Wall clock time and date at job start Sun Mar 7 2021 05:46:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86302 * 109.46930 * 2 1 4 4 C 1.50698 * 109.47012 * 119.99830 * 2 1 3 5 5 C 1.38614 * 119.84315 * 195.02727 * 4 2 1 6 6 F 1.35101 * 119.91661 * 0.02562 * 5 4 2 7 7 C 1.38111 * 120.16530 * 179.76664 * 5 4 2 8 8 C 1.39618 * 119.85087 * 0.46061 * 7 5 4 9 9 C 1.47695 * 120.15824 * 179.79110 * 8 7 5 10 10 O 1.21567 * 120.00341 * 179.72221 * 9 8 7 11 11 N 1.34780 * 119.99735 * 359.72753 * 9 8 7 12 12 C 1.46492 * 120.00132 * 180.02562 * 11 9 8 13 13 H 1.09000 * 109.47152 * 34.99769 * 12 11 9 14 14 C 1.53006 * 109.47363 * 154.99846 * 12 11 9 15 15 C 1.52997 * 109.47164 * 179.97438 * 14 12 11 16 16 C 1.53002 * 109.47415 * 300.00027 * 15 14 12 17 17 H 1.08996 * 109.46550 * 300.00288 * 16 15 14 18 18 O 1.42898 * 109.47113 * 180.02562 * 16 15 14 19 19 C 1.42901 * 113.99877 * 150.00102 * 18 16 15 20 20 F 1.39904 * 109.46926 * 299.99679 * 19 18 16 21 21 F 1.39896 * 109.47418 * 59.99659 * 19 18 16 22 22 C 1.52996 * 109.46972 * 59.99860 * 16 15 14 23 23 C 1.52997 * 109.47165 * 300.00293 * 22 16 15 24 24 C 1.39843 * 119.69099 * 359.51851 * 8 7 5 25 25 F 1.35098 * 120.08697 * 180.22991 * 24 8 7 26 26 C 1.38234 * 119.84078 * 14.99958 * 4 2 1 27 27 H 0.96706 * 113.99427 * 60.00391 * 1 2 3 28 28 H 1.08998 * 109.47184 * 240.00023 * 2 1 3 29 29 H 1.48503 * 110.00058 * 298.67955 * 3 2 1 30 30 H 1.48500 * 109.99887 * 59.99780 * 3 2 1 31 31 H 1.08000 * 120.07567 * 180.25272 * 7 5 4 32 32 H 0.97006 * 119.99905 * 359.97438 * 11 9 8 33 33 H 1.09001 * 109.46998 * 299.99569 * 14 12 11 34 34 H 1.09000 * 109.47050 * 59.99860 * 14 12 11 35 35 H 1.09000 * 109.47140 * 60.00051 * 15 14 12 36 36 H 1.09001 * 109.47230 * 179.97438 * 15 14 12 37 37 H 1.08996 * 109.47130 * 179.97438 * 19 18 16 38 38 H 1.09000 * 109.47054 * 60.00300 * 22 16 15 39 39 H 1.09001 * 109.46997 * 180.02562 * 22 16 15 40 40 H 1.09000 * 109.47140 * 299.99954 * 23 22 16 41 41 H 1.09002 * 109.47045 * 180.02562 * 23 22 16 42 42 H 1.07991 * 119.92972 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.2561 -0.5720 1.6144 6 9 4.0919 0.1991 0.8850 7 6 3.7223 -1.2162 2.7436 8 6 2.8583 -2.0161 3.4939 9 6 3.3509 -2.7118 4.7001 10 8 2.5949 -3.4035 5.3542 11 7 4.6385 -2.5795 5.0757 12 6 5.1273 -3.2699 6.2717 13 1 4.6259 -4.2332 6.3656 14 6 6.6367 -3.4902 6.1525 15 6 7.1472 -4.2107 7.4019 16 6 6.8522 -3.3589 8.6382 17 1 7.3536 -2.3958 8.5438 18 8 7.3296 -4.0317 9.8051 19 6 7.7370 -3.1537 10.8563 20 9 8.7730 -2.3308 10.4014 21 9 6.6523 -2.3630 11.2504 22 6 5.3429 -3.1387 8.7574 23 6 4.8323 -2.4182 7.5080 24 6 1.5229 -2.1510 3.1014 25 9 0.6788 -2.9193 3.8242 26 6 1.0686 -1.4964 1.9713 27 1 -0.3933 0.4417 -0.7652 28 1 1.7924 -0.5138 -0.8900 29 1 1.5879 2.4586 -1.2243 30 1 1.5614 2.4679 1.2085 31 1 4.7537 -1.1041 3.0436 32 1 5.2418 -2.0278 4.5535 33 1 6.8469 -4.0967 5.2715 34 1 7.1381 -2.5269 6.0586 35 1 6.6458 -5.1739 7.4962 36 1 8.2225 -4.3680 7.3168 37 1 8.0855 -3.7411 11.7057 38 1 4.8415 -4.1020 8.8517 39 1 5.1327 -2.5316 9.6379 40 1 5.3337 -1.4550 7.4137 41 1 3.7571 -2.2609 7.5931 42 1 0.0376 -1.5991 1.6670 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:46:13 Heat of formation + Delta-G solvation = -284.973413 kcal Electronic energy + Delta-G solvation = -32979.627484 eV Core-core repulsion = 27618.579584 eV Total energy + Delta-G solvation = -5361.047900 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.113 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -50.30407 -50.12219 -50.06522 -48.17870 -41.54292 -40.32993 -39.62000 -37.88089 -37.63683 -35.06150 -33.24872 -31.93594 -31.43454 -30.09203 -27.82575 -26.32196 -24.26102 -24.20449 -23.83975 -22.88915 -21.73385 -21.33602 -19.68224 -19.32865 -19.02772 -18.71133 -18.63960 -18.48703 -18.04410 -17.40425 -17.26692 -17.09378 -16.69755 -16.36046 -16.07213 -15.98869 -15.82281 -15.63541 -15.59935 -15.26266 -15.13796 -15.01751 -14.64528 -14.60020 -14.40694 -14.22079 -14.10236 -13.81798 -13.71010 -13.42882 -13.25010 -13.10658 -13.05082 -12.82407 -12.74622 -12.43810 -12.22911 -12.07096 -11.97751 -11.53436 -11.25125 -11.14240 -11.05942 -10.27259 -10.13389 -9.71554 -4.81255 -0.77746 -0.26749 1.09230 1.46114 1.57162 1.80301 1.90143 2.05699 2.29577 2.69720 2.73912 2.84455 2.94555 3.20964 3.45203 3.52944 3.54099 3.62475 3.72723 3.82312 3.88311 3.95978 4.00384 4.05882 4.15282 4.21309 4.29299 4.34084 4.38461 4.41102 4.50067 4.63621 4.69747 4.74748 4.82132 4.83942 4.98657 5.05348 5.07296 5.12981 5.21058 5.36838 5.41800 5.61839 6.34420 6.48672 7.02303 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.085 4.085 3 Si 0.744 3.256 4 C -0.057 4.057 5 C 0.085 3.915 6 F -0.088 7.088 7 C -0.063 4.063 8 C -0.159 4.159 9 C 0.559 3.441 10 O -0.565 6.565 11 N -0.700 5.700 12 C 0.144 3.856 13 H 0.072 0.928 14 C -0.114 4.114 15 C -0.108 4.108 16 C 0.075 3.925 17 H 0.079 0.921 18 O -0.389 6.389 19 C 0.398 3.602 20 F -0.218 7.218 21 F -0.220 7.220 22 C -0.138 4.138 23 C -0.122 4.122 24 C 0.131 3.869 25 F -0.131 7.131 26 C -0.121 4.121 27 H 0.404 0.596 28 H 0.121 0.879 29 H -0.270 1.270 30 H -0.302 1.302 31 H 0.195 0.805 32 H 0.419 0.581 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.071 0.929 36 H 0.090 0.910 37 H 0.205 0.795 38 H 0.065 0.935 39 H 0.069 0.931 40 H 0.082 0.918 41 H 0.051 0.949 42 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.746 2.092 -4.715 9.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.193 4.193 3 Si 0.647 3.353 4 C -0.058 4.058 5 C 0.066 3.934 6 F -0.067 7.067 7 C -0.082 4.082 8 C -0.163 4.163 9 C 0.346 3.654 10 O -0.444 6.444 11 N -0.353 5.353 12 C 0.040 3.960 13 H 0.090 0.910 14 C -0.152 4.152 15 C -0.146 4.146 16 C 0.019 3.981 17 H 0.097 0.903 18 O -0.311 6.311 19 C 0.307 3.693 20 F -0.200 7.200 21 F -0.202 7.202 22 C -0.176 4.176 23 C -0.160 4.160 24 C 0.110 3.890 25 F -0.109 7.109 26 C -0.140 4.140 27 H 0.255 0.745 28 H 0.138 0.862 29 H -0.196 1.196 30 H -0.229 1.229 31 H 0.212 0.788 32 H 0.258 0.742 33 H 0.114 0.886 34 H 0.113 0.887 35 H 0.090 0.910 36 H 0.109 0.891 37 H 0.222 0.778 38 H 0.084 0.916 39 H 0.088 0.912 40 H 0.101 0.899 41 H 0.070 0.930 42 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 7.117 1.955 -3.703 8.258 hybrid contribution -1.674 0.362 -0.391 1.757 sum 5.443 2.317 -4.094 7.195 Atomic orbital electron populations 1.86441 1.17397 1.81109 1.51617 1.24821 0.85303 1.11457 0.97710 0.94066 0.91690 0.71732 0.77775 1.19603 0.92260 0.96822 0.97163 1.16979 0.87008 0.96483 0.92962 1.91239 1.69021 1.70893 1.75527 1.21351 1.01838 0.93321 0.91714 1.19809 0.93158 1.04338 0.99005 1.18076 0.82937 0.80543 0.83824 1.90870 1.56740 1.40972 1.55810 1.45752 1.09737 1.50976 1.28831 1.21074 0.95848 0.95664 0.83413 0.91014 1.21745 0.91846 1.03153 0.98434 1.21517 1.03089 0.98876 0.91150 1.22473 0.93817 0.96935 0.84911 0.90293 1.88441 1.82281 1.34285 1.26092 1.23835 0.73930 0.80328 0.91236 1.93044 1.59976 1.76191 1.90803 1.93040 1.58124 1.77858 1.91193 1.22059 0.95407 1.01603 0.98569 1.21809 1.01007 0.99651 0.93583 1.18024 0.87370 0.92317 0.91274 1.91574 1.70134 1.72616 1.76617 1.20792 1.02475 0.97306 0.93416 0.74466 0.86195 1.19606 1.22903 0.78794 0.74210 0.88561 0.88675 0.90988 0.89133 0.77847 0.91575 0.91241 0.89925 0.93049 0.82639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.90 11.47 -148.98 -1.71 -0.81 16 2 C -0.09 0.32 2.95 71.24 0.21 0.53 16 3 Si 0.74 -2.27 29.56 68.60 2.03 -0.24 16 4 C -0.06 0.05 5.16 -19.78 -0.10 -0.05 16 5 C 0.09 -0.40 6.65 22.33 0.15 -0.25 16 6 F -0.09 0.70 13.69 44.97 0.62 1.31 16 7 C -0.06 0.39 9.52 22.57 0.21 0.60 16 8 C -0.16 -0.29 5.88 -20.06 -0.12 -0.41 16 9 C 0.56 2.75 7.73 86.74 0.67 3.42 16 10 O -0.56 -8.51 15.00 -3.93 -0.06 -8.57 16 11 N -0.70 2.44 5.03 -445.56 -2.24 0.20 16 12 C 0.14 -0.29 2.46 44.99 0.11 -0.18 16 13 H 0.07 0.25 7.58 -2.39 -0.02 0.23 16 14 C -0.11 0.89 5.39 30.60 0.16 1.06 16 15 C -0.11 0.50 5.57 30.59 0.17 0.67 16 16 C 0.08 -0.09 2.40 30.59 0.07 -0.02 16 17 H 0.08 -0.15 7.20 -2.39 -0.02 -0.17 16 18 O -0.39 -0.18 10.29 -148.98 -1.53 -1.71 16 19 C 0.40 -0.87 6.26 113.37 0.71 -0.16 16 20 F -0.22 -0.20 16.63 44.97 0.75 0.55 16 21 F -0.22 -0.48 15.46 44.97 0.70 0.21 16 22 C -0.14 -0.15 5.39 30.59 0.17 0.02 16 23 C -0.12 0.00 5.49 30.59 0.17 0.16 16 24 C 0.13 0.85 7.28 22.67 0.17 1.02 16 25 F -0.13 -1.75 15.55 44.97 0.70 -1.05 16 26 C -0.12 -0.39 9.33 22.28 0.21 -0.18 16 27 H 0.40 -3.83 8.74 -74.05 -0.65 -4.48 16 28 H 0.12 -1.04 7.96 -2.39 -0.02 -1.06 16 29 H -0.27 -0.03 7.11 99.48 0.71 0.68 16 30 H -0.30 -1.72 7.11 99.48 0.71 -1.01 16 31 H 0.20 -2.92 6.40 -2.91 -0.02 -2.93 16 32 H 0.42 -4.84 6.63 -92.70 -0.62 -5.45 16 33 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 34 H 0.09 -1.08 8.14 -2.39 -0.02 -1.10 16 35 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 36 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 37 H 0.21 -2.13 8.14 -2.39 -0.02 -2.15 16 38 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 39 H 0.07 0.21 6.50 -2.39 -0.02 0.20 16 40 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 41 H 0.05 0.29 8.14 -2.39 -0.02 0.27 16 42 H 0.16 0.58 7.12 -2.91 -0.02 0.56 16 Total: 0.00 -24.19 357.63 2.09 -22.10 By element: Atomic # 1 Polarization: -18.10 SS G_CDS: -0.11 Total: -18.22 kcal Atomic # 6 Polarization: 3.26 SS G_CDS: 2.96 Total: 6.22 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -2.24 Total: 0.20 kcal Atomic # 8 Polarization: -7.80 SS G_CDS: -3.30 Total: -11.10 kcal Atomic # 9 Polarization: -1.73 SS G_CDS: 2.76 Total: 1.02 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: 2.03 Total: -0.24 kcal Total: -24.19 2.09 -22.10 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -262.872 kcal (2) G-P(sol) polarization free energy of solvation -24.193 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -287.065 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.101 kcal (6) G-S(sol) free energy of system = (1) + (5) -284.973 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds