Wall clock time and date at job start Sun Mar 7 2021 05:48:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86294 * 109.47230 * 2 1 4 4 C 1.50702 * 109.46673 * 239.99678 * 2 1 3 5 5 C 1.38262 * 119.94900 * 299.99982 * 4 2 1 6 6 C 1.38148 * 120.05536 * 179.97438 * 5 4 2 7 7 C 1.38726 * 119.94828 * 0.02562 * 6 5 4 8 8 O 1.35893 * 120.06152 * 179.97438 * 7 6 5 9 9 C 1.42906 * 117.00465 * 179.97438 * 8 7 6 10 10 C 1.50702 * 109.47022 * 180.02562 * 9 8 7 11 11 O 1.21279 * 120.00201 * 0.02562 * 10 9 8 12 12 N 1.34779 * 119.99614 * 180.02562 * 10 9 8 13 13 C 1.46500 * 119.99793 * 180.02562 * 12 10 9 14 14 H 1.09002 * 109.47092 * 325.00176 * 13 12 10 15 15 C 1.53005 * 109.47094 * 84.99912 * 13 12 10 16 16 C 1.52999 * 109.47159 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47317 * 300.00546 * 16 15 13 18 18 H 1.09002 * 109.47153 * 299.99641 * 17 16 15 19 19 O 1.42896 * 109.46906 * 179.97438 * 17 16 15 20 20 C 1.42896 * 114.00446 * 89.99887 * 19 17 16 21 21 F 1.39903 * 109.46979 * 299.99924 * 20 19 17 22 22 F 1.39905 * 109.47030 * 59.99531 * 20 19 17 23 23 C 1.53000 * 109.47060 * 59.99960 * 17 16 15 24 24 C 1.52997 * 109.47007 * 205.00228 * 13 12 10 25 25 C 1.38740 * 119.88656 * 0.27043 * 7 6 5 26 26 C 1.38150 * 119.94171 * 359.42256 * 25 7 6 27 27 H 0.96698 * 113.99956 * 59.99813 * 1 2 3 28 28 H 1.08999 * 109.47484 * 120.00448 * 2 1 3 29 29 H 1.48492 * 110.00283 * 60.00267 * 3 2 1 30 30 H 1.48501 * 110.00118 * 181.32320 * 3 2 1 31 31 H 1.07997 * 119.96935 * 359.97438 * 5 4 2 32 32 H 1.08004 * 120.02534 * 180.02562 * 6 5 4 33 33 H 1.08996 * 109.46468 * 60.00235 * 9 8 7 34 34 H 1.09002 * 109.47167 * 300.00485 * 9 8 7 35 35 H 0.97004 * 119.99983 * 0.02562 * 12 10 9 36 36 H 1.09000 * 109.47360 * 300.00194 * 15 13 12 37 37 H 1.09002 * 109.46935 * 60.00169 * 15 13 12 38 38 H 1.08996 * 109.46929 * 179.97438 * 16 15 13 39 39 H 1.09002 * 109.46716 * 60.00455 * 16 15 13 40 40 H 1.08998 * 109.47775 * 179.97438 * 20 19 17 41 41 H 1.08992 * 109.47399 * 59.99823 * 23 17 16 42 42 H 1.09004 * 109.46724 * 180.02562 * 23 17 16 43 43 H 1.08993 * 109.47194 * 59.99623 * 24 13 12 44 44 H 1.09002 * 109.46695 * 299.99637 * 24 13 12 45 45 H 1.07997 * 120.02741 * 179.72858 * 25 7 6 46 46 H 1.07997 * 119.97118 * 180.27879 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 -1.2305 5 6 1.5965 -2.0342 -1.4481 6 6 2.0552 -2.6875 -2.5756 7 6 2.8528 -2.0145 -3.4896 8 8 3.3058 -2.6551 -4.5992 9 6 4.1218 -1.8997 -5.4969 10 6 4.5262 -2.7684 -6.6600 11 8 4.1521 -3.9207 -6.7151 12 7 5.3036 -2.2647 -7.6390 13 6 5.6963 -3.1090 -8.7700 14 1 5.8445 -4.1324 -8.4252 15 6 4.5953 -3.0832 -9.8321 16 6 5.0056 -3.9644 -11.0136 17 6 6.3085 -3.4351 -11.6164 18 1 6.1600 -2.4117 -11.9609 19 8 6.6919 -4.2586 -12.7195 20 6 6.1638 -3.8299 -13.9761 21 9 4.7659 -3.8378 -13.9216 22 9 6.6124 -2.5340 -14.2528 23 6 7.4094 -3.4611 -10.5542 24 6 6.9992 -2.5802 -9.3729 25 6 3.1924 -0.6880 -3.2658 26 6 2.7259 -0.0373 -2.1400 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5139 0.8899 29 1 1.5616 2.4678 1.2084 30 1 3.5346 1.7702 -0.0322 31 1 0.9759 -2.5579 -0.7361 32 1 1.7931 -3.7214 -2.7454 33 1 5.0134 -1.5541 -4.9738 34 1 3.5597 -1.0407 -5.8635 35 1 5.6031 -1.3431 -7.5947 36 1 3.6670 -3.4599 -9.4026 37 1 4.4471 -2.0598 -10.1769 38 1 4.2211 -3.9464 -11.7700 39 1 5.1541 -4.9878 -10.6691 40 1 6.5009 -4.5062 -14.7617 41 1 7.5578 -4.4844 -10.2097 42 1 8.3374 -3.0836 -10.9836 43 1 7.7835 -2.5986 -8.6162 44 1 6.8509 -1.5569 -9.7177 45 1 3.8168 -0.1632 -3.9737 46 1 2.9862 0.9965 -1.9677 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:48:22 Heat of formation + Delta-G solvation = -237.302316 kcal Electronic energy + Delta-G solvation = -31233.272525 eV Core-core repulsion = 26338.979940 eV Total energy + Delta-G solvation = -4894.292586 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.147 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -50.07738 -48.19061 -41.63835 -40.95964 -39.92925 -38.99786 -37.71061 -37.09319 -34.92267 -32.43685 -31.95619 -31.74497 -30.79668 -28.81999 -26.41395 -26.10712 -24.18764 -23.92524 -23.26120 -22.32067 -21.64822 -21.20290 -19.50333 -19.40017 -18.85086 -18.65365 -18.42932 -18.06647 -17.45016 -17.33147 -16.88279 -16.51209 -16.21462 -15.92832 -15.83027 -15.61045 -15.54921 -15.20219 -15.03856 -14.91077 -14.64317 -14.61741 -14.43133 -14.31941 -14.24095 -13.77990 -13.71030 -13.56704 -13.44854 -13.43067 -13.26925 -12.83049 -12.45648 -12.25950 -12.23108 -12.07227 -12.05477 -12.00201 -11.72803 -11.55047 -11.13133 -10.97727 -10.40570 -10.19892 -10.04844 -9.22791 -4.98340 0.27098 0.30325 1.34749 1.43025 1.45892 1.65008 1.99422 2.00685 2.57730 2.65511 2.72977 3.45596 3.51276 3.52700 3.56821 3.71237 3.73660 3.80861 3.82809 3.94424 3.95581 3.98287 4.03051 4.04147 4.10921 4.14591 4.28098 4.30584 4.36989 4.42144 4.50570 4.51440 4.66595 4.67869 4.81328 4.96713 4.97031 5.03671 5.05238 5.12413 5.15350 5.19685 5.24955 5.39357 5.49506 5.60111 5.69370 6.26059 6.46666 6.79794 7.12453 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.075 4.075 3 Si 0.783 3.217 4 C -0.161 4.161 5 C -0.061 4.061 6 C -0.167 4.167 7 C 0.121 3.879 8 O -0.321 6.321 9 C 0.036 3.964 10 C 0.512 3.488 11 O -0.572 6.572 12 N -0.705 5.705 13 C 0.145 3.855 14 H 0.067 0.933 15 C -0.121 4.121 16 C -0.139 4.139 17 C 0.076 3.924 18 H 0.079 0.921 19 O -0.390 6.390 20 C 0.398 3.602 21 F -0.220 7.220 22 F -0.218 7.218 23 C -0.109 4.109 24 C -0.113 4.113 25 C -0.199 4.199 26 C -0.076 4.076 27 H 0.395 0.605 28 H 0.102 0.898 29 H -0.304 1.304 30 H -0.280 1.280 31 H 0.132 0.868 32 H 0.125 0.875 33 H 0.127 0.873 34 H 0.129 0.871 35 H 0.423 0.577 36 H 0.051 0.949 37 H 0.083 0.917 38 H 0.070 0.930 39 H 0.064 0.936 40 H 0.206 0.794 41 H 0.070 0.930 42 H 0.089 0.911 43 H 0.094 0.906 44 H 0.094 0.906 45 H 0.166 0.834 46 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.147 7.521 -3.903 9.434 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.184 4.184 3 Si 0.690 3.310 4 C -0.162 4.162 5 C -0.079 4.079 6 C -0.186 4.186 7 C 0.075 3.925 8 O -0.234 6.234 9 C -0.041 4.041 10 C 0.298 3.702 11 O -0.451 6.451 12 N -0.359 5.359 13 C 0.041 3.959 14 H 0.085 0.915 15 C -0.160 4.160 16 C -0.177 4.177 17 C 0.019 3.981 18 H 0.097 0.903 19 O -0.312 6.312 20 C 0.307 3.693 21 F -0.202 7.202 22 F -0.200 7.200 23 C -0.147 4.147 24 C -0.151 4.151 25 C -0.217 4.217 26 C -0.093 4.093 27 H 0.245 0.755 28 H 0.120 0.880 29 H -0.233 1.233 30 H -0.207 1.207 31 H 0.150 0.850 32 H 0.143 0.857 33 H 0.144 0.856 34 H 0.146 0.854 35 H 0.261 0.739 36 H 0.070 0.930 37 H 0.101 0.899 38 H 0.088 0.912 39 H 0.083 0.917 40 H 0.222 0.778 41 H 0.089 0.911 42 H 0.108 0.892 43 H 0.112 0.888 44 H 0.112 0.888 45 H 0.184 0.816 46 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 4.511 6.651 -3.024 8.587 hybrid contribution -0.296 -0.423 0.215 0.559 sum 4.215 6.228 -2.808 8.028 Atomic orbital electron populations 1.86463 1.17531 1.82227 1.50499 1.25204 0.85134 1.11128 0.96936 0.93735 0.77740 0.74826 0.84748 1.20366 1.02082 0.95277 0.98462 1.20892 0.97205 0.94091 0.95734 1.20615 1.01615 1.01236 0.95122 1.19208 0.94645 0.92059 0.86540 1.86129 1.65172 1.40381 1.31727 1.22767 0.97758 0.94257 0.89358 1.20592 0.78214 0.87550 0.83795 1.90772 1.55269 1.20319 1.78707 1.45708 1.51602 1.16896 1.21651 1.21007 0.94528 0.95219 0.85186 0.91465 1.21804 0.98362 1.00960 0.94843 1.22065 0.97214 1.00276 0.98158 1.22467 0.95238 0.94152 0.86232 0.90284 1.88440 1.72466 1.54304 1.15972 1.23835 0.73838 0.81410 0.90223 1.93042 1.33791 1.96662 1.96676 1.93044 1.88949 1.44263 1.93765 1.21519 0.97631 1.01688 0.93905 1.21716 0.95548 1.00487 0.97319 1.21513 1.05664 0.93246 1.01311 1.21078 0.95392 1.00070 0.92771 0.75523 0.88036 1.23254 1.20701 0.85030 0.85718 0.85576 0.85366 0.73903 0.92985 0.89878 0.91182 0.91703 0.77838 0.91086 0.89238 0.88786 0.88750 0.81631 0.82878 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.33 12.77 -148.98 -1.90 -2.23 16 2 C -0.07 0.05 2.82 71.24 0.20 0.25 16 3 Si 0.78 -2.81 29.78 68.60 2.04 -0.77 16 4 C -0.16 0.00 5.39 -19.85 -0.11 -0.11 16 5 C -0.06 -0.18 9.60 22.25 0.21 0.03 16 6 C -0.17 -0.82 9.99 22.37 0.22 -0.60 16 7 C 0.12 0.36 6.69 22.51 0.15 0.51 16 8 O -0.32 -1.74 9.67 -73.31 -0.71 -2.44 16 9 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 10 C 0.51 0.87 7.87 87.66 0.69 1.56 16 11 O -0.57 -7.99 16.16 16.01 0.26 -7.73 16 12 N -0.70 4.04 5.08 -442.52 -2.25 1.80 16 13 C 0.15 -0.40 2.46 44.99 0.11 -0.29 16 14 H 0.07 0.22 7.58 -2.39 -0.02 0.20 16 15 C -0.12 0.09 5.50 30.60 0.17 0.26 16 16 C -0.14 -0.09 5.39 30.59 0.16 0.07 16 17 C 0.08 -0.11 2.40 30.59 0.07 -0.04 16 18 H 0.08 -0.17 7.20 -2.39 -0.02 -0.19 16 19 O -0.39 -0.14 10.29 -148.98 -1.53 -1.67 16 20 C 0.40 -0.97 6.26 113.37 0.71 -0.26 16 21 F -0.22 -0.40 15.46 44.97 0.70 0.29 16 22 F -0.22 -0.15 16.63 44.97 0.75 0.60 16 23 C -0.11 0.50 5.57 30.58 0.17 0.67 16 24 C -0.11 0.91 5.39 30.58 0.16 1.08 16 25 C -0.20 0.66 9.04 22.37 0.20 0.86 16 26 C -0.08 0.26 8.66 22.26 0.19 0.45 16 27 H 0.39 -3.00 8.70 -74.06 -0.64 -3.65 16 28 H 0.10 0.11 7.96 -2.39 -0.02 0.09 16 29 H -0.30 -1.41 7.11 99.48 0.71 -0.71 16 30 H -0.28 -0.02 7.11 99.48 0.71 0.69 16 31 H 0.13 0.31 8.06 -2.91 -0.02 0.29 16 32 H 0.12 0.71 8.06 -2.91 -0.02 0.68 16 33 H 0.13 -1.37 7.65 -2.39 -0.02 -1.39 16 34 H 0.13 -1.43 7.68 -2.39 -0.02 -1.45 16 35 H 0.42 -5.92 8.60 -92.71 -0.80 -6.72 16 36 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 37 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 38 H 0.07 0.18 6.50 -2.39 -0.02 0.16 16 39 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 40 H 0.21 -2.17 8.14 -2.39 -0.02 -2.19 16 41 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 42 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 43 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 44 H 0.09 -1.09 8.14 -2.39 -0.02 -1.11 16 45 H 0.17 -1.82 6.30 -2.91 -0.02 -1.83 16 46 H 0.15 -1.33 4.87 -2.91 -0.01 -1.34 16 Total: 0.00 -28.25 382.60 0.69 -27.57 By element: Atomic # 1 Polarization: -19.72 SS G_CDS: -0.37 Total: -20.09 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: 3.70 Total: 4.68 kcal Atomic # 7 Polarization: 4.04 SS G_CDS: -2.25 Total: 1.80 kcal Atomic # 8 Polarization: -10.19 SS G_CDS: -3.89 Total: -14.07 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 1.44 Total: 0.89 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.04 Total: -0.77 kcal Total: -28.25 0.69 -27.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -209.736 kcal (2) G-P(sol) polarization free energy of solvation -28.252 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -237.988 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.686 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.566 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.302 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds