Wall clock time and date at job start Sun Mar 7 2021 01:03:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34230 * 117.00269 * 2 1 4 4 O 1.20831 * 119.99780 * 359.97438 * 3 2 1 5 5 C 1.50694 * 120.00292 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.91126 * 48.74601 * 5 3 2 7 7 C 1.53782 * 113.61805 * 179.97438 * 5 3 2 8 8 C 1.53779 * 87.17449 * 140.02206 * 7 5 3 9 9 C 1.53000 * 113.61380 * 89.16190 * 8 7 5 10 10 N 1.46500 * 109.46756 * 185.10667 * 9 8 7 11 11 C 1.34782 * 119.99685 * 175.75682 * 10 9 8 12 12 O 1.21560 * 119.99900 * 0.02562 * 11 10 9 13 13 C 1.47836 * 120.00198 * 179.97438 * 11 10 9 14 14 C 1.39523 * 120.55777 * 0.02562 * 13 11 10 15 15 N 1.31690 * 120.56952 * 179.97438 * 14 13 11 16 16 C 1.31926 * 121.87836 * 0.02562 * 15 14 13 17 17 C 1.38353 * 121.08189 * 359.97438 * 16 15 14 18 18 C 1.50697 * 120.35262 * 180.02562 * 17 16 15 19 19 O 1.42902 * 109.46858 * 244.99853 * 18 17 16 20 20 Si 1.86299 * 109.46784 * 4.99832 * 18 17 16 21 21 C 1.38366 * 119.29721 * 359.69787 * 17 16 15 22 22 O 1.42902 * 113.61136 * 219.97807 * 8 7 5 23 23 C 1.42905 * 114.00153 * 299.03022 * 22 8 7 24 24 C 1.53778 * 87.08342 * 334.52610 * 8 7 5 25 25 H 1.08995 * 109.46959 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.46913 * 300.00657 * 1 2 3 27 27 H 1.09001 * 109.47130 * 60.00097 * 1 2 3 28 28 H 1.09000 * 113.61425 * 25.42851 * 7 5 3 29 29 H 1.08996 * 113.61498 * 254.61813 * 7 5 3 30 30 H 1.08999 * 109.46820 * 305.10662 * 9 8 7 31 31 H 1.08997 * 109.47014 * 65.10981 * 9 8 7 32 32 H 0.96993 * 120.00154 * 355.75827 * 10 9 8 33 33 H 1.08000 * 119.71754 * 0.02562 * 14 13 11 34 34 H 1.08002 * 119.45981 * 180.02562 * 16 15 14 35 35 H 1.09002 * 109.47205 * 124.99743 * 18 17 16 36 36 H 0.96704 * 113.99427 * 180.02562 * 19 18 17 37 37 H 1.48500 * 110.00199 * 299.99846 * 20 18 17 38 38 H 1.48501 * 110.00256 * 61.32204 * 20 18 17 39 39 H 1.08002 * 120.85360 * 180.29472 * 21 17 16 40 40 H 1.08994 * 109.46699 * 183.27634 * 23 22 8 41 41 H 1.08996 * 109.47337 * 303.27724 * 23 22 8 42 42 H 1.08998 * 109.46547 * 63.27697 * 23 22 8 43 43 H 1.09000 * 113.61781 * 139.97841 * 24 8 7 44 44 H 1.09000 * 113.61823 * 270.80375 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0244 0.6361 -0.7557 7 6 4.1078 2.7142 -0.0011 8 6 5.1831 2.2290 0.9854 9 6 6.4462 1.6994 0.3035 10 7 7.3539 1.1520 1.3148 11 6 8.4987 0.5490 0.9370 12 8 8.7781 0.4599 -0.2427 13 6 9.4151 -0.0029 1.9574 14 6 9.1062 0.0934 3.3146 15 7 9.9221 -0.3986 4.2237 16 6 11.0520 -0.9955 3.8959 17 6 11.4301 -1.1313 2.5720 18 6 12.7242 -1.8166 2.2160 19 8 13.6102 -0.8749 1.6075 20 14 13.5100 -2.5003 3.7607 21 6 10.6042 -0.6372 1.5779 22 8 5.4660 3.1635 2.0288 23 6 5.9621 4.4207 1.5644 24 6 4.1947 1.1256 1.3981 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 3.4175 3.4405 0.4278 29 1 4.5092 3.0293 -0.9643 30 1 6.1756 0.9158 -0.4042 31 1 6.9411 2.5129 -0.2267 32 1 7.1312 1.2234 2.2561 33 1 8.1897 0.5749 3.6223 34 1 11.6919 -1.3853 4.6737 35 1 12.5245 -2.6306 1.5191 36 1 14.4649 -1.2478 1.3514 37 1 13.7872 -1.4004 4.7191 38 1 12.6120 -3.5044 4.3857 39 1 10.8724 -0.7337 0.5361 40 1 6.2069 5.0524 2.4182 41 1 6.8571 4.2587 0.9638 42 1 5.2005 4.9098 0.9570 43 1 4.6660 0.1569 1.5640 44 1 3.5290 1.4171 2.2105 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15102698_13287814.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:03:02 Heat of formation + Delta-G solvation = -120.401313 kcal Electronic energy + Delta-G solvation = -29070.245492 eV Core-core repulsion = 24763.133441 eV Total energy + Delta-G solvation = -4307.112051 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.33308 -41.91266 -40.86259 -40.00292 -37.84737 -37.73469 -36.86493 -35.72824 -33.96766 -33.36724 -30.00570 -28.63576 -28.17812 -27.32516 -26.77725 -26.03832 -24.98164 -23.79434 -22.15466 -21.63403 -20.26113 -19.31189 -19.00922 -18.54074 -18.26703 -18.21882 -17.92715 -17.53495 -16.89931 -16.78257 -16.47823 -16.43225 -16.07906 -15.86633 -15.58130 -15.31119 -15.04852 -14.78070 -14.55198 -14.41258 -14.34235 -14.26277 -13.95818 -13.79215 -13.51642 -13.25533 -12.96807 -12.77951 -12.68377 -12.63148 -12.17969 -12.08236 -11.88475 -11.61199 -11.58818 -11.44992 -11.18234 -10.84818 -10.71549 -10.59892 -10.30580 -10.20025 -4.96490 -0.72632 -0.13669 1.00248 1.23413 1.53658 1.64016 1.65168 1.76638 1.92887 2.48708 2.62968 2.94167 3.10853 3.18941 3.22703 3.31520 3.35736 3.42856 3.58188 3.63481 3.73512 3.86773 4.00906 4.09118 4.15225 4.23483 4.25632 4.27658 4.36994 4.44914 4.48967 4.53476 4.58566 4.61377 4.66567 4.71963 4.75294 4.79554 4.84243 4.88413 5.00147 5.13045 5.20256 5.29229 6.05351 6.25429 6.48344 6.59928 6.86190 6.92298 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.361 6.361 3 C 0.472 3.528 4 O -0.537 6.537 5 C -0.108 4.108 6 H 0.154 0.846 7 C -0.134 4.134 8 C 0.084 3.916 9 C 0.117 3.883 10 N -0.703 5.703 11 C 0.570 3.430 12 O -0.565 6.565 13 C -0.191 4.191 14 C 0.143 3.857 15 N -0.497 5.497 16 C 0.109 3.891 17 C -0.141 4.141 18 C -0.079 4.079 19 O -0.564 6.564 20 Si 0.779 3.221 21 C 0.004 3.996 22 O -0.377 6.377 23 C 0.022 3.978 24 C -0.097 4.097 25 H 0.129 0.871 26 H 0.061 0.939 27 H 0.061 0.939 28 H 0.097 0.903 29 H 0.100 0.900 30 H 0.097 0.903 31 H 0.077 0.923 32 H 0.415 0.585 33 H 0.192 0.808 34 H 0.157 0.843 35 H 0.102 0.898 36 H 0.407 0.593 37 H -0.290 1.290 38 H -0.281 1.281 39 H 0.151 0.849 40 H 0.095 0.905 41 H 0.048 0.952 42 H 0.050 0.950 43 H 0.109 0.891 44 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.331 -3.888 -0.241 4.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.277 6.277 3 C 0.316 3.684 4 O -0.427 6.427 5 C -0.126 4.126 6 H 0.172 0.828 7 C -0.172 4.172 8 C 0.043 3.957 9 C -0.007 4.007 10 N -0.355 5.355 11 C 0.357 3.643 12 O -0.445 6.445 13 C -0.196 4.196 14 C -0.015 4.015 15 N -0.205 5.205 16 C -0.047 4.047 17 C -0.143 4.143 18 C -0.189 4.189 19 O -0.375 6.375 20 Si 0.683 3.317 21 C -0.023 4.023 22 O -0.295 6.295 23 C -0.074 4.074 24 C -0.134 4.134 25 H 0.147 0.853 26 H 0.080 0.920 27 H 0.080 0.920 28 H 0.115 0.885 29 H 0.119 0.881 30 H 0.115 0.885 31 H 0.095 0.905 32 H 0.254 0.746 33 H 0.209 0.791 34 H 0.174 0.826 35 H 0.120 0.880 36 H 0.259 0.741 37 H -0.217 1.217 38 H -0.208 1.208 39 H 0.169 0.831 40 H 0.114 0.886 41 H 0.066 0.934 42 H 0.069 0.931 43 H 0.127 0.873 44 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 1.448 -3.321 0.957 3.747 hybrid contribution -0.737 0.585 -0.975 1.355 sum 0.711 -2.737 -0.018 2.828 Atomic orbital electron populations 1.23536 0.74981 1.05654 1.02462 1.86516 1.24788 1.32990 1.83442 1.23891 0.92399 0.81060 0.71030 1.90680 1.67859 1.37481 1.46635 1.22530 0.86321 1.01301 1.02483 0.82834 1.23523 0.97001 0.95169 1.01479 1.22965 0.91966 0.91298 0.89427 1.21679 0.88570 0.99618 0.90829 1.45579 1.20262 1.57937 1.11715 1.17974 0.81236 0.77646 0.87461 1.90806 1.75272 1.59339 1.19096 1.21044 0.97922 1.05271 0.95344 1.23455 0.98266 0.92599 0.87207 1.67727 1.04306 1.10028 1.38424 1.22910 0.93450 0.93665 0.94650 1.20700 0.98007 1.01847 0.93752 1.24813 0.89621 0.94580 1.09858 1.86441 1.30735 1.38155 1.82176 0.93899 0.86269 0.78068 0.73451 1.21726 0.90188 0.89231 1.01125 1.87940 1.85351 1.24709 1.31546 1.22895 0.98280 0.84637 1.01541 1.23073 0.96266 0.99397 0.94671 0.85300 0.92039 0.92026 0.88481 0.88138 0.88513 0.90514 0.74632 0.79125 0.82624 0.88047 0.74059 1.21709 1.20775 0.83132 0.88608 0.93378 0.93117 0.87283 0.88560 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.79 10.57 -51.42 -0.54 -1.33 16 3 C 0.47 1.53 7.49 71.23 0.53 2.06 16 4 O -0.54 -5.26 15.65 21.95 0.34 -4.92 16 5 C -0.11 0.37 3.92 -10.92 -0.04 0.32 16 6 H 0.15 -1.20 7.62 -2.39 -0.02 -1.21 16 7 C -0.13 0.41 5.78 31.12 0.18 0.59 16 8 C 0.08 -0.34 0.87 -10.27 -0.01 -0.35 16 9 C 0.12 -0.40 4.74 86.38 0.41 0.01 16 10 N -0.70 1.55 5.43 -465.97 -2.53 -0.98 16 11 C 0.57 2.26 7.78 86.78 0.68 2.94 16 12 O -0.57 -6.25 16.42 -3.90 -0.06 -6.32 16 13 C -0.19 -0.67 5.89 -20.00 -0.12 -0.79 16 14 C 0.14 0.23 10.71 85.02 0.91 1.14 16 15 N -0.50 -2.99 10.35 -194.75 -2.01 -5.01 16 16 C 0.11 0.58 9.84 84.71 0.83 1.41 16 17 C -0.14 -0.53 5.38 -19.81 -0.11 -0.63 16 18 C -0.08 0.18 2.81 71.24 0.20 0.38 16 19 O -0.56 0.87 12.82 -148.98 -1.91 -1.04 16 20 Si 0.78 -3.46 29.88 68.60 2.05 -1.41 16 21 C 0.00 0.02 9.38 22.73 0.21 0.23 16 22 O -0.38 0.53 10.22 -148.98 -1.52 -0.99 16 23 C 0.02 -0.08 10.62 113.37 1.20 1.13 16 24 C -0.10 0.46 7.06 31.21 0.22 0.68 16 25 H 0.13 -0.88 8.14 -2.39 -0.02 -0.90 16 26 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 27 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 28 H 0.10 0.10 7.41 -2.39 -0.02 0.08 16 29 H 0.10 -0.56 8.10 -2.39 -0.02 -0.58 16 30 H 0.10 -0.41 7.32 -2.39 -0.02 -0.43 16 31 H 0.08 -0.17 7.30 -2.39 -0.02 -0.19 16 32 H 0.42 -2.37 6.26 -92.71 -0.58 -2.95 16 33 H 0.19 -1.04 6.42 -2.91 -0.02 -1.06 16 34 H 0.16 0.56 4.87 -2.91 -0.01 0.55 16 35 H 0.10 -0.66 7.96 -2.39 -0.02 -0.68 16 36 H 0.41 -5.00 8.74 -74.05 -0.65 -5.65 16 37 H -0.29 -0.79 7.05 99.48 0.70 -0.08 16 38 H -0.28 -0.17 7.11 99.48 0.71 0.54 16 39 H 0.15 0.76 7.74 -2.91 -0.02 0.73 16 40 H 0.10 -0.44 8.14 -2.39 -0.02 -0.46 16 41 H 0.05 -0.19 7.02 -2.39 -0.02 -0.21 16 42 H 0.05 -0.20 7.50 -2.39 -0.02 -0.21 16 43 H 0.11 -0.83 8.10 -2.39 -0.02 -0.85 16 44 H 0.10 -0.26 8.10 -2.39 -0.02 -0.28 16 Total: 0.00 -25.63 371.36 -0.03 -25.65 By element: Atomic # 1 Polarization: -13.82 SS G_CDS: -0.14 Total: -13.96 kcal Atomic # 6 Polarization: 3.99 SS G_CDS: 6.30 Total: 10.29 kcal Atomic # 7 Polarization: -1.44 SS G_CDS: -4.54 Total: -5.99 kcal Atomic # 8 Polarization: -10.90 SS G_CDS: -3.70 Total: -14.59 kcal Atomic # 14 Polarization: -3.46 SS G_CDS: 2.05 Total: -1.41 kcal Total: -25.63 -0.03 -25.65 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_13287814.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.747 kcal (2) G-P(sol) polarization free energy of solvation -25.629 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.654 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.401 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds