Wall clock time and date at job start Sun Mar 7 2021 05:49:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.37640 * 125.67586 * 2 1 4 4 C 1.46675 * 126.22572 * 0.24224 * 3 2 1 5 5 O 1.21692 * 119.99795 * 354.32088 * 4 3 2 6 6 N 1.34778 * 120.00079 * 174.31550 * 4 3 2 7 7 C 1.46491 * 119.99906 * 185.08474 * 6 4 3 8 8 H 1.08998 * 109.47394 * 325.00388 * 7 6 4 9 9 C 1.52999 * 109.47128 * 85.00326 * 7 6 4 10 10 C 1.53004 * 109.47398 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.47100 * 299.99946 * 10 9 7 12 12 H 1.08998 * 109.47294 * 300.00012 * 11 10 9 13 13 O 1.42899 * 109.47149 * 179.97438 * 11 10 9 14 14 C 1.42905 * 113.99719 * 89.99889 * 13 11 10 15 15 F 1.39902 * 109.47120 * 300.00391 * 14 13 11 16 16 F 1.39902 * 109.46692 * 59.99996 * 14 13 11 17 17 C 1.52999 * 109.46950 * 59.99780 * 11 10 9 18 18 C 1.53002 * 109.47033 * 205.00065 * 7 6 4 19 19 C 1.37894 * 107.55037 * 179.97438 * 3 2 1 20 20 C 1.39873 * 107.09098 * 0.02562 * 19 3 2 21 21 Br 1.89099 * 126.07328 * 179.97438 * 20 19 3 22 22 C 1.35512 * 107.85543 * 359.97438 * 20 19 3 23 23 C 1.50695 * 125.57354 * 179.97438 * 22 20 19 24 24 O 1.42898 * 109.47363 * 149.97225 * 23 22 20 25 25 Si 1.86305 * 109.47270 * 29.97136 * 23 22 20 26 26 H 1.09001 * 109.47063 * 95.82096 * 1 2 3 27 27 H 1.09000 * 109.47068 * 215.81967 * 1 2 3 28 28 H 1.08998 * 109.47187 * 335.81895 * 1 2 3 29 29 H 0.97000 * 119.99800 * 5.08410 * 6 4 3 30 30 H 1.08999 * 109.47163 * 299.99760 * 9 7 6 31 31 H 1.09003 * 109.47368 * 59.99704 * 9 7 6 32 32 H 1.09000 * 109.47160 * 179.97438 * 10 9 7 33 33 H 1.09003 * 109.46901 * 59.99665 * 10 9 7 34 34 H 1.08996 * 109.46885 * 180.02562 * 14 13 11 35 35 H 1.08999 * 109.47163 * 180.02562 * 17 11 10 36 36 H 1.09003 * 109.47368 * 60.00086 * 17 11 10 37 37 H 1.09003 * 109.47015 * 300.00022 * 18 7 6 38 38 H 1.09000 * 109.47104 * 60.00350 * 18 7 6 39 39 H 1.08000 * 126.45116 * 180.02562 * 19 3 2 40 40 H 1.09004 * 109.47092 * 269.97440 * 23 22 20 41 41 H 0.96698 * 114.00235 * 300.00075 * 24 23 22 42 42 H 1.48505 * 109.99491 * 58.68403 * 25 23 22 43 43 H 1.48494 * 110.00210 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8120 2.5123 0.0050 5 8 0.6258 2.7650 -0.0946 6 7 2.7070 3.5133 0.1200 7 6 2.2454 4.8987 0.2371 8 1 1.3468 5.0344 -0.3646 9 6 1.9302 5.2091 1.7018 10 6 1.4487 6.6562 1.8243 11 6 2.5437 7.6019 1.3268 12 1 3.4423 7.4659 1.9286 13 8 2.0938 8.9534 1.4407 14 6 2.4047 9.5659 2.6938 15 9 1.8032 8.8419 3.7288 16 9 3.7917 9.5757 2.8765 17 6 2.8590 7.2915 -0.1378 18 6 3.3401 5.8448 -0.2605 19 6 3.5782 0.6891 0.0006 20 6 3.5529 -0.7094 0.0003 21 35 5.0610 -1.8503 0.0002 22 6 2.2558 -1.1016 0.0002 23 6 1.7713 -2.5285 -0.0006 24 8 0.5137 -2.6050 0.6736 25 14 3.0125 -3.6063 0.8761 26 1 -0.3633 -0.1042 -1.0224 27 1 -0.3633 -0.8333 0.6014 28 1 -0.3633 0.9375 0.4209 29 1 3.6568 3.3165 0.1252 30 1 1.1504 4.5351 2.0563 31 1 2.8289 5.0734 2.3036 32 1 1.2236 6.8772 2.8677 33 1 0.5501 6.7923 1.2224 34 1 2.0297 10.5893 2.7010 35 1 3.6394 7.9649 -0.4921 36 1 1.9604 7.4276 -0.7397 37 1 4.2388 5.7091 0.3413 38 1 3.5647 5.6237 -1.3039 39 1 4.4582 1.3151 0.0011 40 1 1.6540 -2.8718 -1.0285 41 1 0.5433 -2.3143 1.5954 42 1 3.2051 -3.1291 2.2692 43 1 2.5467 -5.0163 0.8816 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15100670_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:49:28 Heat of formation + Delta-G solvation = -180.376151 kcal Electronic energy + Delta-G solvation = -31132.348193 eV Core-core repulsion = 26282.188529 eV Total energy + Delta-G solvation = -4850.159663 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.053 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -50.07324 -48.18727 -42.93727 -41.01258 -39.76115 -38.08891 -37.70540 -35.19237 -34.47137 -32.49667 -31.95281 -31.33094 -29.95364 -27.43366 -27.06497 -26.15962 -24.04916 -23.70171 -22.79311 -21.50233 -21.40844 -20.61174 -19.40470 -19.02311 -18.74649 -18.64808 -18.29638 -17.46537 -17.23959 -16.68179 -16.33769 -16.06343 -15.75231 -15.68389 -15.55440 -15.32229 -15.08078 -15.00326 -14.62912 -14.59878 -14.55982 -14.41181 -14.24200 -14.09129 -13.74068 -13.71819 -13.46191 -13.27963 -13.19209 -12.87521 -12.78832 -12.47332 -12.43326 -12.23892 -12.05633 -11.99634 -11.67405 -11.54305 -11.22996 -11.08518 -10.84854 -10.24737 -9.89549 -9.36084 -4.70048 0.13168 0.33689 0.88183 1.19576 1.42819 1.55183 1.90539 2.00581 2.11504 2.26021 2.73173 3.01603 3.26640 3.45548 3.52385 3.54988 3.71611 3.74210 3.82016 3.95034 3.99032 4.04711 4.09737 4.15264 4.24494 4.28283 4.32470 4.37575 4.39355 4.48298 4.63837 4.66774 4.68075 4.81986 4.97367 5.03629 5.06282 5.12410 5.18715 5.22872 5.39900 5.56263 5.60747 5.75617 6.19022 6.38443 7.02866 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.390 5.390 3 C -0.058 4.058 4 C 0.591 3.409 5 O -0.576 6.576 6 N -0.698 5.698 7 C 0.148 3.852 8 H 0.075 0.925 9 C -0.120 4.120 10 C -0.137 4.137 11 C 0.075 3.925 12 H 0.077 0.923 13 O -0.389 6.389 14 C 0.398 3.602 15 F -0.220 7.220 16 F -0.218 7.218 17 C -0.108 4.108 18 C -0.115 4.115 19 C -0.090 4.090 20 C -0.190 4.190 21 Br 0.091 6.909 22 C 0.056 3.944 23 C -0.041 4.041 24 O -0.541 6.541 25 Si 0.630 3.370 26 H 0.079 0.921 27 H 0.114 0.886 28 H 0.093 0.907 29 H 0.419 0.581 30 H 0.053 0.947 31 H 0.079 0.921 32 H 0.069 0.931 33 H 0.068 0.932 34 H 0.206 0.794 35 H 0.089 0.911 36 H 0.073 0.927 37 H 0.092 0.908 38 H 0.094 0.906 39 H 0.189 0.811 40 H 0.140 0.860 41 H 0.387 0.613 42 H -0.279 1.279 43 H -0.269 1.269 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.206 2.845 -1.472 6.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.062 5.062 3 C -0.172 4.172 4 C 0.379 3.621 5 O -0.458 6.458 6 N -0.349 5.349 7 C 0.044 3.956 8 H 0.093 0.907 9 C -0.159 4.159 10 C -0.175 4.175 11 C 0.018 3.982 12 H 0.095 0.905 13 O -0.311 6.311 14 C 0.307 3.693 15 F -0.202 7.202 16 F -0.201 7.201 17 C -0.146 4.146 18 C -0.153 4.153 19 C -0.117 4.117 20 C -0.276 4.276 21 Br 0.175 6.825 22 C -0.067 4.067 23 C -0.151 4.151 24 O -0.348 6.348 25 Si 0.532 3.468 26 H 0.098 0.902 27 H 0.133 0.867 28 H 0.112 0.888 29 H 0.257 0.743 30 H 0.072 0.928 31 H 0.098 0.902 32 H 0.088 0.912 33 H 0.086 0.914 34 H 0.222 0.778 35 H 0.107 0.893 36 H 0.092 0.908 37 H 0.110 0.890 38 H 0.112 0.888 39 H 0.207 0.793 40 H 0.157 0.843 41 H 0.237 0.763 42 H -0.204 1.204 43 H -0.195 1.195 Dipole moment (debyes) X Y Z Total from point charges 4.388 1.986 -1.549 5.059 hybrid contribution -1.122 0.287 1.183 1.656 sum 3.266 2.273 -0.366 3.996 Atomic orbital electron populations 1.22662 0.74451 1.06246 1.05042 1.43929 1.07679 1.03904 1.50708 1.20197 0.90442 0.87740 1.18823 1.17001 0.85470 0.83841 0.75775 1.90807 1.17801 1.85033 1.52131 1.45552 1.10296 1.05585 1.73474 1.21046 0.98791 0.79572 0.96226 0.90692 1.21804 1.01921 0.95465 0.96699 1.22055 0.98939 0.94300 1.02255 1.22472 0.96800 0.79555 0.99355 0.90455 1.88442 1.79388 1.29020 1.34209 1.23840 0.73951 0.96391 0.75154 1.93041 1.83536 1.81767 1.61845 1.93044 1.34629 1.97292 1.95094 1.21504 1.03061 0.96717 0.93294 1.21730 0.97717 0.92130 1.03705 1.21523 0.95582 0.92551 1.02002 1.20693 0.90591 0.95011 1.21259 1.96317 1.32607 1.56271 1.97335 1.20998 0.89693 0.90209 1.05780 1.24730 0.93211 0.92696 1.04462 1.86545 1.29904 1.88566 1.29816 0.92697 0.92326 0.77886 0.83922 0.90204 0.86744 0.88850 0.74332 0.92810 0.90226 0.91202 0.91361 0.77833 0.89289 0.90834 0.88976 0.88782 0.79348 0.84274 0.76347 1.20396 1.19515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.11 10.22 127.77 1.31 1.42 16 2 N -0.39 -1.14 3.16 -519.62 -1.64 -2.78 16 3 C -0.06 -0.11 6.88 40.35 0.28 0.17 16 4 C 0.59 1.98 7.73 86.45 0.67 2.64 16 5 O -0.58 -6.10 14.24 -4.32 -0.06 -6.16 16 6 N -0.70 2.46 5.06 -446.52 -2.26 0.20 16 7 C 0.15 -0.41 2.50 44.99 0.11 -0.30 16 8 H 0.07 0.16 7.51 -2.39 -0.02 0.14 16 9 C -0.12 0.14 5.49 30.60 0.17 0.30 16 10 C -0.14 0.00 5.39 30.60 0.17 0.17 16 11 C 0.07 -0.12 2.40 30.59 0.07 -0.05 16 12 H 0.08 -0.16 7.20 -2.39 -0.02 -0.17 16 13 O -0.39 0.01 10.29 -148.98 -1.53 -1.53 16 14 C 0.40 -1.02 6.26 113.37 0.71 -0.31 16 15 F -0.22 -0.36 15.46 44.97 0.70 0.34 16 16 F -0.22 -0.17 16.63 44.97 0.75 0.58 16 17 C -0.11 0.51 5.57 30.58 0.17 0.68 16 18 C -0.12 0.87 5.39 30.58 0.16 1.04 16 19 C -0.09 0.23 10.34 22.58 0.23 0.46 16 20 C -0.19 0.09 6.16 22.04 0.14 0.23 16 21 Br 0.09 -0.28 28.24 -20.37 -0.58 -0.86 16 22 C 0.06 0.08 6.15 41.34 0.25 0.34 16 23 C -0.04 -0.02 2.99 71.23 0.21 0.19 16 24 O -0.54 -0.70 10.11 -148.98 -1.51 -2.21 16 25 Si 0.63 1.42 27.10 68.60 1.86 3.28 16 26 H 0.08 0.16 8.14 -2.39 -0.02 0.14 16 27 H 0.11 -0.09 5.26 -2.39 -0.01 -0.10 16 28 H 0.09 0.45 6.11 -2.39 -0.01 0.44 16 29 H 0.42 -4.10 7.50 -92.71 -0.70 -4.80 16 30 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 31 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 32 H 0.07 0.14 6.50 -2.39 -0.02 0.12 16 33 H 0.07 0.12 8.14 -2.39 -0.02 0.10 16 34 H 0.21 -2.21 8.14 -2.39 -0.02 -2.23 16 35 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 36 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 37 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 38 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 39 H 0.19 -1.85 7.45 -2.91 -0.02 -1.87 16 40 H 0.14 -0.20 7.96 -2.38 -0.02 -0.22 16 41 H 0.39 -1.24 8.32 -74.06 -0.62 -1.86 16 42 H -0.28 -2.00 7.11 99.48 0.71 -1.29 16 43 H -0.27 -2.27 7.11 99.48 0.71 -1.57 16 Total: 0.00 -18.28 365.09 0.18 -18.10 By element: Atomic # 1 Polarization: -15.74 SS G_CDS: -0.19 Total: -15.93 kcal Atomic # 6 Polarization: 2.32 SS G_CDS: 4.65 Total: 6.97 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -3.90 Total: -2.58 kcal Atomic # 8 Polarization: -6.79 SS G_CDS: -3.10 Total: -9.89 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 1.44 Total: 0.91 kcal Atomic # 14 Polarization: 1.42 SS G_CDS: 1.86 Total: 3.28 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.58 Total: -0.86 kcal Total: -18.28 0.18 -18.10 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15100670_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -162.281 kcal (2) G-P(sol) polarization free energy of solvation -18.278 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.559 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.095 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.376 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds