Wall clock time and date at job start Sun Mar 7 2021 01:03:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34232 * 117.00147 * 2 1 4 4 O 1.20821 * 119.99838 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00003 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.90658 * 48.74408 * 5 3 2 7 7 C 1.53779 * 113.61774 * 179.97438 * 5 3 2 8 8 C 1.53771 * 87.08117 * 139.97954 * 7 5 3 9 9 C 1.52999 * 113.61386 * 89.12006 * 8 7 5 10 10 N 1.46504 * 109.47380 * 70.57112 * 9 8 7 11 11 C 1.34771 * 120.00364 * 175.16503 * 10 9 8 12 12 O 1.21613 * 120.00123 * 359.97438 * 11 10 9 13 13 C 1.47381 * 120.00367 * 179.97438 * 11 10 9 14 14 C 1.36417 * 127.18805 * 0.02562 * 13 11 10 15 15 O 1.33648 * 108.39451 * 180.02562 * 14 13 11 16 16 C 1.34216 * 110.91347 * 359.97438 * 15 14 13 17 17 C 1.50691 * 125.44061 * 180.02562 * 16 15 14 18 18 O 1.42896 * 109.47317 * 244.97440 * 17 16 15 19 19 Si 1.86305 * 109.47367 * 4.97899 * 17 16 15 20 20 C 1.34181 * 109.11904 * 359.71021 * 16 15 14 21 21 O 1.42902 * 113.61791 * 219.93442 * 8 7 5 22 22 C 1.42900 * 114.00285 * 163.35647 * 21 8 7 23 23 C 1.53778 * 87.17761 * 334.52849 * 8 7 5 24 24 H 1.08995 * 109.47230 * 300.00489 * 1 2 3 25 25 H 1.09009 * 109.46722 * 60.00297 * 1 2 3 26 26 H 1.08991 * 109.47373 * 180.02562 * 1 2 3 27 27 H 1.09003 * 113.60879 * 25.42890 * 7 5 3 28 28 H 1.08998 * 113.69289 * 254.54366 * 7 5 3 29 29 H 1.08997 * 109.47282 * 310.57163 * 9 8 7 30 30 H 1.09003 * 109.47726 * 190.56869 * 9 8 7 31 31 H 0.96999 * 120.00030 * 355.15493 * 10 9 8 32 32 H 1.07999 * 125.80560 * 0.02562 * 14 13 11 33 33 H 1.09005 * 109.47054 * 124.98243 * 17 16 15 34 34 H 0.96703 * 113.99569 * 60.00572 * 18 17 16 35 35 H 1.48494 * 110.00026 * 179.97438 * 19 17 16 36 36 H 1.48498 * 109.99669 * 301.32018 * 19 17 16 37 37 H 1.08002 * 127.02519 * 180.26672 * 20 16 15 38 38 H 1.08998 * 109.47208 * 56.33495 * 22 21 8 39 39 H 1.09001 * 109.47026 * 176.33442 * 22 21 8 40 40 H 1.08997 * 109.46721 * 296.33615 * 22 21 8 41 41 H 1.08997 * 113.61450 * 140.02340 * 23 8 7 42 42 H 1.08997 * 113.61394 * 270.92669 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0250 0.6357 -0.7539 7 6 4.1079 2.7141 -0.0001 8 6 5.1806 2.2273 0.9882 9 6 6.4439 1.6953 0.3085 10 7 7.1808 2.8094 -0.2932 11 6 8.3816 2.5924 -0.8653 12 8 8.8538 1.4718 -0.8817 13 6 9.1227 3.7131 -1.4711 14 6 8.7350 5.0194 -1.5348 15 8 9.6888 5.7122 -2.1644 16 6 10.7041 4.9116 -2.5243 17 6 11.9484 5.3516 -3.2515 18 8 11.9874 4.7397 -4.5423 19 14 11.9335 7.2047 -3.4428 20 6 10.4373 3.6580 -2.1271 21 8 5.4636 3.1615 2.0319 22 6 6.1569 2.5958 3.1461 23 6 4.1918 1.1241 1.4003 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8901 26 1 -0.3633 -1.0276 0.0005 27 1 3.4172 3.4406 0.4280 28 1 4.5115 3.0298 -0.9622 29 1 6.1661 0.9822 -0.4676 30 1 7.0736 1.2006 1.0480 31 1 6.8045 3.7033 -0.2800 32 1 7.8138 5.4249 -1.1431 33 1 12.8277 5.0522 -2.6810 34 1 11.2338 4.9624 -5.1059 35 1 13.1559 7.6513 -4.1579 36 1 10.7231 7.6282 -4.1915 37 1 11.0596 2.7859 -2.2643 38 1 7.0807 2.1312 2.8014 39 1 6.3914 3.3811 3.8648 40 1 5.5275 1.8439 3.6219 41 1 4.6630 0.1556 1.5676 42 1 3.5241 1.4167 2.2106 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_13456056.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:03:38 Heat of formation + Delta-G solvation = -139.555476 kcal Electronic energy + Delta-G solvation = -27737.112236 eV Core-core repulsion = 23459.677076 eV Total energy + Delta-G solvation = -4277.435159 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.134 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -43.73680 -42.27259 -40.92501 -39.94701 -38.16278 -37.69669 -36.87867 -35.48466 -33.94701 -31.97506 -29.96759 -28.64344 -28.23836 -27.01657 -26.62581 -25.78689 -24.29626 -22.30198 -22.11648 -20.97366 -20.23163 -19.49353 -19.12436 -18.19197 -17.88360 -17.59062 -17.51795 -17.41513 -17.07254 -16.78638 -16.39393 -16.31036 -16.07876 -15.85480 -15.75162 -15.41557 -14.61511 -14.54133 -14.30587 -14.17047 -13.93929 -13.92723 -13.69363 -13.57548 -13.33942 -13.15124 -12.96905 -12.77766 -12.71304 -12.21677 -12.09294 -11.83120 -11.61393 -11.49426 -11.16077 -10.92491 -10.80385 -10.73063 -10.23702 -9.83549 -5.01396 0.21339 0.87437 1.08544 1.10482 1.46067 1.58424 1.70156 1.87914 1.91911 2.32108 2.58295 3.01808 3.06822 3.12185 3.20661 3.28898 3.37878 3.56374 3.79915 3.90457 3.93426 4.12429 4.15548 4.20188 4.21049 4.28061 4.32120 4.35924 4.41482 4.43442 4.49184 4.56285 4.56977 4.65942 4.69062 4.73254 4.78518 4.92828 5.17862 5.24284 5.32773 5.80913 5.95567 6.21151 6.37306 6.67056 7.14431 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.110 4.110 6 H 0.132 0.868 7 C -0.100 4.100 8 C 0.076 3.924 9 C 0.116 3.884 10 N -0.721 5.721 11 C 0.589 3.411 12 O -0.532 6.532 13 C -0.238 4.238 14 C 0.035 3.965 15 O -0.166 6.166 16 C -0.057 4.057 17 C -0.035 4.035 18 O -0.520 6.520 19 Si 0.704 3.296 20 C -0.122 4.122 21 O -0.363 6.363 22 C 0.025 3.975 23 C -0.135 4.135 24 H 0.064 0.936 25 H 0.065 0.935 26 H 0.104 0.896 27 H 0.113 0.887 28 H 0.089 0.911 29 H 0.085 0.915 30 H 0.082 0.918 31 H 0.403 0.597 32 H 0.215 0.785 33 H 0.138 0.862 34 H 0.381 0.619 35 H -0.249 1.249 36 H -0.256 1.256 37 H 0.162 0.838 38 H 0.046 0.954 39 H 0.090 0.910 40 H 0.046 0.954 41 H 0.092 0.908 42 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.605 1.470 2.604 3.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.137 4.137 8 C 0.035 3.965 9 C -0.008 4.008 10 N -0.374 5.374 11 C 0.377 3.623 12 O -0.409 6.409 13 C -0.243 4.243 14 C -0.036 4.036 15 O -0.061 6.061 16 C -0.105 4.105 17 C -0.145 4.145 18 O -0.327 6.327 19 Si 0.603 3.397 20 C -0.142 4.142 21 O -0.281 6.281 22 C -0.071 4.071 23 C -0.174 4.174 24 H 0.083 0.917 25 H 0.083 0.917 26 H 0.122 0.878 27 H 0.132 0.868 28 H 0.108 0.892 29 H 0.103 0.897 30 H 0.100 0.900 31 H 0.238 0.762 32 H 0.231 0.769 33 H 0.155 0.845 34 H 0.229 0.771 35 H -0.174 1.174 36 H -0.180 1.180 37 H 0.180 0.820 38 H 0.065 0.935 39 H 0.109 0.891 40 H 0.065 0.935 41 H 0.111 0.889 42 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -0.986 1.861 2.189 3.038 hybrid contribution -1.056 -0.790 -0.645 1.468 sum -2.041 1.070 1.544 2.775 Atomic orbital electron populations 1.23338 0.75778 1.04090 1.02772 1.86513 1.23834 1.33164 1.83782 1.23339 0.91386 0.81516 0.72272 1.90697 1.66881 1.36397 1.44805 1.22369 0.88185 1.00977 1.01368 0.85018 1.23067 0.96114 0.95191 0.99359 1.23070 0.92478 0.91250 0.89686 1.21585 0.91779 0.89416 0.98012 1.45601 1.19913 1.12237 1.59632 1.17245 0.80136 0.87497 0.77426 1.90828 1.68020 1.23780 1.58249 1.21469 0.98721 0.93839 1.10255 1.24510 0.93094 0.90099 0.95873 1.83699 1.25206 1.38979 1.58258 1.22674 0.92106 0.89833 1.05909 1.24395 0.93450 1.11822 0.84787 1.86680 1.49575 1.72199 1.24232 0.94432 0.80880 0.73835 0.90546 1.22537 0.95085 0.97561 0.98971 1.87982 1.77219 1.34787 1.28144 1.22817 0.95842 0.99957 0.88487 1.23544 0.97869 1.00435 0.95517 0.91704 0.91672 0.87771 0.86818 0.89237 0.89723 0.89994 0.76180 0.76911 0.84452 0.77109 1.17353 1.17981 0.82033 0.93525 0.89129 0.93543 0.88902 0.87800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.32 10.57 -39.26 -0.41 -0.74 16 3 C 0.47 0.56 7.49 36.01 0.27 0.83 16 4 O -0.50 -2.03 15.65 -18.75 -0.29 -2.32 16 5 C -0.11 0.19 3.92 -90.82 -0.36 -0.16 16 6 H 0.13 -0.45 7.59 -51.93 -0.39 -0.84 16 7 C -0.10 0.18 6.77 -25.92 -0.18 0.01 16 8 C 0.08 -0.16 0.78 -89.81 -0.07 -0.23 16 9 C 0.12 -0.17 4.75 -4.04 -0.02 -0.19 16 10 N -0.72 0.79 5.46 -61.40 -0.34 0.45 16 11 C 0.59 1.25 7.81 -12.54 -0.10 1.15 16 12 O -0.53 -3.30 16.98 5.27 0.09 -3.21 16 13 C -0.24 -0.22 6.31 -103.28 -0.65 -0.87 16 14 C 0.03 -0.06 11.61 30.08 0.35 0.29 16 15 O -0.17 0.08 8.90 7.66 0.07 0.15 16 16 C -0.06 -0.01 6.18 -35.74 -0.22 -0.23 16 17 C -0.04 0.03 2.97 36.00 0.11 0.14 16 18 O -0.52 -0.26 12.88 -35.23 -0.45 -0.71 16 19 Si 0.70 -1.08 32.09 -169.99 -5.46 -6.54 16 20 C -0.12 -0.20 10.90 -37.45 -0.41 -0.61 16 21 O -0.36 0.28 10.59 -35.23 -0.37 -0.09 16 22 C 0.03 -0.05 10.62 101.05 1.07 1.02 16 23 C -0.14 0.33 6.25 -25.78 -0.16 0.17 16 24 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 25 H 0.06 -0.05 8.13 -51.92 -0.42 -0.48 16 26 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 27 H 0.11 -0.02 7.43 -51.93 -0.39 -0.41 16 28 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 29 H 0.08 -0.14 7.30 -51.93 -0.38 -0.52 16 30 H 0.08 -0.05 6.87 -51.93 -0.36 -0.41 16 31 H 0.40 -1.32 7.43 -40.82 -0.30 -1.62 16 32 H 0.21 -1.27 7.47 -52.49 -0.39 -1.67 16 33 H 0.14 -0.30 7.96 -51.93 -0.41 -0.72 16 34 H 0.38 -0.90 8.70 45.56 0.40 -0.50 16 35 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 36 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 37 H 0.16 0.34 8.06 -52.49 -0.42 -0.08 16 38 H 0.05 -0.09 6.68 -51.93 -0.35 -0.44 16 39 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 40 H 0.05 -0.12 7.66 -51.93 -0.40 -0.52 16 41 H 0.09 -0.34 8.10 -51.93 -0.42 -0.76 16 42 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 LS Contribution 364.26 15.07 5.49 5.49 Total: 0.00 -10.54 364.26 -6.52 -17.06 By element: Atomic # 1 Polarization: -6.35 SS G_CDS: -5.55 Total: -11.90 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: 0.71 Total: 2.35 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.34 Total: 0.45 kcal Atomic # 8 Polarization: -5.54 SS G_CDS: -1.38 Total: -6.92 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.46 Total: -6.54 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -10.54 -6.52 -17.06 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_13456056.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.495 kcal (2) G-P(sol) polarization free energy of solvation -10.542 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.061 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.555 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds