Wall clock time and date at job start Sun Mar 7 2021 05:45:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.37647 * 125.67896 * 2 1 4 4 C 1.46682 * 126.23264 * 359.96621 * 3 2 1 5 5 O 1.21696 * 120.00071 * 4.28449 * 4 3 2 6 6 N 1.34779 * 119.99941 * 184.29385 * 4 3 2 7 7 C 1.46504 * 119.99925 * 174.61038 * 6 4 3 8 8 H 1.09000 * 109.47249 * 325.00258 * 7 6 4 9 9 C 1.53008 * 109.46836 * 84.99920 * 7 6 4 10 10 C 1.53001 * 109.46906 * 180.02562 * 9 7 6 11 11 C 1.52999 * 109.46867 * 300.00119 * 10 9 7 12 12 H 1.09000 * 109.47065 * 299.99646 * 11 10 9 13 13 O 1.42899 * 109.46837 * 180.02562 * 11 10 9 14 14 C 1.42902 * 114.00052 * 149.99692 * 13 11 10 15 15 F 1.39895 * 109.47193 * 299.99677 * 14 13 11 16 16 F 1.39904 * 109.47038 * 60.00202 * 14 13 11 17 17 C 1.52995 * 109.47544 * 59.99984 * 11 10 9 18 18 C 1.52997 * 109.46956 * 204.99469 * 7 6 4 19 19 C 1.37866 * 107.53588 * 179.70003 * 3 2 1 20 20 C 1.39832 * 107.08592 * 0.26216 * 19 3 2 21 21 C 1.35451 * 107.86230 * 359.97438 * 20 19 3 22 22 C 1.50705 * 125.56582 * 180.02562 * 21 20 19 23 23 O 1.42899 * 109.47281 * 209.97820 * 22 21 20 24 24 Si 1.86301 * 109.47068 * 329.97421 * 22 21 20 25 25 H 1.08999 * 109.46835 * 91.26220 * 1 2 3 26 26 H 1.08997 * 109.47123 * 211.26651 * 1 2 3 27 27 H 1.09003 * 109.46692 * 331.26641 * 1 2 3 28 28 H 0.96999 * 120.00229 * 354.61143 * 6 4 3 29 29 H 1.09000 * 109.46744 * 299.99884 * 9 7 6 30 30 H 1.09000 * 109.46892 * 59.99583 * 9 7 6 31 31 H 1.09000 * 109.46989 * 59.99812 * 10 9 7 32 32 H 1.08997 * 109.46977 * 179.97438 * 10 9 7 33 33 H 1.09003 * 109.47107 * 179.97438 * 14 13 11 34 34 H 1.09005 * 109.47263 * 180.02562 * 17 11 10 35 35 H 1.09000 * 109.47216 * 59.99754 * 17 11 10 36 36 H 1.09000 * 109.47493 * 299.99997 * 18 7 6 37 37 H 1.08997 * 109.46998 * 60.00440 * 18 7 6 38 38 H 1.08007 * 126.46127 * 180.22606 * 19 3 2 39 39 H 1.08000 * 126.07086 * 179.97438 * 20 19 3 40 40 H 1.08998 * 109.47095 * 89.97453 * 22 21 20 41 41 H 0.96695 * 114.00635 * 59.99581 * 23 22 21 42 42 H 1.48506 * 109.99941 * 58.67790 * 24 22 21 43 43 H 1.48492 * 110.00323 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8124 2.5124 -0.0007 5 8 0.6245 2.7646 0.0774 6 7 2.7097 3.5144 -0.0880 7 6 2.2505 4.9004 -0.2077 8 1 1.3369 4.9306 -0.8014 9 6 1.9722 5.4676 1.1858 10 6 1.4921 6.9150 1.0607 11 6 2.5729 7.7533 0.3753 12 1 3.4867 7.7237 0.9689 13 8 2.1248 9.1052 0.2591 14 6 3.1775 10.0712 0.2889 15 9 3.8702 9.9687 1.4999 16 9 4.0571 9.8351 -0.7731 17 6 2.8513 7.1862 -1.0181 18 6 3.3319 5.7385 -0.8928 19 6 3.5780 0.6888 0.0069 20 6 3.5522 -0.7093 0.0049 21 6 2.2555 -1.1009 -0.0024 22 6 1.7709 -2.5279 -0.0062 23 8 0.5163 -2.6030 -0.6862 24 14 3.0158 -3.6042 -0.8794 25 1 -0.3633 -0.0226 -1.0274 26 1 -0.3633 -0.8784 0.5334 27 1 -0.3633 0.9012 0.4941 28 1 3.6594 3.3178 -0.0716 29 1 1.2018 4.8705 1.6738 30 1 2.8858 5.4374 1.7795 31 1 0.5784 6.9446 0.4671 32 1 1.2934 7.3189 2.0534 33 1 2.7553 11.0717 0.1949 34 1 3.6217 7.7832 -1.5062 35 1 1.9376 7.2159 -1.6117 36 1 4.2455 5.7084 -0.2990 37 1 3.5302 5.3344 -1.8855 38 1 4.4584 1.3144 0.0121 39 1 4.4133 -1.3611 0.0086 40 1 1.6490 -2.8729 1.0205 41 1 0.5499 -2.3107 -1.6073 42 1 4.3334 -3.5100 -0.2007 43 1 2.5494 -5.0139 -0.8906 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:45:12 Heat of formation + Delta-G solvation = -180.773065 kcal Electronic energy + Delta-G solvation = -28906.499704 eV Core-core repulsion = 24396.140833 eV Total energy + Delta-G solvation = -4510.358872 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.143 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.09689 -48.19756 -42.58667 -40.91148 -39.64969 -37.86931 -37.60486 -35.00275 -33.68604 -32.00197 -31.65939 -29.87835 -27.45266 -26.95384 -26.16197 -24.01517 -23.66804 -22.70696 -21.46005 -21.30615 -20.35280 -19.40581 -18.96090 -18.78689 -18.65937 -18.13328 -17.33284 -16.91199 -16.61904 -16.07499 -15.98151 -15.70561 -15.41935 -15.30606 -15.11968 -14.97467 -14.80270 -14.63485 -14.49706 -14.44219 -14.31807 -14.17642 -13.81368 -13.72046 -13.49132 -13.30745 -13.23311 -12.99280 -12.66190 -12.51215 -12.26072 -12.25528 -12.21089 -12.01959 -11.50918 -11.14333 -10.99429 -10.71224 -10.14600 -9.74386 -9.09093 -5.05539 0.42105 1.09346 1.49684 1.67394 1.68372 1.89099 1.97253 2.35755 2.40169 2.64456 3.19374 3.39450 3.47004 3.53076 3.53562 3.73354 3.79037 3.87040 3.95738 3.99341 4.00549 4.12340 4.23179 4.29878 4.30990 4.34925 4.42472 4.47320 4.51301 4.61338 4.77593 4.80988 4.89740 4.98320 4.98969 5.03397 5.09966 5.14595 5.16796 5.41981 5.55811 5.70150 5.98170 6.14038 6.34345 6.46526 7.18063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.390 5.390 3 C -0.053 4.053 4 C 0.592 3.408 5 O -0.544 6.544 6 N -0.716 5.716 7 C 0.147 3.853 8 H 0.093 0.907 9 C -0.127 4.127 10 C -0.111 4.111 11 C 0.077 3.923 12 H 0.075 0.925 13 O -0.378 6.378 14 C 0.404 3.596 15 F -0.208 7.208 16 F -0.207 7.207 17 C -0.140 4.140 18 C -0.124 4.124 19 C -0.135 4.135 20 C -0.205 4.205 21 C 0.015 3.985 22 C -0.050 4.050 23 O -0.543 6.543 24 Si 0.723 3.277 25 H 0.076 0.924 26 H 0.093 0.907 27 H 0.100 0.900 28 H 0.403 0.597 29 H 0.079 0.921 30 H 0.068 0.932 31 H 0.078 0.922 32 H 0.077 0.923 33 H 0.168 0.832 34 H 0.082 0.918 35 H 0.079 0.921 36 H 0.072 0.928 37 H 0.079 0.921 38 H 0.146 0.854 39 H 0.147 0.853 40 H 0.119 0.881 41 H 0.380 0.620 42 H -0.252 1.252 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.558 0.444 -2.656 3.714 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.062 5.062 3 C -0.167 4.167 4 C 0.381 3.619 5 O -0.423 6.423 6 N -0.367 5.367 7 C 0.043 3.957 8 H 0.111 0.889 9 C -0.166 4.166 10 C -0.149 4.149 11 C 0.020 3.980 12 H 0.093 0.907 13 O -0.300 6.300 14 C 0.312 3.688 15 F -0.190 7.190 16 F -0.189 7.189 17 C -0.179 4.179 18 C -0.162 4.162 19 C -0.161 4.161 20 C -0.229 4.229 21 C -0.103 4.103 22 C -0.160 4.160 23 O -0.348 6.348 24 Si 0.622 3.378 25 H 0.095 0.905 26 H 0.111 0.889 27 H 0.119 0.881 28 H 0.238 0.762 29 H 0.098 0.902 30 H 0.087 0.913 31 H 0.097 0.903 32 H 0.096 0.904 33 H 0.184 0.816 34 H 0.100 0.900 35 H 0.097 0.903 36 H 0.091 0.909 37 H 0.098 0.902 38 H 0.163 0.837 39 H 0.164 0.836 40 H 0.136 0.864 41 H 0.228 0.772 42 H -0.176 1.176 43 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 1.476 -0.216 -1.987 2.484 hybrid contribution 0.631 0.231 0.666 0.946 sum 2.108 0.014 -1.321 2.487 Atomic orbital electron populations 1.22397 0.75419 1.05641 1.04155 1.43757 1.07028 1.04000 1.51459 1.20021 0.90492 0.87478 1.18669 1.16975 0.85578 0.83498 0.75895 1.90801 1.16250 1.84807 1.50452 1.45679 1.09831 1.05929 1.75287 1.21064 0.98548 0.79329 0.96740 0.88922 1.21908 1.02494 0.95058 0.97128 1.21534 0.98183 0.93577 1.01609 1.22417 0.98661 0.79938 0.96943 0.90655 1.88455 1.31989 1.16875 1.92659 1.23212 0.77972 0.96049 0.71572 1.93068 1.81599 1.96990 1.47356 1.93061 1.72152 1.95718 1.58013 1.22116 1.03248 0.95615 0.96873 1.21774 0.98162 0.94497 1.01776 1.21279 0.94390 0.95165 1.05252 1.20644 0.95081 0.95433 1.11750 1.21123 0.90942 0.89218 1.08997 1.24974 0.94275 0.94556 1.02242 1.86493 1.30142 1.89049 1.29157 0.94006 0.76342 0.77703 0.89704 0.90542 0.88861 0.88109 0.76168 0.90195 0.91310 0.90294 0.90440 0.81558 0.89967 0.90266 0.90920 0.90225 0.83662 0.83559 0.86384 0.77205 1.17642 1.17778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.06 9.40 59.85 0.56 0.62 16 2 N -0.39 -0.68 3.16 -115.62 -0.37 -1.05 16 3 C -0.05 -0.10 6.89 -81.98 -0.56 -0.66 16 4 C 0.59 1.39 7.73 -12.85 -0.10 1.29 16 5 O -0.54 -2.86 14.28 5.19 0.07 -2.78 16 6 N -0.72 0.45 5.06 -55.11 -0.28 0.17 16 7 C 0.15 -0.11 2.41 -67.93 -0.16 -0.27 16 8 H 0.09 0.09 7.66 -51.93 -0.40 -0.31 16 9 C -0.13 0.06 5.49 -26.73 -0.15 -0.09 16 10 C -0.11 0.05 5.57 -26.73 -0.15 -0.10 16 11 C 0.08 -0.03 2.40 -26.73 -0.06 -0.09 16 12 H 0.08 -0.02 7.20 -51.93 -0.37 -0.39 16 13 O -0.38 -0.15 10.29 -35.23 -0.36 -0.51 16 14 C 0.40 -0.39 6.26 101.05 0.63 0.24 16 15 F -0.21 -0.19 16.63 2.25 0.04 -0.15 16 16 F -0.21 -0.09 15.46 2.25 0.03 -0.05 16 17 C -0.14 0.16 5.40 -26.71 -0.14 0.02 16 18 C -0.12 0.28 5.39 -26.71 -0.14 0.13 16 19 C -0.13 -0.03 10.35 -39.12 -0.41 -0.43 16 20 C -0.21 -0.07 9.37 -39.98 -0.37 -0.44 16 21 C 0.02 0.01 6.14 -81.95 -0.50 -0.49 16 22 C -0.05 0.04 2.88 36.01 0.10 0.14 16 23 O -0.54 0.46 10.43 -35.23 -0.37 0.09 16 24 Si 0.72 -1.40 31.29 -169.99 -5.32 -6.72 16 25 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 26 H 0.09 0.05 6.90 -51.93 -0.36 -0.31 16 27 H 0.10 0.26 6.16 -51.93 -0.32 -0.06 16 28 H 0.40 -1.19 7.50 -40.82 -0.31 -1.50 16 29 H 0.08 0.11 8.08 -51.93 -0.42 -0.31 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.17 -0.78 8.14 -51.93 -0.42 -1.20 16 34 H 0.08 -0.06 6.50 -51.93 -0.34 -0.40 16 35 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 36 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 37 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 38 H 0.15 -0.37 7.45 -52.48 -0.39 -0.76 16 39 H 0.15 -0.14 6.62 -52.49 -0.35 -0.49 16 40 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 41 H 0.38 -1.56 8.70 45.56 0.40 -1.16 16 42 H -0.25 -0.01 6.76 56.52 0.38 0.37 16 43 H -0.25 -0.28 7.11 56.52 0.40 0.13 16 LS Contribution 352.05 15.07 5.31 5.31 Total: 0.00 -7.66 352.05 -8.57 -16.23 By element: Atomic # 1 Polarization: -4.53 SS G_CDS: -5.87 Total: -10.40 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -1.46 Total: -0.14 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.64 Total: -0.88 kcal Atomic # 8 Polarization: -2.54 SS G_CDS: -0.66 Total: -3.20 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.07 Total: -0.20 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.32 Total: -6.72 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -7.66 -8.57 -16.23 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -164.543 kcal (2) G-P(sol) polarization free energy of solvation -7.660 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.204 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.773 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds