Wall clock time and date at job start Sun Mar 7 2021 05:45:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86294 * 109.47447 * 2 1 4 4 C 1.50702 * 109.47024 * 239.99316 * 2 1 3 5 5 C 1.38234 * 120.00257 * 300.00864 * 4 2 1 6 6 C 1.38238 * 119.99675 * 180.25732 * 5 4 2 7 7 C 1.38228 * 120.00114 * 359.50218 * 6 5 4 8 8 C 1.50698 * 120.00195 * 180.26174 * 7 6 5 9 9 C 1.50704 * 109.47149 * 270.21448 * 8 7 6 10 10 O 1.21289 * 119.99520 * 359.97438 * 9 8 7 11 11 N 1.34770 * 120.00479 * 179.97438 * 9 8 7 12 12 C 1.46496 * 120.00263 * 179.97438 * 11 9 8 13 13 H 1.09005 * 109.47348 * 35.00696 * 12 11 9 14 14 C 1.53006 * 109.47191 * 155.00329 * 12 11 9 15 15 C 1.53000 * 109.47220 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.46918 * 299.99714 * 15 14 12 17 17 H 1.08999 * 109.47555 * 300.00363 * 16 15 14 18 18 O 1.42905 * 109.47180 * 179.97438 * 16 15 14 19 19 C 1.42897 * 114.00114 * 149.99941 * 18 16 15 20 20 F 1.39901 * 109.47246 * 300.00906 * 19 18 16 21 21 F 1.39900 * 109.46949 * 60.00150 * 19 18 16 22 22 C 1.53006 * 109.47080 * 60.00485 * 16 15 14 23 23 C 1.52995 * 109.47692 * 275.00619 * 12 11 9 24 24 C 1.38234 * 120.00051 * 0.47390 * 7 6 5 25 25 C 1.38235 * 119.99522 * 119.97877 * 4 2 1 26 26 H 0.96703 * 113.99392 * 300.00469 * 1 2 3 27 27 H 1.09007 * 109.47102 * 119.99865 * 2 1 3 28 28 H 1.48508 * 110.00053 * 178.68094 * 3 2 1 29 29 H 1.48502 * 109.99983 * 299.99633 * 3 2 1 30 30 H 1.08002 * 119.99744 * 359.97115 * 5 4 2 31 31 H 1.08004 * 119.99577 * 179.72816 * 6 5 4 32 32 H 1.08999 * 109.47413 * 30.20823 * 8 7 6 33 33 H 1.08995 * 109.47567 * 150.21591 * 8 7 6 34 34 H 0.96998 * 120.00028 * 0.02562 * 11 9 8 35 35 H 1.09000 * 109.46621 * 300.00473 * 14 12 11 36 36 H 1.08991 * 109.46881 * 60.00048 * 14 12 11 37 37 H 1.09002 * 109.47087 * 59.99745 * 15 14 12 38 38 H 1.08997 * 109.47282 * 179.97438 * 15 14 12 39 39 H 1.08994 * 109.47343 * 180.02562 * 19 18 16 40 40 H 1.08999 * 109.47026 * 59.99555 * 22 16 15 41 41 H 1.08997 * 109.46833 * 180.02562 * 22 16 15 42 42 H 1.09002 * 109.46797 * 299.99651 * 23 12 11 43 43 H 1.08997 * 109.47114 * 59.99495 * 23 12 11 44 44 H 1.08001 * 120.00294 * 179.78842 * 24 7 6 45 45 H 1.07996 * 120.00471 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7106 -1.2304 5 6 1.5972 -2.0340 -1.4491 6 6 2.0625 -2.6872 -2.5751 7 6 2.8532 -2.0141 -3.4875 8 6 3.3555 -2.7245 -4.7179 9 6 4.6832 -3.3711 -4.4178 10 8 5.1735 -3.2651 -3.3135 11 7 5.3258 -4.0673 -5.3764 12 6 6.6168 -4.6953 -5.0848 13 1 6.6243 -5.0488 -4.0536 14 6 6.8338 -5.8781 -6.0308 15 6 8.1818 -6.5345 -5.7258 16 6 9.3029 -5.5120 -5.9223 17 1 9.2958 -5.1586 -6.9533 18 8 10.5619 -6.1249 -5.6368 19 6 11.6548 -5.5810 -6.3797 20 9 11.4162 -5.7456 -7.7483 21 9 11.7837 -4.2185 -6.0895 22 6 9.0860 -4.3293 -4.9762 23 6 7.7376 -3.6727 -5.2814 24 6 3.1868 -0.6906 -3.2690 25 6 2.7257 -0.0387 -2.1406 26 1 -0.3932 0.4418 0.7651 27 1 1.7923 -0.5138 0.8900 28 1 3.5347 1.7701 0.0321 29 1 1.5617 2.4678 -1.2086 30 1 0.9766 -2.5589 -0.7380 31 1 1.8050 -3.7225 -2.7438 32 1 2.6377 -3.4894 -5.0144 33 1 3.4763 -2.0060 -5.5285 34 1 4.9339 -4.1518 -6.2596 35 1 6.0352 -6.6067 -5.8906 36 1 6.8263 -5.5248 -7.0618 37 1 8.1888 -6.8879 -4.6947 38 1 8.3362 -7.3774 -6.3995 39 1 12.5737 -6.0996 -6.1064 40 1 9.0930 -4.6827 -3.9451 41 1 9.8844 -3.6007 -5.1164 42 1 7.7302 -3.3194 -6.3126 43 1 7.5830 -2.8301 -4.6075 44 1 3.8075 -0.1656 -3.9801 45 1 2.9866 0.9953 -1.9698 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:45:30 Heat of formation + Delta-G solvation = -208.652471 kcal Electronic energy + Delta-G solvation = -29542.246187 eV Core-core repulsion = 24967.878144 eV Total energy + Delta-G solvation = -4574.368043 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.148 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -50.10701 -48.22033 -41.43702 -40.57807 -39.75716 -37.86075 -37.51769 -34.85104 -34.19223 -32.10588 -31.97928 -30.73386 -29.18003 -26.47549 -25.63256 -24.01489 -23.97480 -23.36763 -22.06986 -21.53103 -21.07481 -19.41609 -18.85545 -18.68236 -18.40760 -18.11514 -17.85045 -17.24265 -16.98064 -16.45264 -16.32108 -16.02294 -15.70535 -15.35593 -15.22405 -15.06238 -14.97293 -14.80389 -14.63876 -14.48676 -14.43599 -14.26385 -13.90267 -13.75333 -13.65773 -13.44435 -13.29257 -13.14924 -12.98629 -12.79155 -12.46659 -12.35525 -12.27580 -12.09818 -12.02675 -11.89132 -11.57483 -11.15230 -10.99636 -10.38077 -10.13243 -10.03951 -9.69518 -5.00159 0.09714 0.28776 1.26014 1.58378 1.59168 1.92337 1.92912 2.12824 2.63873 2.70336 3.37698 3.45118 3.48917 3.54719 3.67940 3.69573 3.77429 3.79879 3.88274 3.92696 3.95669 3.99835 4.04720 4.12645 4.22576 4.26485 4.31178 4.33657 4.43717 4.50973 4.52239 4.58750 4.64740 4.78829 4.88829 4.93086 4.93938 5.00395 5.02444 5.12490 5.17921 5.21767 5.39025 5.43990 5.45633 5.56801 5.86966 6.51908 6.87457 7.23171 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.079 4.079 3 Si 0.778 3.222 4 C -0.097 4.097 5 C -0.103 4.103 6 C -0.110 4.110 7 C -0.071 4.071 8 C -0.097 4.097 9 C 0.513 3.487 10 O -0.579 6.579 11 N -0.714 5.714 12 C 0.145 3.855 13 H 0.066 0.934 14 C -0.113 4.113 15 C -0.109 4.109 16 C 0.076 3.924 17 H 0.077 0.923 18 O -0.389 6.389 19 C 0.398 3.602 20 F -0.218 7.218 21 F -0.220 7.220 22 C -0.138 4.138 23 C -0.120 4.120 24 C -0.112 4.112 25 C -0.147 4.147 26 H 0.403 0.597 27 H 0.090 0.910 28 H -0.296 1.296 29 H -0.295 1.295 30 H 0.136 0.864 31 H 0.143 0.857 32 H 0.136 0.864 33 H 0.130 0.870 34 H 0.419 0.581 35 H 0.092 0.908 36 H 0.090 0.910 37 H 0.071 0.929 38 H 0.089 0.911 39 H 0.207 0.793 40 H 0.065 0.935 41 H 0.069 0.931 42 H 0.078 0.922 43 H 0.050 0.950 44 H 0.136 0.864 45 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.930 -2.026 -2.235 3.581 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.189 4.189 3 Si 0.685 3.315 4 C -0.097 4.097 5 C -0.121 4.121 6 C -0.128 4.128 7 C -0.071 4.071 8 C -0.136 4.136 9 C 0.301 3.699 10 O -0.458 6.458 11 N -0.366 5.366 12 C 0.040 3.960 13 H 0.084 0.916 14 C -0.151 4.151 15 C -0.147 4.147 16 C 0.020 3.980 17 H 0.095 0.905 18 O -0.311 6.311 19 C 0.307 3.693 20 F -0.200 7.200 21 F -0.202 7.202 22 C -0.176 4.176 23 C -0.158 4.158 24 C -0.130 4.130 25 C -0.165 4.165 26 H 0.254 0.746 27 H 0.108 0.892 28 H -0.224 1.224 29 H -0.223 1.223 30 H 0.154 0.846 31 H 0.161 0.839 32 H 0.154 0.846 33 H 0.148 0.852 34 H 0.256 0.744 35 H 0.111 0.889 36 H 0.109 0.891 37 H 0.090 0.910 38 H 0.107 0.893 39 H 0.223 0.777 40 H 0.083 0.917 41 H 0.087 0.913 42 H 0.097 0.903 43 H 0.069 0.931 44 H 0.153 0.847 45 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -1.023 -1.800 -2.311 3.103 hybrid contribution 0.223 0.046 -0.593 0.636 sum -0.800 -1.753 -2.905 3.486 Atomic orbital electron populations 1.86431 1.16981 1.82396 1.51347 1.24820 0.86002 1.10945 0.97151 0.94560 0.76875 0.75448 0.84605 1.19729 0.98484 0.95259 0.96197 1.21178 0.98983 0.93841 0.98070 1.21359 0.97184 1.00490 0.93784 1.19593 0.97196 0.93594 0.96730 1.20761 0.94103 1.01964 0.96807 1.20978 0.86869 0.77969 0.84088 1.90750 1.69099 1.61196 1.24799 1.45929 1.21502 1.53608 1.15572 1.20948 0.82221 0.92764 1.00082 0.91568 1.21720 0.97120 0.96351 0.99930 1.21521 0.91831 0.97584 1.03739 1.22452 0.82681 0.93810 0.99079 0.90455 1.88439 1.17469 1.60716 1.64492 1.23854 0.94428 0.77384 0.73672 1.93043 1.95569 1.95224 1.36209 1.93040 1.96267 1.37918 1.92981 1.22070 0.97885 0.97401 1.00286 1.21795 0.93513 0.98162 1.02380 1.21138 0.99384 0.95123 0.97379 1.20974 1.00558 0.99018 0.95913 0.74554 0.89219 1.22360 1.22269 0.84628 0.83905 0.84644 0.85202 0.74351 0.88898 0.89126 0.91025 0.89285 0.77718 0.91668 0.91276 0.90295 0.93143 0.84662 0.87011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.19 12.74 -148.98 -1.90 -3.09 16 2 C -0.08 -0.25 2.81 71.24 0.20 -0.05 16 3 Si 0.78 1.03 29.79 68.60 2.04 3.07 16 4 C -0.10 -0.87 5.42 -19.87 -0.11 -0.98 16 5 C -0.10 -0.79 9.61 22.27 0.21 -0.57 16 6 C -0.11 -0.61 9.70 22.27 0.22 -0.40 16 7 C -0.07 -0.34 4.37 -19.87 -0.09 -0.43 16 8 C -0.10 0.29 5.83 29.10 0.17 0.46 16 9 C 0.51 1.30 7.79 87.66 0.68 1.98 16 10 O -0.58 -7.73 15.70 -3.06 -0.05 -7.77 16 11 N -0.71 2.58 5.08 -442.53 -2.25 0.34 16 12 C 0.14 -0.15 2.45 44.99 0.11 -0.04 16 13 H 0.07 0.31 7.58 -2.38 -0.02 0.30 16 14 C -0.11 0.70 5.39 30.60 0.16 0.87 16 15 C -0.11 0.35 5.57 30.59 0.17 0.52 16 16 C 0.08 -0.01 2.40 30.60 0.07 0.07 16 17 H 0.08 -0.04 7.20 -2.39 -0.02 -0.06 16 18 O -0.39 -0.52 10.29 -148.98 -1.53 -2.05 16 19 C 0.40 -0.61 6.26 113.37 0.71 0.10 16 20 F -0.22 -0.37 16.63 44.97 0.75 0.38 16 21 F -0.22 -0.61 15.46 44.97 0.70 0.08 16 22 C -0.14 -0.29 5.39 30.61 0.17 -0.12 16 23 C -0.12 -0.12 5.50 30.61 0.17 0.05 16 24 C -0.11 -0.84 9.70 22.27 0.22 -0.62 16 25 C -0.15 -1.46 8.67 22.27 0.19 -1.26 16 26 H 0.40 -3.54 8.74 -74.05 -0.65 -4.19 16 27 H 0.09 -0.03 7.96 -2.38 -0.02 -0.05 16 28 H -0.30 -2.28 7.11 99.48 0.71 -1.57 16 29 H -0.29 -2.46 7.11 99.48 0.71 -1.75 16 30 H 0.14 0.67 8.06 -2.91 -0.02 0.64 16 31 H 0.14 0.11 8.06 -2.91 -0.02 0.08 16 32 H 0.14 -1.19 8.09 -2.39 -0.02 -1.21 16 33 H 0.13 -1.03 8.09 -2.39 -0.02 -1.05 16 34 H 0.42 -4.51 8.60 -92.71 -0.80 -5.31 16 35 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 36 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 37 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 38 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.21 -2.05 8.14 -2.39 -0.02 -2.07 16 40 H 0.06 0.28 8.14 -2.39 -0.02 0.27 16 41 H 0.07 0.27 6.50 -2.39 -0.02 0.26 16 42 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 43 H 0.05 0.31 8.14 -2.39 -0.02 0.30 16 44 H 0.14 0.48 8.06 -2.91 -0.02 0.46 16 45 H 0.11 1.04 4.88 -2.91 -0.01 1.02 16 Total: 0.00 -26.34 373.74 0.64 -25.70 By element: Atomic # 1 Polarization: -15.85 SS G_CDS: -0.38 Total: -16.23 kcal Atomic # 6 Polarization: -3.69 SS G_CDS: 3.26 Total: -0.43 kcal Atomic # 7 Polarization: 2.58 SS G_CDS: -2.25 Total: 0.34 kcal Atomic # 8 Polarization: -9.43 SS G_CDS: -3.48 Total: -12.91 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 1.44 Total: 0.46 kcal Atomic # 14 Polarization: 1.03 SS G_CDS: 2.04 Total: 3.07 kcal Total: -26.34 0.64 -25.70 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -182.956 kcal (2) G-P(sol) polarization free energy of solvation -26.337 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -209.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.641 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -208.652 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds