Wall clock time and date at job start Sun Mar 7 2021 05:48:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86304 * 109.46725 * 2 1 4 4 C 1.50699 * 109.47184 * 119.99892 * 2 1 3 5 5 C 1.34493 * 125.49581 * 209.69689 * 4 2 1 6 6 C 1.46748 * 106.36829 * 179.91355 * 5 4 2 7 7 C 1.47261 * 126.97176 * 180.12508 * 6 5 4 8 8 O 1.21625 * 120.00349 * 180.24670 * 7 6 5 9 9 N 1.34775 * 119.99890 * 0.24166 * 7 6 5 10 10 C 1.46504 * 120.00202 * 179.97438 * 9 7 6 11 11 H 1.09000 * 109.46763 * 35.00220 * 10 9 7 12 12 C 1.53002 * 109.47140 * 154.99915 * 10 9 7 13 13 C 1.53003 * 109.47061 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47099 * 300.00339 * 13 12 10 15 15 H 1.09000 * 109.47147 * 299.99778 * 14 13 12 16 16 O 1.42902 * 109.47274 * 179.97438 * 14 13 12 17 17 C 1.42901 * 113.99882 * 149.99694 * 16 14 13 18 18 F 1.39901 * 109.47209 * 300.00064 * 17 16 14 19 19 F 1.39897 * 109.46997 * 60.00387 * 17 16 14 20 20 C 1.53002 * 109.47441 * 59.99893 * 14 13 12 21 21 C 1.52997 * 109.47197 * 275.00363 * 10 9 7 22 22 C 1.36331 * 106.05783 * 0.32480 * 6 5 4 23 23 C 1.51005 * 126.78930 * 179.83629 * 22 6 5 24 24 C 1.53398 * 108.25223 * 164.30463 * 23 22 6 25 25 C 1.53163 * 109.03950 * 48.46899 * 24 23 22 26 26 C 1.53127 * 109.52676 * 290.42744 * 25 24 23 27 27 N 1.35212 * 108.66731 * 359.82385 * 22 6 5 28 28 H 0.96696 * 114.00096 * 60.00322 * 1 2 3 29 29 H 1.09002 * 109.47382 * 239.99890 * 2 1 3 30 30 H 1.48495 * 110.00011 * 59.99860 * 3 2 1 31 31 H 1.48509 * 109.99497 * 181.31874 * 3 2 1 32 32 H 1.08004 * 126.81231 * 0.02562 * 5 4 2 33 33 H 0.97004 * 119.99905 * 0.02562 * 9 7 6 34 34 H 1.08994 * 109.47388 * 300.00407 * 12 10 9 35 35 H 1.09000 * 109.47044 * 60.00477 * 12 10 9 36 36 H 1.09000 * 109.46940 * 60.00244 * 13 12 10 37 37 H 1.08996 * 109.47014 * 180.02562 * 13 12 10 38 38 H 1.09001 * 109.46612 * 180.02562 * 17 16 14 39 39 H 1.09000 * 109.47044 * 59.99821 * 20 14 13 40 40 H 1.08994 * 109.47388 * 179.97438 * 20 14 13 41 41 H 1.09000 * 109.47147 * 299.99622 * 21 10 9 42 42 H 1.08996 * 109.47303 * 59.99879 * 21 10 9 43 43 H 1.08998 * 109.70796 * 44.61860 * 23 22 6 44 44 H 1.08995 * 109.74328 * 284.01555 * 23 22 6 45 45 H 1.08992 * 109.54537 * 288.60378 * 24 23 22 46 46 H 1.08996 * 109.61645 * 168.38238 * 24 23 22 47 47 H 1.08998 * 109.46109 * 170.40759 * 25 24 23 48 48 H 1.08998 * 109.45142 * 50.44184 * 25 24 23 49 49 H 1.08999 * 109.56306 * 291.15671 * 26 25 24 50 50 H 1.09009 * 109.55950 * 170.82485 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 3.0885 -0.4502 1.8647 6 6 3.1558 -1.3782 2.9995 7 6 4.2344 -1.4808 3.9969 8 8 4.1618 -2.3047 4.8886 9 7 5.3020 -0.6618 3.9215 10 6 6.3748 -0.7634 4.9141 11 1 6.5043 -1.8063 5.2035 12 6 7.6785 -0.2357 4.3118 13 6 8.7990 -0.3424 5.3482 14 6 8.4342 0.4870 6.5810 15 1 8.3048 1.5300 6.2919 16 8 9.4804 0.3868 7.5492 17 6 9.6207 1.5445 8.3752 18 9 9.9038 2.6567 7.5751 19 9 8.4299 1.7647 9.0755 20 6 7.1304 -0.0408 7.1833 21 6 6.0096 0.0663 6.1465 22 6 2.0195 -2.1292 2.9404 23 6 1.6153 -3.2338 3.8874 24 6 0.1222 -3.5198 3.6826 25 6 -0.1567 -3.6701 2.1841 26 6 -0.0052 -2.3103 1.4964 27 7 1.2885 -1.7251 1.8772 28 1 -0.3933 0.4416 -0.7650 29 1 1.7924 -0.5138 -0.8900 30 1 1.5613 2.4679 1.2084 31 1 3.5346 1.7703 -0.0321 32 1 3.8216 0.2952 1.5938 33 1 5.3598 -0.0045 3.2105 34 1 7.9387 -0.8268 3.4338 35 1 7.5491 0.8072 4.0224 36 1 8.9284 -1.3854 5.6373 37 1 9.7277 0.0340 4.9193 38 1 10.4354 1.3894 9.0826 39 1 7.2598 -1.0838 7.4723 40 1 6.8708 0.5498 8.0618 41 1 5.8802 1.1092 5.8571 42 1 5.0809 -0.3097 6.5756 43 1 1.7915 -2.9189 4.9160 44 1 2.1944 -4.1322 3.6738 45 1 -0.4655 -2.6933 4.0817 46 1 -0.1478 -4.4415 4.1980 47 1 -1.1719 -4.0394 2.0389 48 1 0.5519 -4.3766 1.7520 49 1 -0.8122 -1.6494 1.8127 50 1 -0.0420 -2.4422 0.4149 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15100670_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:48:14 Heat of formation + Delta-G solvation = -194.120690 kcal Electronic energy + Delta-G solvation = -34934.091717 eV Core-core repulsion = 29983.852671 eV Total energy + Delta-G solvation = -4950.239047 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.174 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -50.04597 -48.14727 -42.73028 -40.81326 -39.54048 -38.00582 -37.53885 -36.89590 -34.55453 -33.48561 -31.90904 -31.27784 -30.39212 -29.00528 -26.71047 -26.27207 -24.54977 -24.23989 -23.84952 -22.71678 -21.65610 -21.30741 -20.85363 -19.56481 -19.25740 -18.80314 -18.62103 -18.52184 -18.14157 -17.22545 -16.82114 -16.52326 -16.14927 -15.91507 -15.79811 -15.54466 -15.49844 -15.19014 -15.12850 -15.01676 -14.88429 -14.62938 -14.54537 -14.47235 -14.28061 -14.19086 -14.07952 -13.82868 -13.67061 -13.36962 -13.26820 -13.21057 -12.89867 -12.75831 -12.46389 -12.36403 -12.20940 -12.09347 -12.03995 -11.93646 -11.85241 -11.80494 -11.49458 -11.02359 -10.69360 -10.61692 -9.91933 -9.54498 -8.97565 -5.08504 0.87364 0.97800 1.38647 1.60816 1.82523 1.94373 1.99618 2.45770 2.69869 2.71721 3.04636 3.46908 3.49637 3.53640 3.57232 3.65713 3.69581 3.79330 3.80771 3.82426 3.99278 4.00710 4.11245 4.15152 4.16947 4.27734 4.32369 4.33402 4.38359 4.40054 4.43096 4.54751 4.59114 4.69069 4.69728 4.76959 4.80622 4.86974 4.91312 4.95554 5.03901 5.06166 5.13876 5.17666 5.19246 5.26160 5.30098 5.61084 5.65621 5.74815 6.10550 6.23460 6.39883 6.74168 7.52469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.048 4.048 3 Si 0.708 3.292 4 C 0.037 3.963 5 C -0.178 4.178 6 C -0.234 4.234 7 C 0.596 3.404 8 O -0.546 6.546 9 N -0.726 5.726 10 C 0.145 3.855 11 H 0.093 0.907 12 C -0.124 4.124 13 C -0.109 4.109 14 C 0.077 3.923 15 H 0.075 0.925 16 O -0.379 6.379 17 C 0.404 3.596 18 F -0.209 7.209 19 F -0.207 7.207 20 C -0.141 4.141 21 C -0.126 4.126 22 C 0.121 3.879 23 C -0.055 4.055 24 C -0.129 4.129 25 C -0.140 4.140 26 C 0.114 3.886 27 N -0.422 5.422 28 H 0.387 0.613 29 H 0.077 0.923 30 H -0.253 1.253 31 H -0.254 1.254 32 H 0.144 0.856 33 H 0.398 0.602 34 H 0.080 0.920 35 H 0.071 0.929 36 H 0.079 0.921 37 H 0.079 0.921 38 H 0.168 0.832 39 H 0.077 0.923 40 H 0.078 0.922 41 H 0.065 0.935 42 H 0.076 0.924 43 H 0.100 0.900 44 H 0.089 0.911 45 H 0.068 0.932 46 H 0.080 0.920 47 H 0.089 0.911 48 H 0.074 0.926 49 H 0.088 0.912 50 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.819 1.402 -6.054 6.475 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.157 4.157 3 Si 0.607 3.393 4 C -0.072 4.072 5 C -0.202 4.202 6 C -0.244 4.244 7 C 0.386 3.614 8 O -0.425 6.425 9 N -0.377 5.377 10 C 0.041 3.959 11 H 0.111 0.889 12 C -0.162 4.162 13 C -0.147 4.147 14 C 0.021 3.979 15 H 0.093 0.907 16 O -0.300 6.300 17 C 0.312 3.688 18 F -0.191 7.191 19 F -0.189 7.189 20 C -0.179 4.179 21 C -0.165 4.165 22 C 0.003 3.997 23 C -0.092 4.092 24 C -0.167 4.167 25 C -0.178 4.178 26 C -0.006 4.006 27 N -0.097 5.097 28 H 0.236 0.764 29 H 0.095 0.905 30 H -0.177 1.177 31 H -0.179 1.179 32 H 0.162 0.838 33 H 0.232 0.768 34 H 0.099 0.901 35 H 0.090 0.910 36 H 0.098 0.902 37 H 0.097 0.903 38 H 0.184 0.816 39 H 0.096 0.904 40 H 0.096 0.904 41 H 0.083 0.917 42 H 0.095 0.905 43 H 0.119 0.881 44 H 0.107 0.893 45 H 0.087 0.913 46 H 0.099 0.901 47 H 0.107 0.893 48 H 0.092 0.908 49 H 0.106 0.894 50 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -1.550 0.835 -4.566 4.894 hybrid contribution -0.102 0.229 -0.286 0.380 sum -1.652 1.064 -4.852 5.235 Atomic orbital electron populations 1.86423 1.17339 1.81904 1.50196 1.24442 0.85448 1.10393 0.95467 0.95523 0.80792 0.75360 0.87623 1.19646 0.94738 0.94465 0.98325 1.21607 0.98224 1.02931 0.97418 1.19786 0.98267 1.04863 1.01439 1.17272 0.80789 0.79920 0.83456 1.90763 1.78766 1.36973 1.35992 1.45812 1.21170 1.39023 1.31670 1.21000 0.85621 1.01277 0.88017 0.88917 1.21776 0.93547 1.02283 0.98605 1.21504 0.98677 1.01373 0.93175 1.22417 0.86419 1.00682 0.88412 0.90738 1.88441 1.55240 1.37393 1.48951 1.23201 0.85566 0.75566 0.84454 1.93065 1.93591 1.56175 1.76255 1.93065 1.51704 1.94735 1.79387 1.22129 0.93483 1.03276 0.99007 1.21889 0.98922 1.00458 0.95231 1.20415 0.91297 0.97907 0.90072 1.20519 0.95452 0.95016 0.98257 1.21727 0.96160 1.03089 0.95712 1.21968 1.03661 0.95962 0.96215 1.22070 0.82739 0.94683 1.01137 1.43860 1.17561 1.26881 1.21434 0.76445 0.90475 1.17688 1.17890 0.83829 0.76783 0.90133 0.91049 0.90187 0.90275 0.81577 0.90387 0.90361 0.91676 0.90536 0.88145 0.89282 0.91275 0.90121 0.89253 0.90764 0.89356 0.88870 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.96 10.65 -35.23 -0.38 0.59 16 2 C -0.05 0.05 2.98 36.01 0.11 0.15 16 3 Si 0.71 -1.32 31.24 -169.99 -5.31 -6.63 16 4 C 0.04 0.09 6.18 -81.87 -0.51 -0.41 16 5 C -0.18 -0.51 9.09 -37.47 -0.34 -0.85 16 6 C -0.23 -1.02 6.28 -103.48 -0.65 -1.67 16 7 C 0.60 2.86 7.77 -12.59 -0.10 2.76 16 8 O -0.55 -4.04 15.00 5.26 0.08 -3.96 16 9 N -0.73 -1.37 5.07 -54.93 -0.28 -1.65 16 10 C 0.15 0.18 2.45 -67.93 -0.17 0.01 16 11 H 0.09 0.27 7.58 -51.93 -0.39 -0.12 16 12 C -0.12 0.11 5.39 -26.73 -0.14 -0.04 16 13 C -0.11 0.04 5.57 -26.73 -0.15 -0.11 16 14 C 0.08 0.06 2.40 -26.73 -0.06 0.00 16 15 H 0.07 0.07 7.20 -51.93 -0.37 -0.31 16 16 O -0.38 -0.48 10.29 -35.23 -0.36 -0.85 16 17 C 0.40 -0.01 6.26 101.05 0.63 0.62 16 18 F -0.21 -0.34 16.63 2.25 0.04 -0.31 16 19 F -0.21 -0.37 15.46 2.25 0.03 -0.33 16 20 C -0.14 -0.18 5.39 -26.70 -0.14 -0.33 16 21 C -0.13 -0.20 5.50 -26.71 -0.15 -0.34 16 22 C 0.12 0.46 6.57 -81.64 -0.54 -0.07 16 23 C -0.05 -0.13 5.32 -27.53 -0.15 -0.27 16 24 C -0.13 0.00 5.98 -26.44 -0.16 -0.15 16 25 C -0.14 0.14 5.92 -26.58 -0.16 -0.02 16 26 C 0.11 0.02 5.32 -3.70 -0.02 0.00 16 27 N -0.42 -1.11 3.11 -107.38 -0.33 -1.45 16 28 H 0.39 -2.57 8.74 45.56 0.40 -2.17 16 29 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 30 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 31 H -0.25 -0.02 6.88 56.52 0.39 0.37 16 32 H 0.14 0.15 6.38 -52.48 -0.33 -0.19 16 33 H 0.40 -0.01 7.73 -40.82 -0.32 -0.33 16 34 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 37 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.17 -0.65 8.14 -51.93 -0.42 -1.07 16 39 H 0.08 0.14 8.14 -51.93 -0.42 -0.29 16 40 H 0.08 0.15 6.50 -51.93 -0.34 -0.19 16 41 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 42 H 0.08 0.26 8.14 -51.93 -0.42 -0.16 16 43 H 0.10 0.35 7.40 -51.93 -0.38 -0.03 16 44 H 0.09 0.20 8.14 -51.93 -0.42 -0.22 16 45 H 0.07 0.03 8.12 -51.93 -0.42 -0.40 16 46 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 47 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 48 H 0.07 -0.04 8.11 -51.93 -0.42 -0.46 16 49 H 0.09 0.02 8.00 -51.93 -0.42 -0.39 16 50 H 0.09 -0.06 7.69 -51.92 -0.40 -0.46 16 LS Contribution 396.80 15.07 5.98 5.98 Total: 0.00 -9.11 396.80 -10.89 -20.00 By element: Atomic # 1 Polarization: -3.00 SS G_CDS: -7.67 Total: -10.67 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -2.69 Total: -0.73 kcal Atomic # 7 Polarization: -2.48 SS G_CDS: -0.61 Total: -3.10 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -0.66 Total: -4.22 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.07 Total: -0.64 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.31 Total: -6.63 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -9.11 -10.89 -20.00 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -174.116 kcal (2) G-P(sol) polarization free energy of solvation -9.115 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.004 kcal (6) G-S(sol) free energy of system = (1) + (5) -194.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds