Wall clock time and date at job start Sun Mar 7 2021 05:47:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38977 * 119.95946 * 2 1 4 4 O 1.35717 * 119.91174 * 0.02939 * 3 2 1 5 5 C 1.39012 * 120.17773 * 180.27396 * 3 2 1 6 6 C 1.50706 * 119.95853 * 179.72716 * 5 3 2 7 7 O 1.42903 * 109.46903 * 284.72906 * 6 5 3 8 8 Si 1.86294 * 109.47439 * 164.72877 * 6 5 3 9 9 C 1.37679 * 120.08935 * 359.45478 * 5 3 2 10 10 C 1.39756 * 119.91099 * 0.27206 * 9 5 3 11 11 C 1.47596 * 120.08803 * 180.02562 * 10 9 5 12 12 O 1.21580 * 120.00384 * 359.97438 * 11 10 9 13 13 N 1.34779 * 119.99824 * 179.97438 * 11 10 9 14 14 C 1.46502 * 119.99920 * 179.97438 * 13 11 10 15 15 H 1.08998 * 109.47524 * 325.00492 * 14 13 11 16 16 C 1.53004 * 109.47159 * 85.00436 * 14 13 11 17 17 C 1.52997 * 109.47250 * 179.97438 * 16 14 13 18 18 C 1.52993 * 109.47319 * 299.99905 * 17 16 14 19 19 H 1.08998 * 109.47087 * 300.00363 * 18 17 16 20 20 O 1.42900 * 109.47219 * 179.97438 * 18 17 16 21 21 C 1.42904 * 113.99778 * 90.00136 * 20 18 17 22 22 F 1.39902 * 109.46991 * 299.99752 * 21 20 18 23 23 F 1.39899 * 109.47222 * 59.99853 * 21 20 18 24 24 C 1.53003 * 109.47254 * 59.99874 * 18 17 16 25 25 C 1.52997 * 109.47060 * 300.00284 * 24 18 17 26 26 C 1.37721 * 119.95603 * 179.73016 * 2 1 3 27 27 H 1.08998 * 109.47133 * 270.27288 * 1 2 3 28 28 H 1.09002 * 109.47031 * 30.27012 * 1 2 3 29 29 H 1.08997 * 109.47119 * 150.26744 * 1 2 3 30 30 H 0.96703 * 113.99280 * 270.25072 * 4 3 2 31 31 H 1.09000 * 109.47078 * 44.72419 * 6 5 3 32 32 H 0.96698 * 114.00067 * 59.99708 * 7 6 5 33 33 H 1.48492 * 110.00307 * 178.68375 * 8 6 5 34 34 H 1.48512 * 109.99926 * 300.00223 * 8 6 5 35 35 H 1.07999 * 120.04648 * 180.25260 * 9 5 3 36 36 H 0.97003 * 120.00260 * 0.02562 * 13 11 10 37 37 H 1.08999 * 109.46677 * 300.00320 * 16 14 13 38 38 H 1.08998 * 109.46856 * 59.99648 * 16 14 13 39 39 H 1.09006 * 109.47130 * 179.97438 * 17 16 14 40 40 H 1.09003 * 109.46959 * 60.00387 * 17 16 14 41 41 H 1.09002 * 109.46991 * 179.97438 * 21 20 18 42 42 H 1.08999 * 109.47050 * 179.97438 * 24 18 17 43 43 H 1.09003 * 109.46641 * 59.99753 * 24 18 17 44 44 H 1.08998 * 109.47338 * 299.99545 * 25 24 18 45 45 H 1.09006 * 109.47130 * 179.97438 * 25 24 18 46 46 H 1.07999 * 120.04453 * 359.97438 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5198 2.3779 0.0006 5 6 3.5911 1.2094 -0.0057 6 6 4.3387 2.5179 -0.0119 7 8 4.2722 3.0983 -1.3161 8 14 6.1199 2.2178 0.4440 9 6 4.2859 0.0208 -0.0001 10 6 3.5918 -1.1922 0.0056 11 6 4.3328 -2.4687 0.0122 12 8 5.5485 -2.4660 0.0122 13 7 3.6615 -3.6374 0.0183 14 6 4.3969 -4.9045 0.0243 15 1 5.3072 -4.7991 -0.5660 16 6 4.7622 -5.2754 1.4630 17 6 5.5296 -6.5989 1.4694 18 6 4.6543 -7.6990 0.8657 19 1 3.7440 -7.8039 1.4560 20 8 5.3713 -8.9350 0.8711 21 6 5.1866 -9.7089 2.0582 22 9 5.6220 -8.9743 3.1663 23 9 3.8303 -10.0178 2.2071 24 6 4.2890 -7.3281 -0.5731 25 6 3.5215 -6.0046 -0.5794 26 6 2.1947 -1.1932 0.0056 27 1 -0.3633 0.0049 1.0276 28 1 -0.3633 0.8876 -0.5180 29 1 -0.3633 -0.8923 -0.5097 30 1 1.3187 2.7163 -0.8827 31 1 3.8879 3.1973 0.7115 32 1 3.3726 3.2822 -1.6194 33 1 6.8751 3.4959 0.4106 34 1 6.2027 1.6142 1.7984 35 1 5.3659 0.0257 -0.0005 36 1 2.6915 -3.6397 0.0179 37 1 5.3854 -4.4914 1.8932 38 1 3.8519 -5.3808 2.0533 39 1 5.7902 -6.8630 2.4944 40 1 6.4399 -6.4939 0.8790 41 1 5.7629 -10.6312 1.9840 42 1 3.6658 -8.1121 -1.0032 43 1 5.1993 -7.2231 -1.1634 44 1 2.6113 -6.1095 0.0109 45 1 3.2617 -5.7402 -1.6045 46 1 1.6547 -2.1285 0.0104 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:47:16 Heat of formation + Delta-G solvation = -252.952032 kcal Electronic energy + Delta-G solvation = -32394.727416 eV Core-core repulsion = 27499.756207 eV Total energy + Delta-G solvation = -4894.971208 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.147 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -50.09437 -48.19508 -41.85034 -40.92269 -39.83857 -37.97066 -37.76124 -37.48506 -34.94870 -34.07407 -32.11768 -32.00665 -29.85022 -28.18081 -26.90719 -26.46899 -24.92344 -23.99139 -23.08198 -22.24513 -21.55285 -21.14167 -19.62874 -19.44578 -18.99113 -18.69944 -18.66995 -18.17717 -17.82299 -17.01901 -16.81374 -16.38044 -16.13193 -16.04349 -15.72199 -15.42341 -15.20130 -15.08727 -14.92076 -14.72102 -14.61820 -14.51688 -14.39834 -14.27347 -14.02582 -13.92197 -13.74141 -13.48910 -13.45733 -13.37035 -13.13826 -12.98360 -12.78059 -12.46418 -12.31673 -12.29049 -12.04862 -11.95630 -11.59808 -11.31423 -11.22604 -11.13209 -10.91906 -10.18464 -10.02345 -9.75929 -4.82031 -0.47263 0.01319 1.37339 1.58760 1.72852 1.83260 2.00901 2.03453 2.52774 2.64340 2.90048 3.32887 3.39593 3.41949 3.47425 3.54694 3.58552 3.73114 3.74535 3.86387 3.91097 3.93396 4.01405 4.04511 4.07422 4.19030 4.24905 4.29508 4.32269 4.43078 4.47398 4.52843 4.56552 4.58567 4.77049 4.85443 4.90360 4.95828 4.99274 5.01789 5.05127 5.12193 5.16071 5.16467 5.36895 5.45368 5.54759 6.29300 6.37470 6.45034 7.12614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.113 4.113 3 C 0.141 3.859 4 O -0.490 6.490 5 C -0.142 4.142 6 C -0.075 4.075 7 O -0.530 6.530 8 Si 0.740 3.260 9 C -0.040 4.040 10 C -0.134 4.134 11 C 0.562 3.438 12 O -0.527 6.527 13 N -0.723 5.723 14 C 0.143 3.857 15 H 0.096 0.904 16 C -0.127 4.127 17 C -0.141 4.141 18 C 0.077 3.923 19 H 0.075 0.925 20 O -0.378 6.378 21 C 0.404 3.596 22 F -0.207 7.207 23 F -0.209 7.209 24 C -0.110 4.110 25 C -0.124 4.124 26 C -0.068 4.068 27 H 0.076 0.924 28 H 0.071 0.929 29 H 0.070 0.930 30 H 0.393 0.607 31 H 0.081 0.919 32 H 0.359 0.641 33 H -0.251 1.251 34 H -0.249 1.249 35 H 0.147 0.853 36 H 0.399 0.601 37 H 0.077 0.923 38 H 0.066 0.934 39 H 0.079 0.921 40 H 0.078 0.922 41 H 0.168 0.832 42 H 0.080 0.920 43 H 0.080 0.920 44 H 0.072 0.928 45 H 0.081 0.919 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.773 -2.549 -2.707 6.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.113 4.113 3 C 0.096 3.904 4 O -0.301 6.301 5 C -0.143 4.143 6 C -0.184 4.184 7 O -0.334 6.334 8 Si 0.637 3.363 9 C -0.058 4.058 10 C -0.137 4.137 11 C 0.349 3.651 12 O -0.404 6.404 13 N -0.375 5.375 14 C 0.038 3.962 15 H 0.114 0.886 16 C -0.166 4.166 17 C -0.180 4.180 18 C 0.020 3.980 19 H 0.093 0.907 20 O -0.300 6.300 21 C 0.312 3.688 22 F -0.189 7.189 23 F -0.191 7.191 24 C -0.148 4.148 25 C -0.162 4.162 26 C -0.087 4.087 27 H 0.095 0.905 28 H 0.090 0.910 29 H 0.089 0.911 30 H 0.251 0.749 31 H 0.099 0.901 32 H 0.206 0.794 33 H -0.176 1.176 34 H -0.173 1.173 35 H 0.164 0.836 36 H 0.235 0.765 37 H 0.096 0.904 38 H 0.085 0.915 39 H 0.098 0.902 40 H 0.097 0.903 41 H 0.185 0.815 42 H 0.098 0.902 43 H 0.099 0.901 44 H 0.091 0.909 45 H 0.100 0.900 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -2.486 -2.515 -1.623 3.891 hybrid contribution -2.484 0.756 0.238 2.608 sum -4.970 -1.759 -1.386 5.451 Atomic orbital electron populations 1.20700 0.89632 1.03210 1.03142 1.20176 0.97281 0.92045 1.01843 1.18345 0.88781 0.85265 0.98002 1.84788 1.75890 1.35860 1.33590 1.20591 0.93464 0.96409 1.03806 1.25412 1.13315 0.91323 0.88316 1.86843 1.31852 1.83221 1.31499 0.92714 0.75069 0.84853 0.83614 1.20942 1.00202 0.89999 0.94674 1.19866 0.93474 0.93525 1.06884 1.18112 0.87288 0.83517 0.76171 1.90820 1.13145 1.87417 1.48970 1.45956 1.10302 1.05452 1.75778 1.21099 0.96163 0.81905 0.96989 0.88585 1.21884 1.00910 0.97245 0.96545 1.22122 0.99418 0.93792 1.02637 1.22411 0.94630 0.82421 0.98508 0.90706 1.88447 1.70457 1.33543 1.37534 1.23208 0.78340 0.91663 0.75567 1.93067 1.89399 1.80168 1.56240 1.93066 1.37324 1.93208 1.95469 1.21505 1.01646 0.96892 0.94756 1.21779 0.98614 0.93532 1.02279 1.21095 0.92597 0.97817 0.97207 0.90540 0.91009 0.91084 0.74933 0.90131 0.79435 1.17595 1.17288 0.83574 0.76509 0.90434 0.91515 0.90244 0.90290 0.81549 0.90169 0.90108 0.90924 0.90015 0.84921 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.30 9.78 36.01 0.35 0.66 16 2 C -0.11 0.11 5.89 -104.54 -0.62 -0.50 16 3 C 0.14 -0.02 6.62 -39.02 -0.26 -0.27 16 4 O -0.49 0.71 11.54 -18.86 -0.22 0.49 16 5 C -0.14 -0.12 5.27 -104.54 -0.55 -0.67 16 6 C -0.08 -0.07 2.33 36.01 0.08 0.02 16 7 O -0.53 -0.31 12.65 -35.23 -0.45 -0.75 16 8 Si 0.74 0.99 30.17 -169.99 -5.13 -4.13 16 9 C -0.04 -0.06 8.20 -39.22 -0.32 -0.38 16 10 C -0.13 -0.10 5.87 -104.96 -0.62 -0.71 16 11 C 0.56 0.92 7.73 -12.44 -0.10 0.82 16 12 O -0.53 -2.67 16.00 5.30 0.08 -2.58 16 13 N -0.72 0.96 5.03 -54.82 -0.28 0.68 16 14 C 0.14 -0.16 2.46 -67.93 -0.17 -0.33 16 15 H 0.10 0.06 7.58 -51.93 -0.39 -0.33 16 16 C -0.13 0.06 5.49 -26.73 -0.15 -0.09 16 17 C -0.14 0.03 5.39 -26.74 -0.14 -0.11 16 18 C 0.08 -0.05 2.40 -26.73 -0.06 -0.11 16 19 H 0.07 -0.04 7.20 -51.93 -0.37 -0.42 16 20 O -0.38 -0.07 10.29 -35.23 -0.36 -0.43 16 21 C 0.40 -0.39 6.26 101.05 0.63 0.25 16 22 F -0.21 -0.18 15.46 2.25 0.03 -0.14 16 23 F -0.21 -0.15 16.63 2.25 0.04 -0.11 16 24 C -0.11 0.22 5.57 -26.73 -0.15 0.07 16 25 C -0.12 0.37 5.39 -26.73 -0.14 0.23 16 26 C -0.07 0.10 9.18 -39.22 -0.36 -0.26 16 27 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 28 H 0.07 -0.23 7.53 -51.93 -0.39 -0.62 16 29 H 0.07 -0.28 8.08 -51.93 -0.42 -0.70 16 30 H 0.39 -2.38 8.58 45.56 0.39 -1.99 16 31 H 0.08 0.08 7.81 -51.93 -0.41 -0.32 16 32 H 0.36 -1.12 8.24 45.56 0.38 -0.75 16 33 H -0.25 -0.93 7.11 56.52 0.40 -0.53 16 34 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 35 H 0.15 0.19 4.70 -52.49 -0.25 -0.05 16 36 H 0.40 -1.59 6.62 -40.82 -0.27 -1.86 16 37 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 38 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.08 0.05 6.50 -51.93 -0.34 -0.29 16 40 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 41 H 0.17 -0.78 8.14 -51.93 -0.42 -1.20 16 42 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 43 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 44 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 45 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 46 H 0.13 -0.57 6.39 -52.49 -0.34 -0.91 16 LS Contribution 378.34 15.07 5.70 5.70 Total: 0.00 -8.89 378.34 -8.55 -17.43 By element: Atomic # 1 Polarization: -9.33 SS G_CDS: -5.41 Total: -14.74 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -2.57 Total: -1.42 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -0.28 Total: 0.68 kcal Atomic # 8 Polarization: -2.34 SS G_CDS: -0.94 Total: -3.28 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.07 Total: -0.25 kcal Atomic # 14 Polarization: 0.99 SS G_CDS: -5.13 Total: -4.13 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -8.89 -8.55 -17.43 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -235.518 kcal (2) G-P(sol) polarization free energy of solvation -8.887 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -244.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.547 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.434 kcal (6) G-S(sol) free energy of system = (1) + (5) -252.952 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds