Wall clock time and date at job start Sun Mar 7 2021 05:46:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86306 * 109.47139 * 2 1 4 4 C 1.50697 * 109.47157 * 239.99951 * 2 1 3 5 5 C 1.38399 * 119.82769 * 299.99977 * 4 2 1 6 6 C 1.37895 * 120.17214 * 179.97438 * 5 4 2 7 7 C 1.39836 * 119.82351 * 0.02562 * 6 5 4 8 8 C 1.47207 * 120.16516 * 179.97438 * 7 6 5 9 9 C 1.34814 * 119.99849 * 179.97438 * 8 7 6 10 10 C 1.46427 * 119.99845 * 180.02562 * 9 8 7 11 11 O 1.21700 * 120.00374 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99696 * 180.02562 * 10 9 8 13 13 C 1.46505 * 119.99797 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47276 * 325.00066 * 13 12 10 15 15 C 1.53002 * 109.46958 * 84.99979 * 13 12 10 16 16 C 1.52997 * 109.46978 * 180.02562 * 15 13 12 17 17 C 1.53006 * 109.47164 * 299.99874 * 16 15 13 18 18 H 1.08998 * 109.46505 * 299.99708 * 17 16 15 19 19 O 1.42895 * 109.47000 * 180.02562 * 17 16 15 20 20 C 1.42905 * 114.00128 * 90.00194 * 19 17 16 21 21 F 1.39903 * 109.46764 * 299.99541 * 20 19 17 22 22 F 1.39897 * 109.47269 * 59.99344 * 20 19 17 23 23 C 1.52997 * 109.47127 * 59.99836 * 17 16 15 24 24 C 1.52996 * 109.46998 * 204.99519 * 13 12 10 25 25 C 1.39827 * 119.66370 * 0.25518 * 7 6 5 26 26 C 1.37893 * 119.82543 * 359.44770 * 25 7 6 27 27 H 0.96700 * 113.99437 * 60.00153 * 1 2 3 28 28 H 1.08998 * 109.47411 * 119.99761 * 2 1 3 29 29 H 1.48507 * 109.99855 * 298.67815 * 3 2 1 30 30 H 1.48498 * 110.00050 * 59.99783 * 3 2 1 31 31 H 1.08003 * 119.91442 * 359.97438 * 5 4 2 32 32 H 1.08000 * 120.08719 * 180.02562 * 6 5 4 33 33 H 1.07997 * 120.00571 * 0.02562 * 8 7 6 34 34 H 1.07997 * 119.99580 * 0.02562 * 9 8 7 35 35 H 0.97001 * 120.00457 * 359.97438 * 12 10 9 36 36 H 1.09002 * 109.47097 * 299.99818 * 15 13 12 37 37 H 1.09001 * 109.47142 * 59.99782 * 15 13 12 38 38 H 1.09001 * 109.47375 * 59.99908 * 16 15 13 39 39 H 1.09000 * 109.47140 * 179.97438 * 16 15 13 40 40 H 1.09005 * 109.46999 * 179.97438 * 20 19 17 41 41 H 1.09002 * 109.47153 * 180.02562 * 23 17 16 42 42 H 1.09001 * 109.46832 * 60.00321 * 23 17 16 43 43 H 1.09004 * 109.47368 * 60.00227 * 24 13 12 44 44 H 1.09001 * 109.47372 * 300.00383 * 24 13 12 45 45 H 1.07998 * 120.08626 * 179.72972 * 25 7 6 46 46 H 1.08003 * 119.91979 * 180.29784 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5948 -2.0355 -1.4459 6 6 2.0501 -2.6922 -2.5696 7 6 2.8543 -2.0161 -3.4924 8 6 3.3449 -2.7101 -4.6943 9 6 4.1196 -2.0548 -5.5820 10 6 4.6072 -2.7449 -6.7778 11 8 4.3136 -3.9102 -6.9702 12 7 5.3820 -2.0899 -7.6650 13 6 5.8704 -2.7806 -8.8612 14 1 6.0759 -3.8235 -8.6201 15 6 4.8077 -2.7110 -9.9598 16 6 5.3175 -3.4328 -11.2088 17 6 6.6017 -2.7603 -11.6981 18 1 6.3964 -1.7174 -11.9395 19 8 7.0774 -3.4341 -12.8649 20 6 6.5652 -2.9066 -14.0903 21 9 5.1699 -3.0086 -14.0947 22 9 6.9348 -1.5626 -14.2101 23 6 7.6643 -2.8299 -10.5995 24 6 7.1543 -2.1075 -9.3502 25 6 3.1948 -0.6791 -3.2647 26 6 2.7266 -0.0343 -2.1393 27 1 -0.3932 0.4417 -0.7651 28 1 1.7924 -0.5138 0.8900 29 1 1.5879 2.4586 -1.2243 30 1 1.5615 2.4680 1.2084 31 1 0.9740 -2.5564 -0.7320 32 1 1.7863 -3.7261 -2.7366 33 1 3.0837 -3.7439 -4.8655 34 1 4.3804 -1.0208 -5.4111 35 1 5.6164 -1.1613 -7.5116 36 1 3.8930 -3.1905 -9.6114 37 1 4.6022 -1.6680 -10.2009 38 1 5.5227 -4.4758 -10.9674 39 1 4.5603 -3.3836 -11.9913 40 1 6.9739 -3.4716 -14.9281 41 1 8.5791 -2.3504 -10.9479 42 1 7.8696 -3.8728 -10.3581 43 1 7.9114 -2.1570 -8.5676 44 1 6.9487 -1.0646 -9.5913 45 1 3.8190 -0.1516 -3.9707 46 1 2.9847 0.9998 -1.9644 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:46:10 Heat of formation + Delta-G solvation = -190.411881 kcal Electronic energy + Delta-G solvation = -30081.854704 eV Core-core repulsion = 25380.051492 eV Total energy + Delta-G solvation = -4701.803212 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.09034 -48.19088 -41.20079 -40.68386 -39.82575 -38.00662 -37.67648 -35.09990 -34.75232 -32.31760 -31.99680 -31.46626 -29.98448 -27.24856 -26.36582 -24.47253 -24.06083 -23.92705 -22.95302 -21.82927 -21.44454 -20.37543 -19.39556 -18.97035 -18.79296 -18.66647 -18.11547 -17.63484 -16.95326 -16.63589 -16.37889 -16.26507 -15.98929 -15.82131 -15.63542 -15.25234 -15.13032 -15.06317 -14.84921 -14.62939 -14.58647 -14.40208 -14.26851 -14.12360 -13.88758 -13.73814 -13.46360 -13.35988 -13.30144 -13.05197 -12.86560 -12.45698 -12.30533 -12.29449 -12.15199 -12.03031 -11.68051 -11.58898 -11.37603 -11.11652 -10.89245 -10.67205 -10.09303 -10.07166 -9.31549 -5.02958 -0.59782 0.29786 0.86927 1.21320 1.52881 1.86609 1.90445 2.15802 2.27775 2.64884 2.74371 3.28087 3.40949 3.43974 3.48446 3.57721 3.59443 3.70999 3.75208 3.80539 3.91419 3.94259 4.03223 4.06371 4.08809 4.14332 4.24309 4.27072 4.31116 4.37124 4.47354 4.50133 4.60442 4.75388 4.78600 4.87269 4.87933 4.97506 5.00382 5.05143 5.06016 5.14036 5.18835 5.30443 5.39061 5.47539 5.53921 5.55657 5.80249 6.32305 6.48928 7.24131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.078 4.078 3 Si 0.685 3.315 4 C -0.106 4.106 5 C -0.095 4.095 6 C -0.092 4.092 7 C -0.073 4.073 8 C -0.015 4.015 9 C -0.215 4.215 10 C 0.548 3.452 11 O -0.541 6.541 12 N -0.724 5.724 13 C 0.142 3.858 14 H 0.093 0.907 15 C -0.126 4.126 16 C -0.142 4.142 17 C 0.077 3.923 18 H 0.075 0.925 19 O -0.379 6.379 20 C 0.404 3.596 21 F -0.207 7.207 22 F -0.209 7.209 23 C -0.110 4.110 24 C -0.124 4.124 25 C -0.096 4.096 26 C -0.119 4.119 27 H 0.377 0.623 28 H 0.120 0.880 29 H -0.260 1.260 30 H -0.256 1.256 31 H 0.131 0.869 32 H 0.132 0.868 33 H 0.138 0.862 34 H 0.130 0.870 35 H 0.401 0.599 36 H 0.076 0.924 37 H 0.066 0.934 38 H 0.078 0.922 39 H 0.079 0.921 40 H 0.168 0.832 41 H 0.079 0.921 42 H 0.080 0.920 43 H 0.081 0.919 44 H 0.072 0.928 45 H 0.132 0.868 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.816 3.044 -0.071 4.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.187 4.187 3 Si 0.586 3.414 4 C -0.107 4.107 5 C -0.113 4.113 6 C -0.110 4.110 7 C -0.073 4.073 8 C -0.035 4.035 9 C -0.235 4.235 10 C 0.338 3.662 11 O -0.420 6.420 12 N -0.374 5.374 13 C 0.038 3.962 14 H 0.111 0.889 15 C -0.165 4.165 16 C -0.180 4.180 17 C 0.021 3.979 18 H 0.093 0.907 19 O -0.300 6.300 20 C 0.312 3.688 21 F -0.189 7.189 22 F -0.191 7.191 23 C -0.148 4.148 24 C -0.162 4.162 25 C -0.113 4.113 26 C -0.136 4.136 27 H 0.224 0.776 28 H 0.138 0.862 29 H -0.185 1.185 30 H -0.181 1.181 31 H 0.149 0.851 32 H 0.150 0.850 33 H 0.155 0.845 34 H 0.148 0.852 35 H 0.236 0.764 36 H 0.094 0.906 37 H 0.085 0.915 38 H 0.096 0.904 39 H 0.097 0.903 40 H 0.185 0.815 41 H 0.098 0.902 42 H 0.098 0.902 43 H 0.099 0.901 44 H 0.091 0.909 45 H 0.149 0.851 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.594 2.620 0.348 4.462 hybrid contribution -1.220 0.610 -0.592 1.487 sum 2.374 3.230 -0.243 4.016 Atomic orbital electron populations 1.86612 1.17573 1.79957 1.49352 1.25082 0.84083 1.11094 0.98487 0.95021 0.91667 0.74389 0.80346 1.20475 0.98347 0.95128 0.96704 1.20999 0.99014 0.93800 0.97454 1.21470 0.96058 1.00113 0.93381 1.19072 0.99191 0.93967 0.95054 1.22415 0.91209 0.99615 0.90263 1.22898 1.03555 1.01120 0.95958 1.18343 0.78245 0.86449 0.83180 1.90841 1.57507 1.16639 1.77027 1.45930 1.52604 1.15736 1.23143 1.21053 0.92938 0.98144 0.84084 0.88887 1.21875 0.99223 1.01186 0.94214 1.22126 0.96728 1.00974 0.98161 1.22408 0.94715 0.96309 0.84494 0.90704 1.88443 1.69228 1.58267 1.14092 1.23209 0.75577 0.78593 0.91395 1.93067 1.33139 1.95920 1.96761 1.93065 1.91176 1.38717 1.96097 1.21520 0.97753 1.02647 0.92913 1.21783 0.96776 1.00019 0.97580 1.21350 0.99047 0.93738 0.97214 1.20954 0.98411 0.99725 0.94517 0.77584 0.86182 1.18471 1.18133 0.85140 0.85043 0.84460 0.85183 0.76424 0.90568 0.91525 0.90375 0.90276 0.81540 0.90186 0.90176 0.90075 0.90901 0.85057 0.85215 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.40 12.76 -35.23 -0.45 -0.85 16 2 C -0.08 0.06 2.82 36.00 0.10 0.17 16 3 Si 0.68 -1.07 29.77 -169.99 -5.06 -6.13 16 4 C -0.11 0.06 5.40 -104.50 -0.56 -0.50 16 5 C -0.09 0.01 9.59 -39.65 -0.38 -0.37 16 6 C -0.09 0.02 9.80 -39.11 -0.38 -0.36 16 7 C -0.07 0.02 5.87 -105.06 -0.62 -0.60 16 8 C -0.02 0.00 9.46 -37.15 -0.35 -0.35 16 9 C -0.21 0.14 9.41 -37.50 -0.35 -0.21 16 10 C 0.55 0.83 7.71 -12.96 -0.10 0.73 16 11 O -0.54 -3.03 15.89 5.19 0.08 -2.94 16 12 N -0.72 0.85 5.07 -55.20 -0.28 0.57 16 13 C 0.14 -0.09 2.45 -67.93 -0.17 -0.26 16 14 H 0.09 0.13 7.57 -51.93 -0.39 -0.27 16 15 C -0.13 0.01 5.49 -26.73 -0.15 -0.14 16 16 C -0.14 -0.02 5.39 -26.73 -0.14 -0.17 16 17 C 0.08 -0.02 2.40 -26.73 -0.06 -0.09 16 18 H 0.07 -0.02 7.20 -51.93 -0.37 -0.39 16 19 O -0.38 -0.18 10.29 -35.23 -0.36 -0.54 16 20 C 0.40 -0.31 6.26 101.05 0.63 0.33 16 21 F -0.21 -0.21 15.46 2.25 0.03 -0.18 16 22 F -0.21 -0.19 16.63 2.25 0.04 -0.15 16 23 C -0.11 0.17 5.58 -26.71 -0.15 0.02 16 24 C -0.12 0.32 5.39 -26.71 -0.14 0.17 16 25 C -0.10 0.12 9.41 -39.11 -0.37 -0.25 16 26 C -0.12 0.16 8.65 -39.65 -0.34 -0.19 16 27 H 0.38 -0.75 8.70 45.56 0.40 -0.35 16 28 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 29 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 30 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 31 H 0.13 -0.08 8.06 -52.48 -0.42 -0.51 16 32 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 33 H 0.14 0.11 7.52 -52.49 -0.39 -0.29 16 34 H 0.13 -0.45 6.07 -52.49 -0.32 -0.77 16 35 H 0.40 -1.61 8.58 -40.82 -0.35 -1.96 16 36 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 37 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 39 H 0.08 0.07 6.50 -51.93 -0.34 -0.27 16 40 H 0.17 -0.76 8.14 -51.93 -0.42 -1.18 16 41 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 44 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 45 H 0.13 -0.46 6.17 -52.49 -0.32 -0.78 16 46 H 0.13 -0.40 4.85 -52.48 -0.25 -0.66 16 LS Contribution 383.57 15.07 5.78 5.78 Total: 0.00 -8.53 383.57 -9.95 -18.47 By element: Atomic # 1 Polarization: -5.78 SS G_CDS: -6.19 Total: -11.97 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -3.54 Total: -2.06 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.28 Total: 0.57 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -0.73 Total: -4.34 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.07 Total: -0.33 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.06 Total: -6.13 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -8.53 -9.95 -18.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -171.937 kcal (2) G-P(sol) polarization free energy of solvation -8.527 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.947 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.475 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds