Wall clock time and date at job start Sun Mar 7 2021 01:03:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34230 * 117.00269 * 2 1 4 4 O 1.20831 * 119.99780 * 359.97438 * 3 2 1 5 5 C 1.50694 * 120.00292 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.91126 * 48.74601 * 5 3 2 7 7 C 1.53782 * 113.61805 * 179.97438 * 5 3 2 8 8 C 1.53779 * 87.17449 * 140.02206 * 7 5 3 9 9 C 1.53000 * 113.61380 * 89.16190 * 8 7 5 10 10 N 1.46500 * 109.46756 * 185.10667 * 9 8 7 11 11 C 1.34782 * 119.99685 * 175.75682 * 10 9 8 12 12 O 1.21560 * 119.99900 * 0.02562 * 11 10 9 13 13 C 1.47836 * 120.00198 * 179.97438 * 11 10 9 14 14 C 1.39523 * 120.55777 * 0.02562 * 13 11 10 15 15 N 1.31690 * 120.56952 * 179.97438 * 14 13 11 16 16 C 1.31926 * 121.87836 * 0.02562 * 15 14 13 17 17 C 1.38353 * 121.08189 * 359.97438 * 16 15 14 18 18 C 1.50697 * 120.35262 * 180.02562 * 17 16 15 19 19 O 1.42902 * 109.46858 * 244.99853 * 18 17 16 20 20 Si 1.86299 * 109.46784 * 4.99832 * 18 17 16 21 21 C 1.38366 * 119.29721 * 359.69787 * 17 16 15 22 22 O 1.42902 * 113.61136 * 219.97807 * 8 7 5 23 23 C 1.42905 * 114.00153 * 299.03022 * 22 8 7 24 24 C 1.53778 * 87.08342 * 334.52610 * 8 7 5 25 25 H 1.08995 * 109.46959 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.46913 * 300.00657 * 1 2 3 27 27 H 1.09001 * 109.47130 * 60.00097 * 1 2 3 28 28 H 1.09000 * 113.61425 * 25.42851 * 7 5 3 29 29 H 1.08996 * 113.61498 * 254.61813 * 7 5 3 30 30 H 1.08999 * 109.46820 * 305.10662 * 9 8 7 31 31 H 1.08997 * 109.47014 * 65.10981 * 9 8 7 32 32 H 0.96993 * 120.00154 * 355.75827 * 10 9 8 33 33 H 1.08000 * 119.71754 * 0.02562 * 14 13 11 34 34 H 1.08002 * 119.45981 * 180.02562 * 16 15 14 35 35 H 1.09002 * 109.47205 * 124.99743 * 18 17 16 36 36 H 0.96704 * 113.99427 * 180.02562 * 19 18 17 37 37 H 1.48500 * 110.00199 * 299.99846 * 20 18 17 38 38 H 1.48501 * 110.00256 * 61.32204 * 20 18 17 39 39 H 1.08002 * 120.85360 * 180.29472 * 21 17 16 40 40 H 1.08994 * 109.46699 * 183.27634 * 23 22 8 41 41 H 1.08996 * 109.47337 * 303.27724 * 23 22 8 42 42 H 1.08998 * 109.46547 * 63.27697 * 23 22 8 43 43 H 1.09000 * 113.61781 * 139.97841 * 24 8 7 44 44 H 1.09000 * 113.61823 * 270.80375 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0244 0.6361 -0.7557 7 6 4.1078 2.7142 -0.0011 8 6 5.1831 2.2290 0.9854 9 6 6.4462 1.6994 0.3035 10 7 7.3539 1.1520 1.3148 11 6 8.4987 0.5490 0.9370 12 8 8.7781 0.4599 -0.2427 13 6 9.4151 -0.0029 1.9574 14 6 9.1062 0.0934 3.3146 15 7 9.9221 -0.3986 4.2237 16 6 11.0520 -0.9955 3.8959 17 6 11.4301 -1.1313 2.5720 18 6 12.7242 -1.8166 2.2160 19 8 13.6102 -0.8749 1.6075 20 14 13.5100 -2.5003 3.7607 21 6 10.6042 -0.6372 1.5779 22 8 5.4660 3.1635 2.0288 23 6 5.9621 4.4207 1.5644 24 6 4.1947 1.1256 1.3981 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 3.4175 3.4405 0.4278 29 1 4.5092 3.0293 -0.9643 30 1 6.1756 0.9158 -0.4042 31 1 6.9411 2.5129 -0.2267 32 1 7.1312 1.2234 2.2561 33 1 8.1897 0.5749 3.6223 34 1 11.6919 -1.3853 4.6737 35 1 12.5245 -2.6306 1.5191 36 1 14.4649 -1.2478 1.3514 37 1 13.7872 -1.4004 4.7191 38 1 12.6120 -3.5044 4.3857 39 1 10.8724 -0.7337 0.5361 40 1 6.2069 5.0524 2.4182 41 1 6.8571 4.2587 0.9638 42 1 5.2005 4.9098 0.9570 43 1 4.6660 0.1569 1.5640 44 1 3.5290 1.4171 2.2105 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_13287814.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:03:03 Heat of formation + Delta-G solvation = -116.536172 kcal Electronic energy + Delta-G solvation = -29070.077887 eV Core-core repulsion = 24763.133441 eV Total energy + Delta-G solvation = -4306.944446 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.32988 -41.82326 -40.81951 -39.90400 -37.92769 -37.67821 -36.88375 -35.64741 -33.88018 -33.29756 -30.02723 -28.66430 -28.29526 -27.32919 -26.88065 -26.05502 -24.94634 -23.73786 -22.14834 -21.55559 -20.31493 -19.31290 -18.95953 -18.62387 -18.20441 -18.14279 -17.90438 -17.50090 -16.90632 -16.77316 -16.49123 -16.40636 -16.12486 -15.91612 -15.61969 -15.35098 -15.00417 -14.74612 -14.53490 -14.33233 -14.29281 -14.20649 -13.99447 -13.80114 -13.59224 -13.33443 -13.05735 -12.84835 -12.74679 -12.64901 -12.20814 -12.17539 -11.82376 -11.62574 -11.49072 -11.41691 -11.05489 -10.82392 -10.73219 -10.52569 -10.32942 -10.20414 -5.11927 -0.61375 -0.03715 1.08496 1.10175 1.51624 1.61127 1.67496 1.77673 1.82070 2.53472 2.57621 2.96390 3.00509 3.11357 3.16853 3.22563 3.24807 3.47707 3.62220 3.66102 3.73059 3.82586 3.93781 4.01193 4.13139 4.15255 4.16446 4.21337 4.24348 4.34423 4.36462 4.41885 4.46442 4.47480 4.56518 4.59197 4.70936 4.73703 4.80451 4.87536 4.90452 5.13557 5.27088 5.33329 5.94090 6.26904 6.47041 6.59078 6.67574 7.00029 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.110 4.110 6 H 0.132 0.868 7 C -0.134 4.134 8 C 0.075 3.925 9 C 0.117 3.883 10 N -0.717 5.717 11 C 0.567 3.433 12 O -0.528 6.528 13 C -0.187 4.187 14 C 0.140 3.860 15 N -0.476 5.476 16 C 0.124 3.876 17 C -0.133 4.133 18 C -0.069 4.069 19 O -0.544 6.544 20 Si 0.686 3.314 21 C 0.015 3.985 22 O -0.365 6.365 23 C 0.026 3.974 24 C -0.101 4.101 25 H 0.104 0.896 26 H 0.064 0.936 27 H 0.064 0.936 28 H 0.114 0.886 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.079 0.921 32 H 0.407 0.593 33 H 0.164 0.836 34 H 0.155 0.845 35 H 0.081 0.919 36 H 0.386 0.614 37 H -0.246 1.246 38 H -0.250 1.250 39 H 0.154 0.846 40 H 0.091 0.909 41 H 0.045 0.955 42 H 0.048 0.952 43 H 0.094 0.906 44 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.980 -3.198 -0.068 3.763 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.172 4.172 8 C 0.034 3.966 9 C -0.007 4.007 10 N -0.371 5.371 11 C 0.353 3.647 12 O -0.405 6.405 13 C -0.192 4.192 14 C -0.019 4.019 15 N -0.184 5.184 16 C -0.032 4.032 17 C -0.135 4.135 18 C -0.181 4.181 19 O -0.351 6.351 20 Si 0.586 3.414 21 C -0.011 4.011 22 O -0.283 6.283 23 C -0.070 4.070 24 C -0.138 4.138 25 H 0.122 0.878 26 H 0.083 0.917 27 H 0.083 0.917 28 H 0.132 0.868 29 H 0.107 0.893 30 H 0.108 0.892 31 H 0.097 0.903 32 H 0.243 0.757 33 H 0.181 0.819 34 H 0.171 0.829 35 H 0.099 0.901 36 H 0.235 0.765 37 H -0.170 1.170 38 H -0.174 1.174 39 H 0.172 0.828 40 H 0.109 0.891 41 H 0.064 0.936 42 H 0.067 0.933 43 H 0.112 0.888 44 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 1.094 -2.620 1.136 3.058 hybrid contribution -0.575 0.339 -1.058 1.251 sum 0.519 -2.281 0.078 2.341 Atomic orbital electron populations 1.23339 0.75776 1.04087 1.02776 1.86513 1.23839 1.33145 1.83766 1.23328 0.91370 0.81514 0.72243 1.90697 1.66871 1.36425 1.44840 1.22384 0.88198 1.00903 1.01466 0.84993 1.23562 0.97304 0.95419 1.00913 1.23069 0.92307 0.91446 0.89733 1.21620 0.88739 0.99480 0.90897 1.45666 1.21131 1.59236 1.11019 1.17952 0.80827 0.77824 0.88055 1.90825 1.74333 1.57593 1.17742 1.20990 0.97971 1.05216 0.95022 1.23073 0.97767 0.93231 0.87793 1.67718 1.03743 1.09316 1.37602 1.22735 0.93178 0.93207 0.94113 1.20406 0.96914 1.02043 0.94181 1.24603 0.90513 0.94540 1.08399 1.86495 1.29306 1.37281 1.82034 0.94895 0.88578 0.81647 0.76277 1.21613 0.89691 0.88760 1.01080 1.87957 1.85237 1.24223 1.30912 1.22820 0.98140 0.84889 1.01195 1.23078 0.96634 0.98807 0.95319 0.87772 0.91684 0.91686 0.86803 0.89308 0.89232 0.90274 0.75677 0.81883 0.82865 0.90104 0.76535 1.17013 1.17421 0.82831 0.89103 0.93630 0.93330 0.88774 0.87772 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.39 10.57 -39.26 -0.41 -0.81 16 3 C 0.47 0.68 7.49 36.00 0.27 0.95 16 4 O -0.50 -2.18 15.65 -18.75 -0.29 -2.47 16 5 C -0.11 0.16 3.92 -90.82 -0.36 -0.19 16 6 H 0.13 -0.42 7.62 -51.93 -0.40 -0.82 16 7 C -0.13 0.20 5.78 -25.92 -0.15 0.05 16 8 C 0.07 -0.13 0.87 -89.81 -0.08 -0.21 16 9 C 0.12 -0.15 4.74 -4.04 -0.02 -0.17 16 10 N -0.72 0.54 5.43 -61.25 -0.33 0.20 16 11 C 0.57 1.14 7.78 -12.33 -0.10 1.05 16 12 O -0.53 -2.82 16.42 5.31 0.09 -2.73 16 13 C -0.19 -0.31 5.89 -104.83 -0.62 -0.93 16 14 C 0.14 0.13 10.71 -17.13 -0.18 -0.06 16 15 N -0.48 -1.35 10.35 -12.91 -0.13 -1.49 16 16 C 0.12 0.29 9.84 -17.47 -0.17 0.11 16 17 C -0.13 -0.22 5.38 -104.53 -0.56 -0.78 16 18 C -0.07 0.07 2.81 36.00 0.10 0.17 16 19 O -0.54 0.31 12.82 -35.23 -0.45 -0.14 16 20 Si 0.69 -1.52 29.88 -169.99 -5.08 -6.60 16 21 C 0.01 0.03 9.38 -38.87 -0.36 -0.33 16 22 O -0.36 0.19 10.22 -35.23 -0.36 -0.17 16 23 C 0.03 -0.04 10.62 101.05 1.07 1.03 16 24 C -0.10 0.21 7.06 -25.77 -0.18 0.02 16 25 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 26 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 28 H 0.11 0.01 7.41 -51.93 -0.38 -0.38 16 29 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 30 H 0.09 -0.14 7.32 -51.93 -0.38 -0.52 16 31 H 0.08 -0.07 7.30 -51.93 -0.38 -0.45 16 32 H 0.41 -0.93 6.26 -40.82 -0.26 -1.19 16 33 H 0.16 -0.36 6.42 -52.49 -0.34 -0.69 16 34 H 0.15 0.19 4.87 -52.49 -0.26 -0.06 16 35 H 0.08 -0.22 7.96 -51.93 -0.41 -0.64 16 36 H 0.39 -2.19 8.74 45.56 0.40 -1.79 16 37 H -0.25 -0.20 7.05 56.52 0.40 0.20 16 38 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 39 H 0.15 0.31 7.74 -52.49 -0.41 -0.09 16 40 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.05 -0.08 7.02 -51.93 -0.36 -0.45 16 42 H 0.05 -0.10 7.50 -51.93 -0.39 -0.49 16 43 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 44 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 LS Contribution 371.36 15.07 5.60 5.60 Total: 0.00 -10.67 371.36 -7.37 -18.04 By element: Atomic # 1 Polarization: -5.47 SS G_CDS: -5.72 Total: -11.18 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -0.27 Total: 1.75 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: -0.47 Total: -1.28 kcal Atomic # 8 Polarization: -4.89 SS G_CDS: -1.43 Total: -6.32 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.08 Total: -6.60 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.67 -7.37 -18.04 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_13287814.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.499 kcal (2) G-P(sol) polarization free energy of solvation -10.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.037 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.536 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds