Wall clock time and date at job start Sun Mar 7 2021 05:47:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34663 * 124.85054 * 2 1 4 4 C 1.36767 * 108.39657 * 180.15206 * 3 2 1 5 5 C 1.47263 * 126.94308 * 179.83584 * 4 3 2 6 6 O 1.21623 * 120.00126 * 179.68585 * 5 4 3 7 7 N 1.34777 * 119.99630 * 359.68272 * 5 4 3 8 8 C 1.46499 * 119.99665 * 179.72408 * 7 5 4 9 9 H 1.08999 * 109.47228 * 325.27715 * 8 7 5 10 10 C 1.52999 * 109.47341 * 85.27876 * 8 7 5 11 11 C 1.52997 * 109.47188 * 180.02562 * 10 8 7 12 12 C 1.53003 * 109.46860 * 299.99296 * 11 10 8 13 13 H 1.08999 * 109.47459 * 300.00495 * 12 11 10 14 14 O 1.42902 * 109.46943 * 180.02562 * 12 11 10 15 15 C 1.42893 * 113.99949 * 90.00533 * 14 12 11 16 16 F 1.39899 * 109.47221 * 299.99992 * 15 14 12 17 17 F 1.39898 * 109.47219 * 59.99924 * 15 14 12 18 18 C 1.53003 * 109.46811 * 60.01012 * 12 11 10 19 19 C 1.53001 * 109.47193 * 205.27836 * 8 7 5 20 20 C 1.46693 * 106.11423 * 359.57576 * 4 3 2 21 21 C 1.34478 * 106.33310 * 0.26240 * 20 4 3 22 22 C 1.50704 * 125.57165 * 179.97438 * 21 20 4 23 23 O 1.42901 * 109.46882 * 210.02367 * 22 21 20 24 24 Si 1.86295 * 109.46832 * 330.02372 * 22 21 20 25 25 H 1.09000 * 109.47084 * 270.33439 * 1 2 3 26 26 H 1.08995 * 109.47271 * 30.33805 * 1 2 3 27 27 H 1.09001 * 109.47001 * 150.33715 * 1 2 3 28 28 H 1.08001 * 125.80273 * 0.02562 * 3 2 1 29 29 H 0.97001 * 120.00485 * 0.02562 * 7 5 4 30 30 H 1.09001 * 109.46823 * 300.00095 * 10 8 7 31 31 H 1.08999 * 109.47091 * 59.99755 * 10 8 7 32 32 H 1.09002 * 109.46693 * 180.02562 * 11 10 8 33 33 H 1.08993 * 109.47585 * 60.00233 * 11 10 8 34 34 H 1.09002 * 109.47110 * 179.97438 * 15 14 12 35 35 H 1.09000 * 109.47291 * 180.02562 * 18 12 11 36 36 H 1.08999 * 109.47531 * 59.99527 * 18 12 11 37 37 H 1.08999 * 109.46935 * 300.00059 * 19 8 7 38 38 H 1.09004 * 109.47138 * 59.99988 * 19 8 7 39 39 H 1.07996 * 126.82890 * 180.22737 * 20 4 3 40 40 H 1.09000 * 109.47149 * 90.02476 * 22 21 20 41 41 H 0.96700 * 114.00189 * 59.99757 * 23 22 21 42 42 H 1.48491 * 110.00381 * 58.68266 * 24 22 21 43 43 H 1.48503 * 109.99567 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 -0.0034 5 6 4.7284 1.5958 -0.0081 6 8 5.8446 1.1129 -0.0050 7 7 4.5733 2.9346 -0.0157 8 6 5.7493 3.8082 -0.0142 9 1 6.5416 3.3498 0.5776 10 6 6.2369 4.0096 -1.4503 11 6 7.4655 4.9214 -1.4487 12 6 7.0945 6.2759 -0.8414 13 1 6.3023 6.7347 -1.4331 14 8 8.2418 7.1278 -0.8404 15 6 8.3817 7.9158 -2.0241 16 9 8.4945 7.0727 -3.1349 17 9 7.2585 8.7363 -2.1736 18 6 6.6070 6.0745 0.5948 19 6 5.3778 5.1625 0.5930 20 6 3.5375 -0.7492 0.0048 21 6 2.2448 -1.1197 0.0065 22 6 1.7398 -2.5396 0.0137 23 8 0.4812 -2.6010 -0.6603 24 14 2.9654 -3.6389 -0.8579 25 1 -0.3633 0.0060 1.0276 26 1 -0.3633 0.8869 -0.5190 27 1 -0.3633 -0.8930 -0.5086 28 1 1.8767 2.1241 0.0004 29 1 3.6830 3.3198 -0.0178 30 1 6.5015 3.0448 -1.8829 31 1 5.4445 4.4680 -2.0421 32 1 7.8125 5.0653 -2.4719 33 1 8.2577 4.4627 -0.8571 34 1 9.2754 8.5347 -1.9451 35 1 6.3422 7.0393 1.0274 36 1 7.3992 5.6157 1.1865 37 1 4.5855 5.6209 0.0012 38 1 5.0305 5.0190 1.6162 39 1 4.3981 -1.4016 0.0082 40 1 1.6174 -2.8765 1.0431 41 1 0.5151 -2.3148 -1.5834 42 1 4.2870 -3.5594 -0.1856 43 1 2.4787 -5.0420 -0.8581 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:47:11 Heat of formation + Delta-G solvation = -177.748637 kcal Electronic energy + Delta-G solvation = -28660.757200 eV Core-core repulsion = 24150.529477 eV Total energy + Delta-G solvation = -4510.227723 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.143 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -50.06156 -48.17453 -42.47661 -40.91572 -39.66778 -37.84077 -37.60678 -34.80165 -33.71653 -31.92271 -31.63171 -29.85849 -27.48735 -26.52420 -26.05253 -24.16161 -23.81232 -22.69325 -21.45113 -20.93631 -20.46715 -19.39634 -19.01992 -18.68155 -18.63619 -17.49786 -17.12855 -16.98832 -16.76170 -16.20218 -15.97250 -15.65951 -15.54588 -15.42338 -15.18545 -15.00541 -14.91345 -14.70579 -14.59344 -14.38620 -14.19908 -14.07963 -13.71526 -13.45247 -13.41433 -13.26358 -13.22757 -13.00865 -12.78883 -12.40963 -12.21890 -12.15893 -12.09504 -11.96357 -11.52117 -11.11155 -10.97038 -10.70269 -10.12596 -9.57836 -9.22617 -5.00595 0.73684 1.01712 1.37550 1.62257 1.88200 1.97439 2.06872 2.28278 2.54218 2.74138 3.28693 3.50879 3.53921 3.54579 3.73612 3.82448 3.88133 3.95668 3.99083 4.01162 4.08026 4.17313 4.29539 4.36123 4.39248 4.39951 4.43051 4.51590 4.56974 4.70626 4.80674 4.85497 4.93861 4.98775 4.99901 5.06083 5.07961 5.19954 5.24080 5.51270 5.61826 5.62607 5.95645 6.24272 6.58129 6.65415 7.34719 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 N -0.421 5.421 3 C 0.077 3.923 4 C -0.261 4.261 5 C 0.587 3.413 6 O -0.597 6.597 7 N -0.710 5.710 8 C 0.146 3.854 9 H 0.064 0.936 10 C -0.119 4.119 11 C -0.137 4.137 12 C 0.076 3.924 13 H 0.079 0.921 14 O -0.390 6.390 15 C 0.398 3.602 16 F -0.219 7.219 17 F -0.218 7.218 18 C -0.108 4.108 19 C -0.113 4.113 20 C -0.169 4.169 21 C -0.015 4.015 22 C -0.033 4.033 23 O -0.544 6.544 24 Si 0.785 3.215 25 H 0.074 0.926 26 H 0.108 0.892 27 H 0.118 0.882 28 H 0.212 0.788 29 H 0.414 0.586 30 H 0.050 0.950 31 H 0.080 0.920 32 H 0.070 0.930 33 H 0.064 0.936 34 H 0.206 0.794 35 H 0.089 0.911 36 H 0.070 0.930 37 H 0.093 0.907 38 H 0.090 0.910 39 H 0.130 0.870 40 H 0.115 0.885 41 H 0.398 0.602 42 H -0.300 1.300 43 H -0.284 1.284 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.546 4.608 -1.669 8.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.095 5.095 3 C -0.061 4.061 4 C -0.271 4.271 5 C 0.378 3.622 6 O -0.479 6.479 7 N -0.362 5.362 8 C 0.041 3.959 9 H 0.082 0.918 10 C -0.158 4.158 11 C -0.176 4.176 12 C 0.020 3.980 13 H 0.097 0.903 14 O -0.311 6.311 15 C 0.307 3.693 16 F -0.202 7.202 17 F -0.200 7.200 18 C -0.146 4.146 19 C -0.151 4.151 20 C -0.193 4.193 21 C -0.124 4.124 22 C -0.144 4.144 23 O -0.352 6.352 24 Si 0.690 3.310 25 H 0.092 0.908 26 H 0.127 0.873 27 H 0.136 0.864 28 H 0.228 0.772 29 H 0.252 0.748 30 H 0.069 0.931 31 H 0.099 0.901 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.222 0.778 35 H 0.108 0.892 36 H 0.089 0.911 37 H 0.111 0.889 38 H 0.109 0.891 39 H 0.148 0.852 40 H 0.132 0.868 41 H 0.249 0.751 42 H -0.228 1.228 43 H -0.211 1.211 Dipole moment (debyes) X Y Z Total from point charges -6.733 3.346 -0.914 7.574 hybrid contribution -0.155 0.152 0.330 0.395 sum -6.888 3.498 -0.584 7.747 Atomic orbital electron populations 1.22801 0.74179 1.07667 1.04802 1.43733 1.08163 1.04304 1.53251 1.22436 0.88770 0.93374 1.01494 1.20284 0.92443 0.93543 1.20840 1.17725 0.87776 0.82306 0.74423 1.90754 1.27939 1.76249 1.52953 1.45685 1.10392 1.04667 1.75414 1.20962 0.88077 0.90697 0.96177 0.91765 1.21782 0.97704 0.99168 0.97105 1.22061 0.98547 0.95127 1.01854 1.22452 0.86819 0.89473 0.99252 0.90294 1.88437 1.48140 1.56236 1.38319 1.23838 0.89195 0.81579 0.74705 1.93041 1.96401 1.73951 1.56764 1.93041 1.58318 1.73198 1.95484 1.21525 0.97964 1.01274 0.93863 1.21730 0.98089 0.92306 1.02939 1.21722 0.95459 0.93929 1.08199 1.20733 0.90031 0.90043 1.11637 1.24661 0.93652 0.94080 1.02015 1.86426 1.29003 1.89311 1.30461 0.93234 0.73507 0.75336 0.88894 0.90765 0.87333 0.86374 0.77184 0.74843 0.93098 0.90117 0.91106 0.91712 0.77795 0.89225 0.91115 0.88888 0.89121 0.85242 0.86785 0.75117 1.22759 1.21068 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.44 10.71 127.77 1.37 0.93 16 2 N -0.42 1.49 3.09 -533.25 -1.65 -0.15 16 3 C 0.08 -0.28 10.83 83.91 0.91 0.63 16 4 C -0.26 -1.27 6.29 -19.04 -0.12 -1.39 16 5 C 0.59 5.05 7.78 86.62 0.67 5.73 16 6 O -0.60 -11.27 16.63 -4.10 -0.07 -11.34 16 7 N -0.71 0.05 5.07 -445.96 -2.26 -2.21 16 8 C 0.15 0.14 2.45 44.99 0.11 0.25 16 9 H 0.06 0.46 7.57 -2.39 -0.02 0.44 16 10 C -0.12 -0.25 5.50 30.59 0.17 -0.08 16 11 C -0.14 -0.35 5.39 30.59 0.17 -0.19 16 12 C 0.08 0.01 2.40 30.60 0.07 0.09 16 13 H 0.08 -0.05 7.20 -2.39 -0.02 -0.07 16 14 O -0.39 -0.57 10.29 -148.98 -1.53 -2.10 16 15 C 0.40 -0.62 6.26 113.37 0.71 0.09 16 16 F -0.22 -0.59 15.46 44.97 0.70 0.10 16 17 F -0.22 -0.33 16.63 44.97 0.75 0.42 16 18 C -0.11 0.28 5.58 30.61 0.17 0.45 16 19 C -0.11 0.58 5.39 30.61 0.17 0.75 16 20 C -0.17 -1.14 9.49 23.62 0.22 -0.91 16 21 C -0.01 -0.01 6.14 40.98 0.25 0.24 16 22 C -0.03 0.06 2.98 71.24 0.21 0.27 16 23 O -0.54 2.89 9.95 -148.98 -1.48 1.41 16 24 Si 0.78 -0.46 31.29 68.60 2.15 1.69 16 25 H 0.07 -0.67 8.14 -2.39 -0.02 -0.69 16 26 H 0.11 -1.58 8.13 -2.39 -0.02 -1.60 16 27 H 0.12 -1.22 4.93 -2.39 -0.01 -1.23 16 28 H 0.21 -2.70 7.45 -2.91 -0.02 -2.72 16 29 H 0.41 -3.25 7.55 -92.71 -0.70 -3.95 16 30 H 0.05 0.39 8.14 -2.39 -0.02 0.37 16 31 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.07 0.29 6.50 -2.39 -0.02 0.27 16 33 H 0.06 0.32 8.14 -2.39 -0.02 0.30 16 34 H 0.21 -2.03 8.14 -2.39 -0.02 -2.05 16 35 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 38 H 0.09 -0.60 8.14 -2.38 -0.02 -0.62 16 39 H 0.13 1.32 6.67 -2.91 -0.02 1.30 16 40 H 0.11 -0.09 7.96 -2.39 -0.02 -0.11 16 41 H 0.40 -5.09 8.38 -74.06 -0.62 -5.71 16 42 H -0.30 -2.26 6.77 99.48 0.67 -1.59 16 43 H -0.28 -1.33 7.11 99.48 0.71 -0.62 16 Total: 0.00 -26.46 355.11 1.43 -25.03 By element: Atomic # 1 Polarization: -19.44 SS G_CDS: -0.26 Total: -19.69 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: 5.08 Total: 6.85 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -3.91 Total: -2.36 kcal Atomic # 8 Polarization: -8.95 SS G_CDS: -3.08 Total: -12.04 kcal Atomic # 9 Polarization: -0.92 SS G_CDS: 1.44 Total: 0.52 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: 2.15 Total: 1.69 kcal Total: -26.46 1.43 -25.03 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.719 kcal (2) G-P(sol) polarization free energy of solvation -26.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.030 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds