Wall clock time and date at job start Sun Mar 7 2021 05:47:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86307 * 109.47096 * 2 1 4 4 C 1.50695 * 109.46967 * 119.99925 * 2 1 3 5 5 C 1.33738 * 125.12256 * 64.97481 * 4 2 1 6 6 C 1.37803 * 115.08441 * 179.74956 * 5 4 2 7 7 C 1.34979 * 114.69582 * 0.46499 * 6 5 4 8 8 C 1.47566 * 125.27284 * 179.82975 * 7 6 5 9 9 C 1.39822 * 119.99558 * 359.44233 * 8 7 6 10 10 C 1.36568 * 119.99596 * 179.75760 * 9 8 7 11 11 C 1.39831 * 120.00010 * 0.53929 * 10 9 8 12 12 C 1.47555 * 120.00215 * 179.73521 * 11 10 9 13 13 O 1.21588 * 120.00008 * 179.97438 * 12 11 10 14 14 N 1.34777 * 119.99814 * 359.97438 * 12 11 10 15 15 C 1.46505 * 119.99981 * 179.97438 * 14 12 11 16 16 H 1.09005 * 109.46723 * 35.00263 * 15 14 12 17 17 C 1.52999 * 109.47086 * 155.00190 * 15 14 12 18 18 C 1.52996 * 109.46865 * 180.02562 * 17 15 14 19 19 C 1.53003 * 109.47423 * 299.99700 * 18 17 15 20 20 H 1.09003 * 109.46587 * 300.00502 * 19 18 17 21 21 O 1.42895 * 109.47084 * 180.02562 * 19 18 17 22 22 C 1.42898 * 113.99792 * 150.00387 * 21 19 18 23 23 F 1.39909 * 109.47068 * 299.99715 * 22 21 19 24 24 F 1.39900 * 109.47359 * 59.99390 * 22 21 19 25 25 C 1.53003 * 109.46681 * 59.99966 * 19 18 17 26 26 C 1.52996 * 109.47219 * 300.00158 * 25 19 18 27 27 C 1.39837 * 119.99496 * 359.71613 * 11 10 9 28 28 C 1.36554 * 119.99815 * 359.97438 * 27 11 10 29 29 S 1.75866 * 125.11816 * 244.97743 * 4 2 1 30 30 H 0.96707 * 114.00196 * 300.00363 * 1 2 3 31 31 H 1.08998 * 109.47282 * 239.99905 * 2 1 3 32 32 H 1.48503 * 109.99568 * 300.00073 * 3 2 1 33 33 H 1.48494 * 109.99964 * 61.31563 * 3 2 1 34 34 H 1.08006 * 122.45948 * 359.97438 * 5 4 2 35 35 H 1.07993 * 122.64748 * 180.29174 * 6 5 4 36 36 H 1.08004 * 120.00213 * 0.02562 * 9 8 7 37 37 H 1.08007 * 119.99776 * 180.23041 * 10 9 8 38 38 H 0.97005 * 120.00189 * 0.02562 * 14 12 11 39 39 H 1.09007 * 109.47001 * 300.00186 * 17 15 14 40 40 H 1.08992 * 109.47259 * 60.00116 * 17 15 14 41 41 H 1.09001 * 109.47694 * 60.00329 * 18 17 15 42 42 H 1.09006 * 109.46800 * 179.97438 * 18 17 15 43 43 H 1.09003 * 109.47301 * 179.97438 * 22 21 19 44 44 H 1.09001 * 109.46515 * 60.00546 * 25 19 18 45 45 H 1.08998 * 109.46785 * 179.97438 * 25 19 18 46 46 H 1.08992 * 109.47305 * 300.00118 * 26 25 19 47 47 H 1.09003 * 109.46875 * 179.97438 * 26 25 19 48 48 H 1.07997 * 119.99418 * 179.97438 * 27 11 10 49 49 H 1.08004 * 119.99889 * 180.02562 * 28 27 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.7515 -2.0086 1.4967 6 6 2.3042 -2.4440 2.6815 7 6 2.9342 -1.4871 3.3952 8 6 3.6022 -1.6939 4.6946 9 6 3.6039 -2.9610 5.2858 10 6 4.2264 -3.1536 6.4861 11 6 4.8521 -2.0811 7.1291 12 6 5.5196 -2.2879 8.4287 13 8 6.0642 -1.3554 8.9876 14 7 5.5257 -3.5103 8.9962 15 6 6.1889 -3.7158 10.2863 16 1 6.0655 -2.8261 10.9040 17 6 5.5642 -4.9193 10.9950 18 6 6.2564 -5.1334 12.3425 19 6 7.7470 -5.3929 12.1147 20 1 7.8706 -6.2826 11.4972 21 8 8.3933 -5.5934 13.3733 22 6 9.5258 -6.4629 13.3130 23 9 9.1240 -7.7206 12.8502 24 9 10.4789 -5.9274 12.4401 25 6 8.3716 -4.1894 11.4060 26 6 7.6794 -3.9753 10.0585 27 6 4.8457 -0.8128 6.5403 28 6 4.2287 -0.6218 5.3371 29 16 2.8422 0.0430 2.5326 30 1 -0.3934 0.4418 0.7651 31 1 1.7924 -0.5138 -0.8899 32 1 1.5614 2.4679 -1.2085 33 1 1.5878 2.4586 1.2241 34 1 1.2156 -2.6682 0.8301 35 1 2.2361 -3.4692 3.0141 36 1 3.1168 -3.7884 4.7912 37 1 4.2309 -4.1332 6.9410 38 1 5.0916 -4.2544 8.5501 39 1 4.5024 -4.7343 11.1576 40 1 5.6876 -5.8089 10.3774 41 1 6.1327 -4.2438 12.9600 42 1 5.8111 -5.9906 12.8475 43 1 9.9602 -6.5631 14.3077 44 1 8.2479 -3.2997 12.0235 45 1 9.4336 -4.3740 11.2441 46 1 7.8031 -4.8649 9.4410 47 1 8.1242 -3.1175 9.5538 48 1 5.3287 0.0156 7.0372 49 1 4.2241 0.3577 4.8821 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:47:30 Heat of formation + Delta-G solvation = -167.097763 kcal Electronic energy + Delta-G solvation = -34882.726452 eV Core-core repulsion = 29730.870422 eV Total energy + Delta-G solvation = -5151.856030 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.120 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -50.07094 -48.18466 -41.57689 -40.41642 -39.68853 -39.03472 -37.74003 -37.45549 -35.02462 -33.48691 -32.29466 -31.94843 -30.76485 -29.73139 -27.23948 -26.31007 -24.80292 -24.08924 -23.84546 -23.57803 -22.92649 -21.60382 -21.26427 -20.29025 -19.48926 -19.17583 -18.81170 -18.64656 -18.51044 -17.79227 -17.37921 -16.75249 -16.49956 -16.28633 -16.19790 -16.15896 -15.92596 -15.68619 -15.51219 -15.20835 -15.08931 -14.97916 -14.61558 -14.55608 -14.47876 -14.37020 -14.33563 -14.19171 -13.80670 -13.72362 -13.63144 -13.43011 -13.31248 -13.25934 -13.09551 -12.82070 -12.56264 -12.44041 -12.41575 -12.24151 -12.10250 -11.97794 -11.54474 -11.50558 -11.17230 -11.03925 -10.83405 -10.68332 -10.19335 -10.16872 -9.56350 -9.03719 -5.07834 -0.89173 0.25204 0.33901 0.39002 0.76313 1.20519 1.51636 1.55899 1.84402 1.91685 1.96171 2.10727 2.73095 2.82868 3.31001 3.40725 3.48496 3.52512 3.64993 3.68673 3.72602 3.74349 3.82388 3.84536 3.95437 3.99221 4.05203 4.14809 4.20137 4.28356 4.31824 4.37433 4.42140 4.51066 4.52096 4.56228 4.62063 4.68370 4.82059 4.92048 4.97440 5.01281 5.04118 5.05588 5.10118 5.13334 5.20072 5.23589 5.28978 5.32462 5.41610 5.48429 5.60530 5.73303 6.36888 6.44691 7.11995 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.033 4.033 3 Si 0.707 3.293 4 C -0.218 4.218 5 C -0.109 4.109 6 C -0.116 4.116 7 C -0.159 4.159 8 C 0.006 3.994 9 C -0.108 4.108 10 C -0.067 4.067 11 C -0.151 4.151 12 C 0.557 3.443 13 O -0.580 6.580 14 N -0.707 5.707 15 C 0.144 3.856 16 H 0.070 0.930 17 C -0.114 4.114 18 C -0.108 4.108 19 C 0.075 3.925 20 H 0.078 0.922 21 O -0.389 6.389 22 C 0.398 3.602 23 F -0.218 7.218 24 F -0.220 7.220 25 C -0.137 4.137 26 C -0.121 4.121 27 C -0.065 4.065 28 C -0.129 4.129 29 S 0.118 5.882 30 H 0.387 0.613 31 H 0.140 0.860 32 H -0.272 1.272 33 H -0.266 1.266 34 H 0.156 0.844 35 H 0.167 0.833 36 H 0.161 0.839 37 H 0.164 0.836 38 H 0.416 0.584 39 H 0.093 0.907 40 H 0.092 0.908 41 H 0.072 0.928 42 H 0.089 0.911 43 H 0.206 0.794 44 H 0.066 0.934 45 H 0.070 0.930 46 H 0.079 0.921 47 H 0.052 0.948 48 H 0.128 0.872 49 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.278 -5.930 -0.527 6.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.146 4.146 3 Si 0.609 3.391 4 C -0.335 4.335 5 C -0.139 4.139 6 C -0.146 4.146 7 C -0.276 4.276 8 C 0.004 3.996 9 C -0.128 4.128 10 C -0.085 4.085 11 C -0.154 4.154 12 C 0.346 3.654 13 O -0.461 6.461 14 N -0.359 5.359 15 C 0.039 3.961 16 H 0.089 0.911 17 C -0.152 4.152 18 C -0.146 4.146 19 C 0.019 3.981 20 H 0.096 0.904 21 O -0.311 6.311 22 C 0.307 3.693 23 F -0.201 7.201 24 F -0.202 7.202 25 C -0.176 4.176 26 C -0.159 4.159 27 C -0.084 4.084 28 C -0.148 4.148 29 S 0.386 5.614 30 H 0.237 0.763 31 H 0.158 0.842 32 H -0.197 1.197 33 H -0.191 1.191 34 H 0.173 0.827 35 H 0.185 0.815 36 H 0.179 0.821 37 H 0.182 0.818 38 H 0.255 0.745 39 H 0.111 0.889 40 H 0.110 0.890 41 H 0.091 0.909 42 H 0.108 0.892 43 H 0.222 0.778 44 H 0.085 0.915 45 H 0.088 0.912 46 H 0.098 0.902 47 H 0.071 0.929 48 H 0.146 0.854 49 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.562 -3.185 -0.290 3.247 hybrid contribution -1.295 -1.407 -0.256 1.929 sum -1.856 -4.592 -0.546 4.983 Atomic orbital electron populations 1.86603 1.17842 1.80205 1.50108 1.24447 0.83343 1.10093 0.96679 0.94433 0.91216 0.73919 0.79499 1.25082 1.07976 0.98747 1.01742 1.20213 1.00927 0.94777 0.97982 1.20650 0.98400 1.01238 0.94303 1.23170 1.07639 0.97510 0.99311 1.18467 0.95463 0.94542 0.91113 1.21207 0.99686 0.96381 0.95528 1.21275 0.94107 0.98684 0.94475 1.20028 1.03972 0.95762 0.95652 1.18489 0.78948 0.82843 0.85102 1.90787 1.47232 1.42963 1.65081 1.45832 1.56923 1.10620 1.22487 1.21039 0.91555 0.99459 0.84016 0.91134 1.21734 1.00732 0.97272 0.95483 1.21513 0.91324 1.03841 0.97926 1.22462 0.93877 0.98120 0.83646 0.90405 1.88438 1.43155 1.65878 1.33618 1.23840 0.79078 0.73002 0.93388 1.93045 1.91060 1.44267 1.91682 1.93041 1.66070 1.86339 1.74727 1.22057 1.00407 0.98722 0.96394 1.21795 0.94993 1.02215 0.96920 1.20939 0.96237 0.96744 0.94445 1.21020 0.99064 0.99134 0.95565 1.84287 1.53005 1.10846 1.13283 0.76322 0.84236 1.19747 1.19144 0.82685 0.81523 0.82112 0.81845 0.74523 0.88877 0.88962 0.90927 0.89233 0.77809 0.91492 0.91151 0.90191 0.92892 0.85447 0.84946 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.52 12.88 -148.98 -1.92 -2.44 16 2 C -0.03 0.06 2.96 71.23 0.21 0.27 16 3 Si 0.71 -0.90 30.97 68.60 2.12 1.22 16 4 C -0.22 0.23 5.71 24.66 0.14 0.37 16 5 C -0.11 0.21 10.03 21.14 0.21 0.42 16 6 C -0.12 0.32 9.64 21.42 0.21 0.53 16 7 C -0.16 0.05 6.37 23.98 0.15 0.20 16 8 C 0.01 0.00 5.88 -20.05 -0.12 -0.12 16 9 C -0.11 0.47 9.48 22.26 0.21 0.68 16 10 C -0.07 0.31 9.48 22.26 0.21 0.52 16 11 C -0.15 -0.29 5.88 -20.05 -0.12 -0.41 16 12 C 0.56 2.81 7.73 86.70 0.67 3.48 16 13 O -0.58 -8.19 15.99 -3.99 -0.06 -8.26 16 14 N -0.71 1.60 5.03 -445.66 -2.24 -0.64 16 15 C 0.14 -0.16 2.45 44.99 0.11 -0.05 16 16 H 0.07 0.30 7.58 -2.38 -0.02 0.28 16 17 C -0.11 0.76 5.39 30.59 0.16 0.92 16 18 C -0.11 0.42 5.57 30.59 0.17 0.59 16 19 C 0.08 -0.06 2.40 30.60 0.07 0.01 16 20 H 0.08 -0.11 7.20 -2.39 -0.02 -0.12 16 21 O -0.39 -0.25 10.29 -148.98 -1.53 -1.79 16 22 C 0.40 -0.84 6.26 113.37 0.71 -0.13 16 23 F -0.22 -0.24 16.63 44.97 0.75 0.50 16 24 F -0.22 -0.47 15.46 44.97 0.70 0.22 16 25 C -0.14 -0.17 5.39 30.59 0.17 0.00 16 26 C -0.12 -0.06 5.50 30.59 0.17 0.11 16 27 C -0.06 -0.26 9.53 22.26 0.21 -0.05 16 28 C -0.13 -0.24 9.54 22.26 0.21 -0.03 16 29 S 0.12 -0.02 19.48 -56.49 -1.10 -1.12 16 30 H 0.39 -1.59 8.70 -74.05 -0.64 -2.24 16 31 H 0.14 -0.59 7.96 -2.39 -0.02 -0.61 16 32 H -0.27 -1.33 7.11 99.48 0.71 -0.62 16 33 H -0.27 -0.76 7.11 99.48 0.71 -0.05 16 34 H 0.16 -0.63 8.06 -2.91 -0.02 -0.65 16 35 H 0.17 -1.32 6.88 -2.91 -0.02 -1.34 16 36 H 0.16 -1.61 6.74 -2.91 -0.02 -1.63 16 37 H 0.16 -2.00 6.38 -2.91 -0.02 -2.02 16 38 H 0.42 -3.89 6.61 -92.70 -0.61 -4.50 16 39 H 0.09 -0.77 8.14 -2.38 -0.02 -0.79 16 40 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 41 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 42 H 0.09 -0.47 8.14 -2.38 -0.02 -0.49 16 43 H 0.21 -2.13 8.14 -2.39 -0.02 -2.15 16 44 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 45 H 0.07 0.21 6.50 -2.39 -0.02 0.20 16 46 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 47 H 0.05 0.29 8.14 -2.39 -0.02 0.28 16 48 H 0.13 0.75 7.64 -2.91 -0.02 0.73 16 49 H 0.13 0.04 7.26 -2.91 -0.02 0.02 16 Total: 0.00 -22.06 418.78 0.28 -21.78 By element: Atomic # 1 Polarization: -16.61 SS G_CDS: -0.19 Total: -16.81 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: 3.77 Total: 7.33 kcal Atomic # 7 Polarization: 1.60 SS G_CDS: -2.24 Total: -0.64 kcal Atomic # 8 Polarization: -8.96 SS G_CDS: -3.52 Total: -12.48 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 1.44 Total: 0.72 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: 2.12 Total: 1.22 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -1.10 Total: -1.12 kcal Total: -22.06 0.28 -21.78 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.322 kcal (2) G-P(sol) polarization free energy of solvation -22.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -167.381 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.775 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.098 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds