Wall clock time and date at job start Sun Mar 7 2021 05:45:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86294 * 109.47447 * 2 1 4 4 C 1.50702 * 109.47024 * 239.99316 * 2 1 3 5 5 C 1.38234 * 120.00257 * 300.00864 * 4 2 1 6 6 C 1.38238 * 119.99675 * 180.25732 * 5 4 2 7 7 C 1.38228 * 120.00114 * 359.50218 * 6 5 4 8 8 C 1.50698 * 120.00195 * 180.26174 * 7 6 5 9 9 C 1.50704 * 109.47149 * 270.21448 * 8 7 6 10 10 O 1.21289 * 119.99520 * 359.97438 * 9 8 7 11 11 N 1.34770 * 120.00479 * 179.97438 * 9 8 7 12 12 C 1.46496 * 120.00263 * 179.97438 * 11 9 8 13 13 H 1.09005 * 109.47348 * 35.00696 * 12 11 9 14 14 C 1.53006 * 109.47191 * 155.00329 * 12 11 9 15 15 C 1.53000 * 109.47220 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.46918 * 299.99714 * 15 14 12 17 17 H 1.08999 * 109.47555 * 300.00363 * 16 15 14 18 18 O 1.42905 * 109.47180 * 179.97438 * 16 15 14 19 19 C 1.42897 * 114.00114 * 149.99941 * 18 16 15 20 20 F 1.39901 * 109.47246 * 300.00906 * 19 18 16 21 21 F 1.39900 * 109.46949 * 60.00150 * 19 18 16 22 22 C 1.53006 * 109.47080 * 60.00485 * 16 15 14 23 23 C 1.52995 * 109.47692 * 275.00619 * 12 11 9 24 24 C 1.38234 * 120.00051 * 0.47390 * 7 6 5 25 25 C 1.38235 * 119.99522 * 119.97877 * 4 2 1 26 26 H 0.96703 * 113.99392 * 300.00469 * 1 2 3 27 27 H 1.09007 * 109.47102 * 119.99865 * 2 1 3 28 28 H 1.48508 * 110.00053 * 178.68094 * 3 2 1 29 29 H 1.48502 * 109.99983 * 299.99633 * 3 2 1 30 30 H 1.08002 * 119.99744 * 359.97115 * 5 4 2 31 31 H 1.08004 * 119.99577 * 179.72816 * 6 5 4 32 32 H 1.08999 * 109.47413 * 30.20823 * 8 7 6 33 33 H 1.08995 * 109.47567 * 150.21591 * 8 7 6 34 34 H 0.96998 * 120.00028 * 0.02562 * 11 9 8 35 35 H 1.09000 * 109.46621 * 300.00473 * 14 12 11 36 36 H 1.08991 * 109.46881 * 60.00048 * 14 12 11 37 37 H 1.09002 * 109.47087 * 59.99745 * 15 14 12 38 38 H 1.08997 * 109.47282 * 179.97438 * 15 14 12 39 39 H 1.08994 * 109.47343 * 180.02562 * 19 18 16 40 40 H 1.08999 * 109.47026 * 59.99555 * 22 16 15 41 41 H 1.08997 * 109.46833 * 180.02562 * 22 16 15 42 42 H 1.09002 * 109.46797 * 299.99651 * 23 12 11 43 43 H 1.08997 * 109.47114 * 59.99495 * 23 12 11 44 44 H 1.08001 * 120.00294 * 179.78842 * 24 7 6 45 45 H 1.07996 * 120.00471 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7106 -1.2304 5 6 1.5972 -2.0340 -1.4491 6 6 2.0625 -2.6872 -2.5751 7 6 2.8532 -2.0141 -3.4875 8 6 3.3555 -2.7245 -4.7179 9 6 4.6832 -3.3711 -4.4178 10 8 5.1735 -3.2651 -3.3135 11 7 5.3258 -4.0673 -5.3764 12 6 6.6168 -4.6953 -5.0848 13 1 6.6243 -5.0488 -4.0536 14 6 6.8338 -5.8781 -6.0308 15 6 8.1818 -6.5345 -5.7258 16 6 9.3029 -5.5120 -5.9223 17 1 9.2958 -5.1586 -6.9533 18 8 10.5619 -6.1249 -5.6368 19 6 11.6548 -5.5810 -6.3797 20 9 11.4162 -5.7456 -7.7483 21 9 11.7837 -4.2185 -6.0895 22 6 9.0860 -4.3293 -4.9762 23 6 7.7376 -3.6727 -5.2814 24 6 3.1868 -0.6906 -3.2690 25 6 2.7257 -0.0387 -2.1406 26 1 -0.3932 0.4418 0.7651 27 1 1.7923 -0.5138 0.8900 28 1 3.5347 1.7701 0.0321 29 1 1.5617 2.4678 -1.2086 30 1 0.9766 -2.5589 -0.7380 31 1 1.8050 -3.7225 -2.7438 32 1 2.6377 -3.4894 -5.0144 33 1 3.4763 -2.0060 -5.5285 34 1 4.9339 -4.1518 -6.2596 35 1 6.0352 -6.6067 -5.8906 36 1 6.8263 -5.5248 -7.0618 37 1 8.1888 -6.8879 -4.6947 38 1 8.3362 -7.3774 -6.3995 39 1 12.5737 -6.0996 -6.1064 40 1 9.0930 -4.6827 -3.9451 41 1 9.8844 -3.6007 -5.1164 42 1 7.7302 -3.3194 -6.3126 43 1 7.5830 -2.8301 -4.6075 44 1 3.8075 -0.1656 -3.9801 45 1 2.9866 0.9953 -1.9698 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:45:31 Heat of formation + Delta-G solvation = -208.017325 kcal Electronic energy + Delta-G solvation = -29542.218645 eV Core-core repulsion = 24967.878144 eV Total energy + Delta-G solvation = -4574.340501 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.148 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.10423 -48.20423 -41.36394 -40.50003 -39.68546 -37.84025 -37.46049 -34.78869 -34.10840 -32.01807 -31.92522 -30.69853 -29.17541 -26.50562 -25.56998 -24.02260 -23.81014 -23.37208 -21.95245 -21.50652 -21.04575 -19.43042 -18.89870 -18.68079 -18.36714 -18.09750 -17.76333 -17.18037 -16.88389 -16.38665 -16.23496 -15.94540 -15.69754 -15.32789 -15.15835 -14.97474 -14.91090 -14.73678 -14.60262 -14.43296 -14.35118 -14.24907 -13.76053 -13.71278 -13.56318 -13.42453 -13.34276 -13.18880 -12.92273 -12.79753 -12.46179 -12.31364 -12.17271 -12.04950 -11.94775 -11.77092 -11.60028 -11.13303 -10.85702 -10.31769 -10.09910 -9.82862 -9.54166 -4.94145 0.27228 0.49885 1.32118 1.64675 1.67879 1.84920 2.01509 2.10866 2.63215 2.77989 3.39393 3.42261 3.42633 3.56628 3.59922 3.72206 3.79315 3.85535 3.89547 3.92982 3.96900 4.03494 4.04311 4.04729 4.20705 4.25050 4.28925 4.37888 4.45557 4.47542 4.50419 4.58185 4.71245 4.76896 4.85135 4.95590 5.00178 5.03600 5.09345 5.10926 5.16459 5.39895 5.43988 5.53889 5.58247 5.60608 6.02192 6.43911 6.64470 7.22217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.072 4.072 3 Si 0.683 3.317 4 C -0.074 4.074 5 C -0.087 4.087 6 C -0.102 4.102 7 C -0.064 4.064 8 C -0.103 4.103 9 C 0.515 3.485 10 O -0.526 6.526 11 N -0.730 5.730 12 C 0.142 3.858 13 H 0.092 0.908 14 C -0.123 4.123 15 C -0.110 4.110 16 C 0.078 3.922 17 H 0.075 0.925 18 O -0.379 6.379 19 C 0.404 3.596 20 F -0.208 7.208 21 F -0.207 7.207 22 C -0.142 4.142 23 C -0.126 4.126 24 C -0.098 4.098 25 C -0.122 4.122 26 H 0.382 0.618 27 H 0.075 0.925 28 H -0.255 1.255 29 H -0.251 1.251 30 H 0.128 0.872 31 H 0.124 0.876 32 H 0.106 0.894 33 H 0.105 0.895 34 H 0.401 0.599 35 H 0.080 0.920 36 H 0.072 0.928 37 H 0.079 0.921 38 H 0.080 0.920 39 H 0.168 0.832 40 H 0.077 0.923 41 H 0.079 0.921 42 H 0.066 0.934 43 H 0.075 0.925 44 H 0.123 0.877 45 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.312 -0.947 -1.043 1.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.183 4.183 3 Si 0.584 3.416 4 C -0.074 4.074 5 C -0.105 4.105 6 C -0.120 4.120 7 C -0.064 4.064 8 C -0.143 4.143 9 C 0.301 3.699 10 O -0.400 6.400 11 N -0.382 5.382 12 C 0.038 3.962 13 H 0.110 0.890 14 C -0.161 4.161 15 C -0.148 4.148 16 C 0.021 3.979 17 H 0.093 0.907 18 O -0.300 6.300 19 C 0.312 3.688 20 F -0.191 7.191 21 F -0.189 7.189 22 C -0.180 4.180 23 C -0.165 4.165 24 C -0.116 4.116 25 C -0.140 4.140 26 H 0.229 0.771 27 H 0.092 0.908 28 H -0.180 1.180 29 H -0.176 1.176 30 H 0.146 0.854 31 H 0.142 0.858 32 H 0.124 0.876 33 H 0.123 0.877 34 H 0.235 0.765 35 H 0.099 0.901 36 H 0.091 0.909 37 H 0.098 0.902 38 H 0.098 0.902 39 H 0.185 0.815 40 H 0.096 0.904 41 H 0.097 0.903 42 H 0.085 0.915 43 H 0.093 0.907 44 H 0.141 0.859 45 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -0.371 -0.703 -1.106 1.362 hybrid contribution -0.016 -0.293 -0.927 0.973 sum -0.387 -0.996 -2.033 2.297 Atomic orbital electron populations 1.86485 1.17251 1.81813 1.49652 1.24694 0.85631 1.10353 0.97578 0.95465 0.80710 0.78070 0.87342 1.19339 0.98230 0.94614 0.95208 1.20940 0.98504 0.93725 0.97357 1.21020 0.97407 0.99573 0.93981 1.19242 0.97757 0.93793 0.95630 1.20691 0.94993 1.00985 0.97629 1.20581 0.86338 0.78369 0.84618 1.90763 1.67664 1.59104 1.22518 1.46073 1.22119 1.54880 1.15153 1.21042 0.82164 0.92235 1.00758 0.88998 1.21770 0.97451 0.97184 0.99725 1.21511 0.91758 0.97618 1.03962 1.22406 0.82303 0.93779 0.99413 0.90688 1.88445 1.16982 1.60528 1.64067 1.23209 0.93513 0.77757 0.74297 1.93067 1.95436 1.95228 1.35321 1.93066 1.96221 1.36680 1.92925 1.22134 0.97974 0.97190 1.00695 1.21877 0.93368 0.98803 1.02430 1.20842 0.99204 0.94291 0.97271 1.20791 0.99478 0.98830 0.94883 0.77067 0.90753 1.18018 1.17563 0.85412 0.85763 0.87587 0.87704 0.76493 0.90117 0.90905 0.90209 0.90174 0.81524 0.90402 0.90283 0.91538 0.90659 0.85863 0.86560 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.58 12.74 -35.23 -0.45 -1.03 16 2 C -0.07 -0.09 2.81 36.01 0.10 0.01 16 3 Si 0.68 0.07 29.79 -169.99 -5.06 -5.00 16 4 C -0.07 -0.28 5.42 -104.62 -0.57 -0.85 16 5 C -0.09 -0.30 9.61 -39.58 -0.38 -0.68 16 6 C -0.10 -0.27 9.70 -39.59 -0.38 -0.65 16 7 C -0.06 -0.15 4.37 -104.63 -0.46 -0.60 16 8 C -0.10 0.09 5.83 -29.03 -0.17 -0.08 16 9 C 0.51 0.67 7.79 -10.99 -0.09 0.58 16 10 O -0.53 -3.09 15.70 5.55 0.09 -3.01 16 11 N -0.73 1.03 5.08 -53.80 -0.27 0.75 16 12 C 0.14 -0.09 2.45 -67.93 -0.17 -0.25 16 13 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 14 C -0.12 0.31 5.39 -26.73 -0.14 0.16 16 15 C -0.11 0.15 5.57 -26.73 -0.15 0.00 16 16 C 0.08 -0.01 2.40 -26.73 -0.06 -0.07 16 17 H 0.08 -0.01 7.20 -51.93 -0.37 -0.38 16 18 O -0.38 -0.24 10.29 -35.23 -0.36 -0.60 16 19 C 0.40 -0.26 6.26 101.05 0.63 0.38 16 20 F -0.21 -0.21 16.63 2.25 0.04 -0.17 16 21 F -0.21 -0.24 15.46 2.25 0.03 -0.21 16 22 C -0.14 -0.05 5.39 -26.70 -0.14 -0.20 16 23 C -0.13 0.00 5.50 -26.71 -0.15 -0.15 16 24 C -0.10 -0.30 9.70 -39.58 -0.38 -0.69 16 25 C -0.12 -0.49 8.67 -39.58 -0.34 -0.83 16 26 H 0.38 -1.56 8.74 45.56 0.40 -1.16 16 27 H 0.07 -0.01 7.96 -51.93 -0.41 -0.43 16 28 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 29 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 30 H 0.13 0.27 8.06 -52.49 -0.42 -0.15 16 31 H 0.12 0.08 8.06 -52.48 -0.42 -0.34 16 32 H 0.11 -0.33 8.09 -51.93 -0.42 -0.75 16 33 H 0.10 -0.31 8.09 -51.93 -0.42 -0.73 16 34 H 0.40 -1.72 8.60 -40.82 -0.35 -2.07 16 35 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 36 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.17 -0.74 8.14 -51.93 -0.42 -1.16 16 40 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 41 H 0.08 0.09 6.50 -51.93 -0.34 -0.25 16 42 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 43 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 44 H 0.12 0.15 8.06 -52.49 -0.42 -0.27 16 45 H 0.12 0.39 4.88 -52.49 -0.26 0.13 16 LS Contribution 373.74 15.07 5.63 5.63 Total: 0.00 -9.87 373.74 -9.62 -19.50 By element: Atomic # 1 Polarization: -5.55 SS G_CDS: -6.42 Total: -11.97 kcal Atomic # 6 Polarization: -1.06 SS G_CDS: -2.85 Total: -3.91 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -0.27 Total: 0.75 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -0.72 Total: -4.63 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.07 Total: -0.38 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.06 Total: -5.00 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -9.87 -9.62 -19.50 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -188.518 kcal (2) G-P(sol) polarization free energy of solvation -9.875 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.500 kcal (6) G-S(sol) free energy of system = (1) + (5) -208.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds