Wall clock time and date at job start Sun Mar 7 2021 05:47:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46981 * 2 1 4 4 C 1.50697 * 109.47215 * 239.99927 * 2 1 3 5 5 C 1.34190 * 126.53886 * 105.00065 * 4 2 1 6 6 N 1.36872 * 109.96516 * 179.97438 * 5 4 2 7 7 C 1.37394 * 109.98243 * 0.02562 * 6 5 4 8 8 C 1.39323 * 133.25522 * 180.02562 * 7 6 5 9 9 C 1.36357 * 120.24375 * 179.78805 * 8 7 6 10 10 C 1.40174 * 120.66217 * 0.44508 * 9 8 7 11 11 C 1.47653 * 119.97219 * 179.79198 * 10 9 8 12 12 O 1.21576 * 120.00046 * 179.72479 * 11 10 9 13 13 N 1.34778 * 119.99850 * 359.72604 * 11 10 9 14 14 C 1.46496 * 120.00072 * 179.97438 * 13 11 10 15 15 H 1.09002 * 109.47021 * 34.99856 * 14 13 11 16 16 C 1.53005 * 109.47414 * 154.99744 * 14 13 11 17 17 C 1.52997 * 109.47452 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.46817 * 300.00239 * 17 16 14 19 19 H 1.08992 * 109.47063 * 299.99823 * 18 17 16 20 20 O 1.42903 * 109.46923 * 179.97438 * 18 17 16 21 21 C 1.42903 * 113.99767 * 89.99668 * 20 18 17 22 22 F 1.39898 * 109.47418 * 300.00427 * 21 20 18 23 23 F 1.39902 * 109.46966 * 60.00157 * 21 20 18 24 24 C 1.53000 * 109.47233 * 60.00194 * 18 17 16 25 25 C 1.52997 * 109.47060 * 299.99657 * 24 18 17 26 26 C 1.39192 * 120.05312 * 359.51657 * 10 9 8 27 27 C 1.39223 * 119.39239 * 0.25636 * 26 10 9 28 28 H 0.96697 * 113.99624 * 300.00065 * 1 2 3 29 29 H 1.09001 * 109.47440 * 119.99729 * 2 1 3 30 30 H 1.48498 * 110.00136 * 178.67929 * 3 2 1 31 31 H 1.48503 * 109.99958 * 299.99994 * 3 2 1 32 32 H 1.07999 * 125.01792 * 0.02562 * 5 4 2 33 33 H 0.96997 * 125.00581 * 179.97438 * 6 5 4 34 34 H 1.08002 * 119.88218 * 359.97299 * 8 7 6 35 35 H 1.07992 * 119.66852 * 180.24141 * 9 8 7 36 36 H 0.97007 * 120.00235 * 359.97438 * 13 11 10 37 37 H 1.09002 * 109.46935 * 60.00059 * 16 14 13 38 38 H 1.09001 * 109.46812 * 300.00401 * 16 14 13 39 39 H 1.08993 * 109.47194 * 179.97438 * 17 16 14 40 40 H 1.09002 * 109.46695 * 59.99734 * 17 16 14 41 41 H 1.09002 * 109.47086 * 180.02562 * 21 20 18 42 42 H 1.09002 * 109.47398 * 59.99826 * 24 18 17 43 43 H 1.09001 * 109.47194 * 180.02562 * 24 18 17 44 44 H 1.08996 * 109.47853 * 180.02562 * 25 24 18 45 45 H 1.09002 * 109.47153 * 300.00319 * 25 24 18 46 46 H 1.08003 * 120.30049 * 180.23341 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4608 -0.1386 -2.3229 6 7 2.8033 -1.1005 -3.2344 7 6 2.4957 -2.3455 -2.7412 8 6 2.6352 -3.6350 -3.2498 9 6 2.2348 -4.7107 -2.5136 10 6 1.6703 -4.5368 -1.2425 11 6 1.2378 -5.7121 -0.4603 12 8 0.7527 -5.5621 0.6443 13 7 1.3809 -6.9511 -0.9710 14 6 0.9523 -8.1173 -0.1948 15 1 0.0638 -7.8626 0.3830 16 6 0.6288 -9.2718 -1.1453 17 6 0.1806 -10.4896 -0.3347 18 6 1.3032 -10.9106 0.6159 19 1 2.1917 -11.1656 0.0385 20 8 0.8843 -12.0477 1.3735 21 6 1.1964 -13.3008 0.7616 22 9 0.5668 -13.3806 -0.4852 23 9 2.5812 -13.4049 0.5921 24 6 1.6265 -9.7561 1.5664 25 6 2.0747 -8.5384 0.7558 26 6 1.5223 -3.2574 -0.7146 27 6 1.9346 -2.1578 -1.4624 28 1 -0.3932 0.4417 0.7650 29 1 1.7924 -0.5138 0.8900 30 1 3.5345 1.7704 0.0322 31 1 1.5614 2.4679 -1.2085 32 1 2.5973 0.9236 -2.4620 33 1 3.2035 -0.9285 -4.1010 34 1 3.0648 -3.7835 -4.2296 35 1 2.3509 -5.7064 -2.9153 36 1 1.7676 -7.0708 -1.8525 37 1 1.5173 -9.5265 -1.7231 38 1 -0.1711 -8.9719 -1.8222 39 1 -0.0502 -11.3119 -1.0118 40 1 -0.7079 -10.2345 0.2428 41 1 0.8457 -14.1132 1.3980 42 1 0.7379 -9.5012 2.1439 43 1 2.4265 -10.0560 2.2434 44 1 2.3055 -7.7160 1.4329 45 1 2.9633 -8.7934 0.1783 46 1 1.0913 -3.1190 0.2660 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:47:04 Heat of formation + Delta-G solvation = -167.520042 kcal Electronic energy + Delta-G solvation = -32654.317871 eV Core-core repulsion = 27759.855272 eV Total energy + Delta-G solvation = -4894.462599 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.143 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -50.07251 -48.17302 -42.50168 -41.10511 -39.86687 -38.00972 -37.63404 -37.27012 -34.74969 -33.38332 -31.95443 -31.22488 -30.67529 -29.48381 -26.48936 -26.41495 -24.85077 -23.93526 -23.49556 -23.00971 -21.45241 -21.24361 -20.50381 -19.37594 -19.10310 -18.85498 -18.66387 -18.37248 -18.29068 -17.63903 -17.02370 -16.49107 -15.99325 -15.80627 -15.63334 -15.58261 -15.36120 -15.12935 -15.05643 -14.97979 -14.77959 -14.72608 -14.60782 -14.42178 -14.16489 -14.16117 -13.81609 -13.76560 -13.54140 -13.38757 -13.25059 -12.70631 -12.67828 -12.51365 -12.46895 -12.20732 -12.14152 -12.01687 -11.86088 -11.45310 -11.08247 -10.80401 -10.79158 -10.19636 -10.02459 -9.34107 -8.85225 -5.02630 -0.06050 0.17342 1.28361 1.40920 1.65195 1.90244 1.92386 1.94876 2.00408 2.19480 2.66898 2.96063 3.43314 3.51192 3.52670 3.55914 3.60716 3.66155 3.80249 3.83057 3.90644 3.95814 4.00326 4.05965 4.11837 4.18296 4.24470 4.28522 4.35903 4.36947 4.46660 4.52595 4.58400 4.66574 4.76872 4.84942 4.94306 5.00581 5.03761 5.08170 5.17927 5.20054 5.25040 5.36654 5.46341 5.56062 5.57685 5.59751 5.95803 6.32762 6.56576 6.74056 7.33526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.039 4.039 3 Si 0.687 3.313 4 C -0.144 4.144 5 C 0.056 3.944 6 N -0.584 5.584 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.567 3.433 12 O -0.536 6.536 13 N -0.726 5.726 14 C 0.143 3.857 15 H 0.094 0.906 16 C -0.124 4.124 17 C -0.140 4.140 18 C 0.077 3.923 19 H 0.075 0.925 20 O -0.378 6.378 21 C 0.403 3.597 22 F -0.208 7.208 23 F -0.208 7.208 24 C -0.111 4.111 25 C -0.127 4.127 26 C 0.010 3.990 27 C -0.102 4.102 28 H 0.380 0.620 29 H 0.072 0.928 30 H -0.256 1.256 31 H -0.253 1.253 32 H 0.170 0.830 33 H 0.422 0.578 34 H 0.128 0.872 35 H 0.129 0.871 36 H 0.399 0.601 37 H 0.070 0.930 38 H 0.078 0.922 39 H 0.081 0.919 40 H 0.079 0.921 41 H 0.168 0.832 42 H 0.079 0.921 43 H 0.077 0.923 44 H 0.079 0.921 45 H 0.067 0.933 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.862 1.561 -1.613 2.917 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.150 4.150 3 Si 0.588 3.412 4 C -0.151 4.151 5 C -0.071 4.071 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.173 4.173 11 C 0.355 3.645 12 O -0.413 6.413 13 N -0.378 5.378 14 C 0.039 3.961 15 H 0.112 0.888 16 C -0.162 4.162 17 C -0.179 4.179 18 C 0.021 3.979 19 H 0.093 0.907 20 O -0.300 6.300 21 C 0.312 3.688 22 F -0.190 7.190 23 F -0.190 7.190 24 C -0.149 4.149 25 C -0.165 4.165 26 C -0.009 4.009 27 C -0.106 4.106 28 H 0.228 0.772 29 H 0.090 0.910 30 H -0.180 1.180 31 H -0.178 1.178 32 H 0.187 0.813 33 H 0.259 0.741 34 H 0.146 0.854 35 H 0.147 0.853 36 H 0.234 0.766 37 H 0.089 0.911 38 H 0.097 0.903 39 H 0.099 0.901 40 H 0.098 0.902 41 H 0.184 0.816 42 H 0.098 0.902 43 H 0.095 0.905 44 H 0.098 0.902 45 H 0.086 0.914 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.068 2.028 -1.775 3.397 hybrid contribution 0.691 -0.562 -1.514 1.756 sum 2.759 1.466 -3.289 4.536 Atomic orbital electron populations 1.86535 1.17408 1.81816 1.49432 1.23999 0.85456 1.09356 0.96174 0.94982 0.80764 0.77607 0.87831 1.19641 1.07857 0.91343 0.96247 1.21582 1.01932 0.94063 0.89499 1.41686 1.54803 1.04143 1.18035 1.18435 0.99876 0.86477 0.94144 1.19663 1.05862 0.88737 1.01138 1.20590 0.96646 0.98311 0.93014 1.19549 1.08172 0.93273 0.96350 1.18153 0.77807 0.82827 0.85702 1.90791 1.44326 1.86047 1.20179 1.45941 1.65009 1.05591 1.21211 1.21046 0.98158 0.84327 0.92570 0.88811 1.21761 1.02414 0.94038 0.97991 1.22106 0.98962 0.98331 0.98470 1.22417 0.97187 0.85250 0.93058 0.90703 1.88457 1.80330 1.13760 1.47414 1.23213 0.74118 0.90785 0.80703 1.93059 1.82200 1.96434 1.47274 1.93068 1.33757 1.96200 1.96019 1.21538 1.03005 0.92680 0.97691 1.21899 0.98342 0.97661 0.98628 1.20670 0.92298 0.89113 0.98838 1.18903 1.04575 0.92748 0.94401 0.77238 0.90964 1.18025 1.17789 0.81331 0.74072 0.85382 0.85330 0.76566 0.91085 0.90339 0.90061 0.90247 0.81563 0.90243 0.90463 0.90212 0.91407 0.84290 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.70 12.86 -35.23 -0.45 -1.16 16 2 C -0.04 -0.03 3.05 36.00 0.11 0.08 16 3 Si 0.69 -0.92 30.79 -169.99 -5.23 -6.15 16 4 C -0.14 -0.41 5.61 -102.69 -0.58 -0.98 16 5 C 0.06 0.07 10.43 -16.73 -0.17 -0.11 16 6 N -0.58 -0.07 6.05 -10.61 -0.06 -0.13 16 7 C 0.12 0.23 7.27 -83.96 -0.61 -0.38 16 8 C -0.13 -0.03 10.00 -39.86 -0.40 -0.43 16 9 C -0.07 -0.01 9.46 -39.53 -0.37 -0.38 16 10 C -0.17 -0.45 5.87 -104.97 -0.62 -1.06 16 11 C 0.57 1.91 7.73 -12.42 -0.10 1.81 16 12 O -0.54 -3.72 15.99 5.30 0.08 -3.63 16 13 N -0.73 -0.12 5.03 -54.81 -0.28 -0.39 16 14 C 0.14 0.02 2.45 -67.93 -0.17 -0.15 16 15 H 0.09 0.20 7.58 -51.93 -0.39 -0.20 16 16 C -0.12 0.18 5.39 -26.73 -0.14 0.04 16 17 C -0.14 0.07 5.39 -26.73 -0.14 -0.07 16 18 C 0.08 0.01 2.40 -26.73 -0.06 -0.06 16 19 H 0.07 0.01 7.20 -51.93 -0.37 -0.36 16 20 O -0.38 -0.30 10.29 -35.23 -0.36 -0.66 16 21 C 0.40 -0.26 6.26 101.05 0.63 0.37 16 22 F -0.21 -0.16 15.46 2.25 0.03 -0.13 16 23 F -0.21 -0.24 16.63 2.25 0.04 -0.21 16 24 C -0.11 -0.01 5.57 -26.73 -0.15 -0.15 16 25 C -0.13 -0.01 5.50 -26.73 -0.15 -0.16 16 26 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 27 C -0.10 -0.38 6.34 -105.16 -0.67 -1.04 16 28 H 0.38 -1.45 8.74 45.56 0.40 -1.06 16 29 H 0.07 -0.01 7.96 -51.93 -0.41 -0.43 16 30 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 31 H -0.25 -0.27 7.04 56.52 0.40 0.13 16 32 H 0.17 -0.13 6.30 -52.49 -0.33 -0.46 16 33 H 0.42 -1.33 8.96 -40.82 -0.37 -1.70 16 34 H 0.13 -0.30 8.06 -52.49 -0.42 -0.73 16 35 H 0.13 -0.39 6.36 -52.49 -0.33 -0.73 16 36 H 0.40 -0.98 6.61 -40.82 -0.27 -1.25 16 37 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 39 H 0.08 -0.01 6.50 -51.93 -0.34 -0.35 16 40 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 41 H 0.17 -0.73 8.14 -51.93 -0.42 -1.15 16 42 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 43 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 44 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 45 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 46 H 0.14 0.62 7.64 -52.48 -0.40 0.22 16 LS Contribution 382.69 15.07 5.77 5.77 Total: 0.00 -10.51 382.69 -10.25 -20.76 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -5.83 Total: -11.07 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -3.96 Total: -3.00 kcal Atomic # 7 Polarization: -0.19 SS G_CDS: -0.34 Total: -0.53 kcal Atomic # 8 Polarization: -4.72 SS G_CDS: -0.73 Total: -5.45 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.07 Total: -0.33 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.23 Total: -6.15 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -10.51 -10.25 -20.76 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.759 kcal (2) G-P(sol) polarization free energy of solvation -10.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.267 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.253 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.761 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds