Wall clock time and date at job start Sun Mar 7 2021 05:45:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35657 * 117.00047 * 2 1 4 4 C 1.38409 * 120.11968 * 359.97438 * 3 2 1 5 5 C 1.38726 * 120.03402 * 180.02562 * 4 3 2 6 6 O 1.35714 * 119.85989 * 179.97438 * 5 4 3 7 7 C 1.42899 * 117.00448 * 359.97438 * 6 5 4 8 8 C 1.39145 * 120.27377 * 359.97438 * 5 4 3 9 9 C 1.50698 * 119.87859 * 180.02562 * 8 5 4 10 10 O 1.42898 * 109.47193 * 74.99759 * 9 8 5 11 11 Si 1.86297 * 109.46866 * 195.00055 * 9 8 5 12 12 C 1.37586 * 120.23680 * 359.74059 * 8 5 4 13 13 C 1.39818 * 119.96585 * 0.51361 * 12 8 5 14 14 C 1.47300 * 120.13179 * 179.76238 * 13 12 8 15 15 O 1.21623 * 119.99780 * 179.72360 * 14 13 12 16 16 N 1.34777 * 120.00251 * 359.72818 * 14 13 12 17 17 C 1.46498 * 119.99828 * 180.27604 * 16 14 13 18 18 H 1.09004 * 109.47372 * 34.71852 * 17 16 14 19 19 C 1.52999 * 109.46963 * 154.72290 * 17 16 14 20 20 C 1.53003 * 109.47087 * 179.97438 * 19 17 16 21 21 C 1.52997 * 109.47241 * 300.00042 * 20 19 17 22 22 H 1.08995 * 109.47096 * 299.99819 * 21 20 19 23 23 O 1.42898 * 109.47199 * 179.97438 * 21 20 19 24 24 C 1.42899 * 114.00015 * 149.99795 * 23 21 20 25 25 F 1.39893 * 109.47524 * 300.00208 * 24 23 21 26 26 F 1.39906 * 109.47154 * 60.00173 * 24 23 21 27 27 C 1.52999 * 109.47114 * 59.99975 * 21 20 19 28 28 C 1.52997 * 109.47036 * 274.72131 * 17 16 14 29 29 H 1.08995 * 109.47540 * 299.99901 * 1 2 3 30 30 H 1.08998 * 109.47565 * 60.00273 * 1 2 3 31 31 H 1.09007 * 109.46705 * 179.97438 * 1 2 3 32 32 H 1.08003 * 119.97930 * 0.02562 * 4 3 2 33 33 H 1.09002 * 109.46931 * 59.99814 * 7 6 5 34 34 H 1.08997 * 109.47057 * 180.02562 * 7 6 5 35 35 H 1.09004 * 109.46739 * 300.00198 * 7 6 5 36 36 H 1.09003 * 109.46905 * 314.99380 * 9 8 5 37 37 H 0.96705 * 113.99833 * 180.02562 * 10 9 8 38 38 H 1.48499 * 109.99841 * 178.67886 * 11 9 8 39 39 H 1.48499 * 110.00014 * 299.99578 * 11 9 8 40 40 H 1.07999 * 120.01242 * 180.25483 * 12 8 5 41 41 H 0.97001 * 119.99727 * 359.97438 * 16 14 13 42 42 H 1.08997 * 109.46923 * 299.99333 * 19 17 16 43 43 H 1.08995 * 109.47266 * 59.99845 * 19 17 16 44 44 H 1.09004 * 109.47044 * 59.99688 * 20 19 17 45 45 H 1.08997 * 109.47066 * 179.97438 * 20 19 17 46 46 H 1.09004 * 109.47165 * 179.97438 * 24 23 21 47 47 H 1.08995 * 109.47266 * 59.99948 * 27 21 20 48 48 H 1.09000 * 109.47204 * 180.02562 * 27 21 20 49 49 H 1.09009 * 109.47238 * 300.00198 * 28 17 16 50 50 H 1.08997 * 109.47293 * 60.00168 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 1.2934 2.3711 -0.0005 5 6 1.9251 3.6062 -0.0011 6 8 1.1849 4.7437 -0.0021 7 6 -0.2362 4.5931 -0.0032 8 6 3.3144 3.6836 -0.0005 9 6 3.9913 5.0300 -0.0005 10 8 3.8931 5.6125 1.3006 11 14 5.7862 4.8225 -0.4544 12 6 4.0723 2.5353 0.0059 13 6 3.4460 1.2852 0.0011 14 6 4.2539 0.0535 0.0027 15 8 3.7066 -1.0327 0.0036 16 7 5.5995 0.1300 0.0033 17 6 6.4028 -1.0950 -0.0013 18 1 5.8959 -1.8599 -0.5896 19 6 7.7734 -0.8038 -0.6158 20 6 8.6127 -2.0831 -0.6200 21 6 8.7927 -2.5796 0.8159 22 1 9.2995 -1.8146 1.4040 23 8 9.5761 -3.7748 0.8120 24 6 10.3608 -3.9593 1.9919 25 9 11.2462 -2.8858 2.1358 26 9 9.5184 -4.0216 3.1072 27 6 7.4222 -2.8708 1.4305 28 6 6.5829 -1.5921 1.4344 29 1 -0.3634 0.5138 0.8899 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0278 -0.0005 32 1 0.2148 2.3164 -0.0005 33 1 -0.5440 4.0441 0.8868 34 1 -0.7058 5.5767 -0.0044 35 1 -0.5426 4.0434 -0.8932 36 1 3.5056 5.6808 -0.7276 37 1 4.3082 6.4828 1.3742 38 1 6.4576 6.1466 -0.4891 39 1 6.4598 3.9372 0.5293 40 1 5.1503 2.5996 0.0105 41 1 6.0359 0.9963 0.0022 42 1 7.6451 -0.4498 -1.6387 43 1 8.2803 -0.0390 -0.0275 44 1 8.1059 -2.8482 -1.2081 45 1 9.5889 -1.8757 -1.0582 46 1 10.9254 -4.8882 1.9112 47 1 6.9154 -3.6359 0.8423 48 1 7.5504 -3.2242 2.4536 49 1 7.0899 -0.8272 2.0229 50 1 5.6066 -1.7995 1.8723 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:45:23 Heat of formation + Delta-G solvation = -264.822780 kcal Electronic energy + Delta-G solvation = -37524.504953 eV Core-core repulsion = 32154.799179 eV Total energy + Delta-G solvation = -5369.705773 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.162 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -50.04031 -48.14129 -42.01606 -40.86977 -40.07951 -39.49187 -38.38463 -37.57207 -37.05521 -34.64700 -32.32227 -31.93137 -31.87055 -29.76649 -29.05377 -28.16726 -26.40535 -26.03400 -24.65221 -23.87744 -23.33561 -22.38111 -21.38855 -21.02856 -19.96201 -19.35701 -18.85509 -18.61548 -18.52897 -18.47204 -18.12921 -17.32153 -17.05476 -16.83315 -16.54352 -16.39332 -16.24195 -15.82847 -15.75154 -15.59068 -15.46330 -15.33528 -14.98978 -14.93752 -14.54846 -14.35702 -14.29624 -14.23207 -14.10737 -13.86248 -13.72019 -13.62765 -13.45667 -13.37015 -13.26136 -12.90089 -12.77535 -12.59245 -12.51094 -12.36177 -12.20208 -12.14760 -11.93994 -11.89132 -11.60454 -11.48568 -11.02206 -10.64470 -10.42872 -9.95238 -9.85361 -9.08779 -5.05215 -0.14257 0.16237 1.21252 1.48788 1.83379 1.91223 1.92702 2.07677 2.18307 2.23254 2.69989 2.73318 3.32444 3.47336 3.50406 3.55691 3.65667 3.68845 3.76922 3.82675 3.87466 3.98153 3.99647 4.03041 4.06775 4.11842 4.14377 4.16189 4.16668 4.18591 4.25334 4.35400 4.40084 4.42934 4.45831 4.55340 4.59767 4.69445 4.83585 4.86626 4.95388 4.97014 5.06362 5.09260 5.15099 5.24021 5.28650 5.34538 5.59703 5.62653 6.03148 6.32105 6.48890 6.62339 7.43428 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.234 3.766 4 C -0.314 4.314 5 C 0.222 3.778 6 O -0.298 6.298 7 C 0.022 3.978 8 C -0.150 4.150 9 C -0.059 4.059 10 O -0.532 6.532 11 Si 0.677 3.323 12 C -0.007 4.007 13 C -0.209 4.209 14 C 0.568 3.432 15 O -0.517 6.517 16 N -0.730 5.730 17 C 0.145 3.855 18 H 0.095 0.905 19 C -0.125 4.125 20 C -0.109 4.109 21 C 0.077 3.923 22 H 0.075 0.925 23 O -0.378 6.378 24 C 0.404 3.596 25 F -0.209 7.209 26 F -0.207 7.207 27 C -0.141 4.141 28 C -0.127 4.127 29 H 0.057 0.943 30 H 0.058 0.942 31 H 0.107 0.893 32 H 0.145 0.855 33 H 0.059 0.941 34 H 0.106 0.894 35 H 0.060 0.940 36 H 0.077 0.923 37 H 0.378 0.622 38 H -0.257 1.257 39 H -0.252 1.252 40 H 0.140 0.860 41 H 0.396 0.604 42 H 0.083 0.917 43 H 0.071 0.929 44 H 0.080 0.920 45 H 0.079 0.921 46 H 0.168 0.832 47 H 0.078 0.922 48 H 0.078 0.922 49 H 0.065 0.935 50 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.814 3.060 -3.521 4.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.175 3.825 6 O -0.209 6.209 7 C -0.073 4.073 8 C -0.151 4.151 9 C -0.169 4.169 10 O -0.339 6.339 11 Si 0.578 3.422 12 C -0.026 4.026 13 C -0.213 4.213 14 C 0.356 3.644 15 O -0.392 6.392 16 N -0.383 5.383 17 C 0.041 3.959 18 H 0.113 0.887 19 C -0.163 4.163 20 C -0.147 4.147 21 C 0.020 3.980 22 H 0.093 0.907 23 O -0.300 6.300 24 C 0.312 3.688 25 F -0.191 7.191 26 F -0.189 7.189 27 C -0.179 4.179 28 C -0.166 4.166 29 H 0.076 0.924 30 H 0.076 0.924 31 H 0.125 0.875 32 H 0.163 0.837 33 H 0.078 0.922 34 H 0.124 0.876 35 H 0.078 0.922 36 H 0.095 0.905 37 H 0.225 0.775 38 H -0.182 1.182 39 H -0.177 1.177 40 H 0.157 0.843 41 H 0.231 0.769 42 H 0.101 0.899 43 H 0.090 0.910 44 H 0.099 0.901 45 H 0.098 0.902 46 H 0.184 0.816 47 H 0.096 0.904 48 H 0.096 0.904 49 H 0.084 0.916 50 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.593 1.718 -3.279 3.749 hybrid contribution -0.603 1.690 1.227 2.174 sum -1.196 3.409 -2.052 4.155 Atomic orbital electron populations 1.23238 0.78274 1.04823 1.01323 1.86399 1.21140 1.25018 1.85798 1.18713 0.90621 0.84391 0.87781 1.21275 1.01100 0.91438 1.19541 1.18695 0.90369 0.84703 0.88771 1.86125 1.19451 1.28630 1.86692 1.23209 0.77835 1.04588 1.01688 1.18305 0.90103 0.94162 1.12551 1.24534 1.10608 0.93627 0.88088 1.86623 1.80118 1.37397 1.29792 0.95337 0.74516 0.83164 0.89141 1.20831 0.99296 0.89972 0.92474 1.19022 0.90650 0.93509 1.18122 1.17780 0.81713 0.88554 0.76349 1.90848 1.71343 1.28597 1.48455 1.45950 1.05970 1.09478 1.76909 1.21021 0.90917 0.87236 0.96723 0.88711 1.21795 0.94356 0.97850 1.02338 1.21503 1.01217 0.97328 0.94694 1.22422 0.91324 0.85653 0.98580 0.90733 1.88440 1.59198 1.44456 1.37917 1.23200 0.80264 0.89756 0.75574 1.93063 1.69323 1.61171 1.95521 1.93068 1.73252 1.96836 1.55746 1.22112 0.94740 0.98612 1.02446 1.21882 1.00953 0.96938 0.96846 0.92446 0.92361 0.87488 0.83743 0.92248 0.87570 0.92178 0.90523 0.77471 1.18190 1.17675 0.84296 0.76931 0.89874 0.90986 0.90149 0.90228 0.81593 0.90354 0.90364 0.91625 0.90470 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.27 -1.05 8.56 -40.59 -0.35 -1.40 16 3 C 0.23 0.74 6.70 -38.73 -0.26 0.48 16 4 C -0.31 -0.42 8.01 -39.34 -0.31 -0.73 16 5 C 0.22 0.43 6.67 -39.06 -0.26 0.17 16 6 O -0.30 -0.42 9.80 -18.85 -0.18 -0.60 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.15 -0.24 5.30 -104.52 -0.55 -0.79 16 9 C -0.06 -0.01 2.36 36.00 0.08 0.07 16 10 O -0.53 -0.83 12.86 -35.23 -0.45 -1.28 16 11 Si 0.68 -1.10 30.20 -169.99 -5.13 -6.23 16 12 C -0.01 -0.01 8.14 -39.23 -0.32 -0.33 16 13 C -0.21 -0.61 5.89 -104.84 -0.62 -1.23 16 14 C 0.57 2.18 7.72 -12.58 -0.10 2.08 16 15 O -0.52 -3.80 14.81 -16.66 -0.25 -4.05 16 16 N -0.73 -0.50 5.03 -54.92 -0.28 -0.78 16 17 C 0.15 0.05 2.46 -67.93 -0.17 -0.11 16 18 H 0.09 0.19 7.57 -51.93 -0.39 -0.20 16 19 C -0.13 0.23 5.39 -26.73 -0.14 0.09 16 20 C -0.11 0.12 5.57 -26.73 -0.15 -0.03 16 21 C 0.08 0.02 2.40 -26.73 -0.06 -0.04 16 22 H 0.07 0.03 7.20 -51.93 -0.37 -0.34 16 23 O -0.38 -0.35 10.29 -35.23 -0.36 -0.71 16 24 C 0.40 -0.12 6.26 101.05 0.63 0.52 16 25 F -0.21 -0.29 16.63 2.25 0.04 -0.25 16 26 F -0.21 -0.32 15.46 2.25 0.03 -0.29 16 27 C -0.14 -0.12 5.39 -26.75 -0.14 -0.27 16 28 C -0.13 -0.13 5.49 -26.75 -0.15 -0.27 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 31 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.15 -0.15 4.50 -52.48 -0.24 -0.39 16 33 H 0.06 -0.16 7.65 -51.93 -0.40 -0.55 16 34 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 35 H 0.06 -0.20 7.65 -51.93 -0.40 -0.60 16 36 H 0.08 -0.05 7.82 -51.93 -0.41 -0.46 16 37 H 0.38 -0.92 8.74 45.56 0.40 -0.52 16 38 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 39 H -0.25 -0.03 6.74 56.52 0.38 0.35 16 40 H 0.14 -0.18 3.20 -52.49 -0.17 -0.35 16 41 H 0.40 -0.67 6.62 -40.82 -0.27 -0.94 16 42 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 43 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 44 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 46 H 0.17 -0.68 8.14 -51.93 -0.42 -1.11 16 47 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 48 H 0.08 0.13 6.50 -51.93 -0.34 -0.21 16 49 H 0.07 0.03 8.14 -51.92 -0.42 -0.39 16 50 H 0.08 0.23 8.14 -51.93 -0.42 -0.19 16 LS Contribution 405.02 15.07 6.10 6.10 Total: 0.00 -10.39 405.02 -8.19 -18.58 By element: Atomic # 1 Polarization: -3.81 SS G_CDS: -6.82 Total: -10.64 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -0.54 Total: 1.53 kcal Atomic # 7 Polarization: -0.50 SS G_CDS: -0.28 Total: -0.78 kcal Atomic # 8 Polarization: -6.44 SS G_CDS: -1.59 Total: -8.03 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 0.07 Total: -0.54 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.13 Total: -6.23 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -10.39 -8.19 -18.58 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -246.244 kcal (2) G-P(sol) polarization free energy of solvation -10.390 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -256.635 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.579 kcal (6) G-S(sol) free energy of system = (1) + (5) -264.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds