Wall clock time and date at job start Sun Mar 7 2021 05:45:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.42897 * 109.47409 * 2 1 4 4 C 1.35901 * 117.00045 * 275.32409 * 3 2 1 5 5 C 1.38732 * 120.05566 * 5.08692 * 4 3 2 6 6 C 1.38145 * 119.94384 * 179.74720 * 5 4 3 7 7 C 1.38262 * 120.05447 * 0.50117 * 6 5 4 8 8 C 1.50699 * 119.94547 * 179.74726 * 7 6 5 9 9 O 1.42901 * 109.47217 * 120.02068 * 8 7 6 10 10 Si 1.86304 * 109.46891 * 0.02562 * 8 7 6 11 11 C 1.38263 * 120.11229 * 359.77377 * 7 6 5 12 12 C 1.38142 * 120.05710 * 359.97328 * 11 7 6 13 13 C 1.50701 * 109.47111 * 120.00238 * 2 1 3 14 14 O 1.21280 * 119.99785 * 244.99900 * 13 2 1 15 15 N 1.34774 * 120.00180 * 64.99709 * 13 2 1 16 16 C 1.46501 * 120.00283 * 180.02562 * 15 13 2 17 17 H 1.08999 * 109.46887 * 324.99675 * 16 15 13 18 18 C 1.53006 * 109.47110 * 85.00028 * 16 15 13 19 19 C 1.52994 * 109.46919 * 180.02562 * 18 16 15 20 20 C 1.53005 * 109.47085 * 299.99614 * 19 18 16 21 21 H 1.08999 * 109.46913 * 300.00134 * 20 19 18 22 22 O 1.42901 * 109.47267 * 180.02562 * 20 19 18 23 23 C 1.42897 * 114.00071 * 89.99575 * 22 20 19 24 24 F 1.39897 * 109.47533 * 299.99974 * 23 22 20 25 25 F 1.39905 * 109.46925 * 60.00327 * 23 22 20 26 26 C 1.52997 * 109.47068 * 60.00449 * 20 19 18 27 27 C 1.52995 * 109.47399 * 204.99933 * 16 15 13 28 28 H 1.08998 * 109.47950 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47192 * 300.00120 * 1 2 3 30 30 H 1.08999 * 109.47442 * 59.99353 * 1 2 3 31 31 H 1.09004 * 109.47192 * 239.99880 * 2 1 3 32 32 H 1.08002 * 120.02927 * 359.97438 * 5 4 3 33 33 H 1.08004 * 119.96995 * 180.23289 * 6 5 4 34 34 H 1.08995 * 109.47493 * 240.02272 * 8 7 6 35 35 H 0.96705 * 114.00141 * 180.02562 * 9 8 7 36 36 H 1.48499 * 109.99996 * 59.99951 * 10 8 7 37 37 H 1.48503 * 109.99702 * 181.31626 * 10 8 7 38 38 H 1.08005 * 119.97138 * 180.02562 * 11 7 6 39 39 H 1.08003 * 120.02877 * 179.97438 * 12 11 7 40 40 H 0.97000 * 120.00151 * 359.97438 * 15 13 2 41 41 H 1.09005 * 109.46720 * 299.99957 * 18 16 15 42 42 H 1.08996 * 109.47091 * 59.99819 * 18 16 15 43 43 H 1.08999 * 109.47202 * 179.97438 * 19 18 16 44 44 H 1.08996 * 109.47758 * 59.99772 * 19 18 16 45 45 H 1.09004 * 109.46697 * 179.97438 * 23 22 20 46 46 H 1.08995 * 109.47360 * 180.02562 * 26 20 19 47 47 H 1.08999 * 109.47511 * 60.00051 * 26 20 19 48 48 H 1.09003 * 109.47373 * 299.99784 * 27 16 15 49 49 H 1.08999 * 109.47032 * 59.99555 * 27 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 2.1061 1.9664 -1.2057 5 6 1.6544 1.3303 -2.3529 6 6 1.7521 1.9640 -3.5765 7 6 2.3091 3.2267 -3.6599 8 6 2.4197 3.9133 -4.9968 9 8 1.6857 5.1390 -4.9650 10 14 1.7223 2.8062 -6.3230 11 6 2.7652 3.8604 -2.5188 12 6 2.6650 3.2332 -1.2921 13 6 2.0323 -0.7105 1.2304 14 8 2.6529 -0.0980 2.0734 15 7 1.7918 -2.0264 1.3941 16 6 2.2796 -2.7170 2.5905 17 1 3.2397 -2.2949 2.8875 18 6 1.2713 -2.5410 3.7278 19 6 1.7811 -3.2616 4.9774 20 6 1.9517 -4.7514 4.6731 21 1 0.9917 -5.1737 4.3763 22 8 2.4273 -5.4246 5.8404 23 6 1.3897 -5.9161 6.6913 24 9 0.5971 -4.8480 7.1249 25 9 0.5982 -6.8268 5.9831 26 6 2.9599 -4.9274 3.5359 27 6 2.4498 -4.2066 2.2859 28 1 -0.3635 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 1.8933 -0.5139 -0.8900 32 1 1.2233 0.3422 -2.2889 33 1 1.3971 1.4707 -4.4694 34 1 3.4674 4.1227 -5.2122 35 1 1.7126 5.6352 -5.7946 36 1 0.2940 2.5133 -6.0409 37 1 1.8544 3.4586 -7.6505 38 1 3.1995 4.8470 -2.5865 39 1 3.0218 3.7284 -0.4011 40 1 1.2951 -2.5162 0.7202 41 1 1.1502 -1.4796 3.9449 42 1 0.3113 -2.9630 3.4308 43 1 1.0631 -3.1358 5.7878 44 1 2.7411 -2.8392 5.2743 45 1 1.8326 -6.4140 7.5538 46 1 3.0811 -5.9886 3.3188 47 1 3.9199 -4.5050 3.8328 48 1 1.4897 -4.6288 1.9889 49 1 3.1680 -4.3321 1.4757 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:45:01 Heat of formation + Delta-G solvation = -235.542219 kcal Electronic energy + Delta-G solvation = -33799.811355 eV Core-core repulsion = 28750.057474 eV Total energy + Delta-G solvation = -5049.753881 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.163 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -50.10353 -48.20401 -41.81073 -40.94407 -39.95278 -38.96546 -37.72327 -37.26927 -35.02065 -33.35585 -32.03544 -31.88887 -31.65745 -29.90347 -26.78646 -26.46439 -25.40591 -24.20636 -23.99973 -23.21074 -22.16698 -21.54763 -21.09055 -19.49066 -19.44854 -18.93736 -18.68160 -18.57923 -18.40714 -17.41710 -17.01415 -16.79159 -16.71447 -16.32054 -15.83947 -15.76567 -15.73343 -15.52538 -15.24721 -15.04806 -14.89814 -14.61955 -14.54309 -14.44703 -14.32826 -14.24944 -13.98498 -13.78505 -13.77021 -13.55533 -13.49041 -13.39222 -13.38173 -12.93368 -12.88252 -12.49851 -12.45477 -12.32916 -12.11728 -12.05758 -11.90013 -11.67552 -11.61584 -11.14430 -10.78409 -10.49755 -10.19020 -9.98784 -9.14870 -4.99919 0.32685 0.34763 1.26738 1.44841 1.48712 1.56711 1.88635 1.93209 2.45659 2.63657 2.65577 3.33187 3.34822 3.39139 3.43979 3.54956 3.57057 3.70846 3.72687 3.79422 3.82334 3.87753 3.91256 3.92988 3.99559 4.02610 4.21598 4.23651 4.27382 4.30088 4.37774 4.42737 4.46354 4.54358 4.56461 4.69012 4.74913 4.83414 4.90177 4.94151 4.99235 5.02179 5.07676 5.13563 5.21406 5.29329 5.34677 5.53350 5.55724 5.71991 6.23739 6.39152 6.44110 7.08271 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.208 4.208 6 C -0.073 4.073 7 C -0.111 4.111 8 C -0.071 4.071 9 O -0.537 6.537 10 Si 0.679 3.321 11 C -0.050 4.050 12 C -0.146 4.146 13 C 0.520 3.480 14 O -0.509 6.509 15 N -0.724 5.724 16 C 0.144 3.856 17 H 0.094 0.906 18 C -0.127 4.127 19 C -0.142 4.142 20 C 0.077 3.923 21 H 0.075 0.925 22 O -0.378 6.378 23 C 0.404 3.596 24 F -0.207 7.207 25 F -0.209 7.209 26 C -0.110 4.110 27 C -0.123 4.123 28 H 0.079 0.921 29 H 0.076 0.924 30 H 0.079 0.921 31 H 0.101 0.899 32 H 0.134 0.866 33 H 0.130 0.870 34 H 0.076 0.924 35 H 0.379 0.621 36 H -0.256 1.256 37 H -0.261 1.261 38 H 0.133 0.867 39 H 0.136 0.864 40 H 0.401 0.599 41 H 0.076 0.924 42 H 0.067 0.933 43 H 0.079 0.921 44 H 0.078 0.922 45 H 0.168 0.832 46 H 0.080 0.920 47 H 0.080 0.920 48 H 0.073 0.927 49 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.367 -5.446 -3.661 6.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.089 3.911 5 C -0.226 4.226 6 C -0.091 4.091 7 C -0.111 4.111 8 C -0.181 4.181 9 O -0.344 6.344 10 Si 0.580 3.420 11 C -0.068 4.068 12 C -0.165 4.165 13 C 0.304 3.696 14 O -0.383 6.383 15 N -0.377 5.377 16 C 0.040 3.960 17 H 0.113 0.887 18 C -0.166 4.166 19 C -0.180 4.180 20 C 0.021 3.979 21 H 0.093 0.907 22 O -0.300 6.300 23 C 0.312 3.688 24 F -0.189 7.189 25 F -0.191 7.191 26 C -0.148 4.148 27 C -0.161 4.161 28 H 0.098 0.902 29 H 0.095 0.905 30 H 0.098 0.902 31 H 0.119 0.881 32 H 0.152 0.848 33 H 0.147 0.853 34 H 0.094 0.906 35 H 0.227 0.773 36 H -0.180 1.180 37 H -0.187 1.187 38 H 0.151 0.849 39 H 0.154 0.846 40 H 0.236 0.764 41 H 0.095 0.905 42 H 0.086 0.914 43 H 0.098 0.902 44 H 0.097 0.903 45 H 0.185 0.815 46 H 0.099 0.901 47 H 0.099 0.901 48 H 0.092 0.908 49 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 0.314 -5.211 -2.839 5.942 hybrid contribution -0.943 0.878 -0.710 1.472 sum -0.630 -4.332 -3.549 5.635 Atomic orbital electron populations 1.22358 0.92325 1.03915 1.04942 1.22194 0.95916 0.83310 0.97990 1.86230 1.80873 1.25394 1.27069 1.19068 0.95194 0.92852 0.83945 1.21168 1.07385 1.01798 0.92263 1.20707 0.97056 0.94265 0.97024 1.19159 1.02819 0.94918 0.94232 1.24731 0.99404 0.91678 1.02263 1.86596 1.74521 1.33710 1.39551 0.95205 0.83693 0.87014 0.76078 1.20829 0.96324 0.99044 0.90569 1.20517 1.03379 0.93606 0.98949 1.20086 0.79870 0.82206 0.87415 1.90781 1.38610 1.65470 1.43398 1.45910 1.58631 1.08970 1.24193 1.21093 0.98734 0.91869 0.84323 0.88749 1.21882 0.98712 1.01816 0.94162 1.22125 1.03403 0.93973 0.98513 1.22408 0.98503 0.92405 0.84626 0.90675 1.88445 1.31913 1.73869 1.35779 1.23209 0.78230 0.77518 0.89812 1.93066 1.76871 1.58996 1.89936 1.93068 1.76972 1.67694 1.81320 1.21517 0.99005 1.01868 0.92456 1.21781 1.02729 0.93448 0.98172 0.90190 0.90465 0.90242 0.88126 0.84849 0.85273 0.90624 0.77298 1.18020 1.18671 0.84924 0.84646 0.76412 0.90503 0.91408 0.90204 0.90331 0.81535 0.90116 0.90133 0.90812 0.90004 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.39 9.12 37.15 0.34 0.73 16 2 C 0.07 -0.02 2.64 -27.89 -0.07 -0.10 16 3 O -0.28 -0.89 9.34 -39.29 -0.37 -1.26 16 4 C 0.13 0.31 6.60 -39.22 -0.26 0.05 16 5 C -0.21 -0.05 8.23 -39.43 -0.32 -0.38 16 6 C -0.07 -0.03 8.66 -39.61 -0.34 -0.37 16 7 C -0.11 -0.15 5.42 -104.60 -0.57 -0.72 16 8 C -0.07 0.00 2.81 36.01 0.10 0.10 16 9 O -0.54 -0.71 12.74 -35.23 -0.45 -1.16 16 10 Si 0.68 -0.68 29.78 -169.99 -5.06 -5.75 16 11 C -0.05 -0.09 9.60 -39.61 -0.38 -0.47 16 12 C -0.15 -0.35 9.99 -39.43 -0.39 -0.75 16 13 C 0.52 0.70 7.14 -10.99 -0.08 0.62 16 14 O -0.51 -3.15 16.17 -14.30 -0.23 -3.39 16 15 N -0.72 1.47 5.04 -53.81 -0.27 1.20 16 16 C 0.14 -0.19 2.45 -67.93 -0.17 -0.36 16 17 H 0.09 0.08 7.58 -51.93 -0.39 -0.32 16 18 C -0.13 0.08 5.49 -26.73 -0.15 -0.06 16 19 C -0.14 0.03 5.39 -26.73 -0.14 -0.11 16 20 C 0.08 -0.05 2.40 -26.73 -0.06 -0.12 16 21 H 0.08 -0.05 7.20 -51.93 -0.37 -0.43 16 22 O -0.38 -0.07 10.29 -35.23 -0.36 -0.43 16 23 C 0.40 -0.40 6.26 101.05 0.63 0.23 16 24 F -0.21 -0.17 15.46 2.25 0.03 -0.13 16 25 F -0.21 -0.13 16.63 2.25 0.04 -0.09 16 26 C -0.11 0.22 5.58 -26.71 -0.15 0.08 16 27 C -0.12 0.40 5.39 -26.71 -0.14 0.26 16 28 H 0.08 -0.38 7.92 -51.93 -0.41 -0.79 16 29 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.08 -0.18 6.91 -51.93 -0.36 -0.54 16 31 H 0.10 -0.30 6.31 -51.93 -0.33 -0.63 16 32 H 0.13 -0.33 5.43 -52.49 -0.29 -0.62 16 33 H 0.13 -0.23 4.87 -52.48 -0.26 -0.49 16 34 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 35 H 0.38 -1.00 8.74 45.56 0.40 -0.60 16 36 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 37 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 38 H 0.13 0.11 8.06 -52.48 -0.42 -0.31 16 39 H 0.14 0.25 8.06 -52.48 -0.42 -0.17 16 40 H 0.40 -2.08 8.38 -40.82 -0.34 -2.42 16 41 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 42 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.08 0.05 6.50 -51.93 -0.34 -0.29 16 44 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 45 H 0.17 -0.79 8.14 -51.93 -0.42 -1.21 16 46 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 48 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 49 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 LS Contribution 400.07 15.07 6.03 6.03 Total: 0.00 -10.28 400.07 -9.75 -20.04 By element: Atomic # 1 Polarization: -6.73 SS G_CDS: -6.95 Total: -13.68 kcal Atomic # 6 Polarization: 0.79 SS G_CDS: -2.16 Total: -1.37 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -0.27 Total: 1.20 kcal Atomic # 8 Polarization: -4.83 SS G_CDS: -1.41 Total: -6.24 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.07 Total: -0.23 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.06 Total: -5.75 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -10.28 -9.75 -20.04 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -215.505 kcal (2) G-P(sol) polarization free energy of solvation -10.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -225.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.753 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.037 kcal (6) G-S(sol) free energy of system = (1) + (5) -235.542 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds