 28 H 0.055 0.945 29 H 0.132 0.868 30 H 0.131 0.869 31 H 0.078 0.922 32 H 0.087 0.913 33 H 0.394 0.606 34 H 0.153 0.847 35 H 0.151 0.849 36 H 0.120 0.880 37 H 0.380 0.620 38 H -0.255 1.255 39 H -0.256 1.256 40 H 0.416 0.584 41 H 0.087 0.913 42 H 0.080 0.920 43 H 0.122 0.878 44 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.570 -0.075 2.595 3.653 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.231 6.231 3 C 0.079 3.921 4 C -0.167 4.167 5 C -0.092 4.092 6 C -0.108 4.108 7 C -0.083 4.083 8 H 0.122 0.878 9 C -0.184 4.184 10 C 0.019 3.981 11 H 0.139 0.861 12 N -0.373 5.373 13 C 0.379 3.621 14 O -0.398 6.398 15 C -0.165 4.165 16 C -0.124 4.124 17 C -0.223 4.223 18 C -0.095 4.095 19 C -0.171 4.171 20 O -0.342 6.342 21 Si 0.617 3.383 22 N -0.120 5.120 23 C -0.175 4.175 24 C -0.095 4.095 25 C -0.225 4.225 26 H 0.074 0.926 27 H 0.120 0.880 28 H 0.074 0.926 29 H 0.150 0.850 30 H 0.148 0.852 31 H 0.096 0.904 32 H 0.105 0.895 33 H 0.228 0.772 34 H 0.171 0.829 35 H 0.169 0.831 36 H 0.138 0.862 37 H 0.228 0.772 38 H -0.179 1.179 39 H -0.181 1.181 40 H 0.253 0.747 41 H 0.105 0.895 42 H 0.099 0.901 43 H 0.140 0.860 44 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.428 0.110 2.488 3.478 hybrid contribution -1.105 -1.389 -0.483 1.839 sum -3.533 -1.279 2.005 4.259 Atomic orbital electron populations 1.23083 0.78133 1.04235 1.01368 1.86088 1.21581 1.26887 1.88574 1.19088 0.92456 0.84241 0.96324 1.20476 0.91425 0.98833 1.05992 1.20893 0.99949 0.90897 0.97439 1.19518 0.93295 0.94328 1.03640 1.21239 1.00005 0.90237 0.96785 0.87770 1.23627 1.01483 0.94754 0.98566 1.22598 0.91872 0.87530 0.96120 0.86103 1.45889 1.21116 1.09290 1.60956 1.17095 0.85524 0.81082 0.78441 1.90871 1.30213 1.77371 1.41394 1.20489 0.89100 0.96433 1.10454 1.21345 0.98101 0.91681 1.01283 1.20720 0.96197 0.99001 1.06383 1.21088 0.95611 0.87090 1.05732 1.24918 0.84917 1.08241 0.99000 1.86592 1.64734 1.55890 1.26934 0.94231 0.83372 0.76545 0.84186 1.41936 1.13998 1.11013 1.45102 1.23478 1.02995 0.94153 0.96886 1.20736 0.93994 0.96840 0.97922 1.21230 1.00090 0.92336 1.08802 0.92578 0.88012 0.92601 0.85045 0.85154 0.90353 0.89462 0.77236 0.82914 0.83109 0.86214 0.77156 1.17884 1.18054 0.74677 0.89486 0.90097 0.86039 0.85483 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.72 10.50 -19.44 -0.20 -0.92 16 3 C 0.12 0.26 6.69 -39.22 -0.26 -0.01 16 4 C -0.15 -0.22 9.99 -39.43 -0.39 -0.62 16 5 C -0.07 -0.03 9.70 -39.61 -0.38 -0.41 16 6 C -0.11 0.01 5.29 -104.60 -0.55 -0.55 16 7 C -0.06 0.09 3.98 -90.96 -0.36 -0.27 16 8 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 9 C -0.15 0.15 7.25 -25.92 -0.19 -0.04 16 10 C 0.12 -0.10 4.24 -67.12 -0.28 -0.38 16 11 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 12 N -0.72 0.60 5.35 -54.33 -0.29 0.31 16 13 C 0.59 1.38 7.79 -12.85 -0.10 1.28 16 14 O -0.52 -3.21 16.48 5.20 0.09 -3.13 16 15 C -0.05 -0.06 7.06 -81.98 -0.58 -0.64 16 16 C -0.10 -0.14 10.65 -39.12 -0.42 -0.56 16 17 C -0.20 0.06 9.32 -39.98 -0.37 -0.32 16 18 C 0.02 -0.02 6.47 -81.95 -0.53 -0.55 16 19 C -0.06 0.12 3.08 36.00 0.11 0.23 16 20 O -0.54 0.40 12.88 -35.23 -0.45 -0.05 16 21 Si 0.72 -1.72 30.54 -169.99 -5.19 -6.91 16 22 N -0.52 0.62 5.99 -5.70 -0.03 0.58 16 23 C -0.14 0.29 7.30 -25.92 -0.19 0.10 16 24 C -0.08 0.01 8.59 -39.60 -0.34 -0.33 16 25 C -0.21 -0.14 9.04 -39.43 -0.36 -0.50 16 26 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 29 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 30 H 0.13 -0.20 8.05 -52.48 -0.42 -0.62 16 31 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.09 -0.11 6.32 -51.93 -0.33 -0.44 16 33 H 0.39 -1.34 7.86 -40.82 -0.32 -1.66 16 34 H 0.15 0.19 8.06 -52.49 -0.42 -0.23 16 35 H 0.15 -0.33 6.17 -52.48 -0.32 -0.66 16 36 H 0.12 -0.35 7.96 -51.93 -0.41 -0.77 16 37 H 0.38 -1.18 8.70 45.56 0.40 -0.79 16 38 H -0.25 0.04 7.11 56.52 0.40 0.44 16 39 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 40 H 0.42 -1.44 8.19 -40.82 -0.33 -1.77 16 41 H 0.09 -0.23 7.69 -51.93 -0.40 -0.63 16 42 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 43 H 0.12 -0.23 6.67 -52.49 -0.35 -0.58 16 44 H 0.13 -0.13 6.30 -52.49 -0.33 -0.46 16 LS Contribution 367.52 15.07 5.54 5.54 Total: 0.00 -8.68 367.52 -10.50 -19.18 By element: Atomic # 1 Polarization: -6.26 SS G_CDS: -5.74 Total: -12.00 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -4.21 Total: -2.60 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.32 Total: 0.89 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -0.57 Total: -4.10 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.19 Total: -6.91 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -8.68 -10.50 -19.18 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100430_6580494.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.801 kcal (2) G-P(sol) polarization free energy of solvation -8.683 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.184 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.384 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds