Wall clock time and date at job start Sun Mar 7 2021 01:03:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34223 * 116.99979 * 2 1 4 4 O 1.20825 * 120.00338 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99562 * 180.02562 * 3 2 1 6 6 H 1.08994 * 112.84917 * 48.81026 * 5 3 2 7 7 C 1.53782 * 113.61097 * 179.97438 * 5 3 2 8 8 C 1.53786 * 87.07824 * 139.98341 * 7 5 3 9 9 C 1.53001 * 113.61423 * 89.11728 * 8 7 5 10 10 N 1.46503 * 109.46973 * 70.50038 * 9 8 7 11 11 C 1.34775 * 120.00038 * 176.37968 * 10 9 8 12 12 O 1.21696 * 119.99759 * 359.97438 * 11 10 9 13 13 C 1.46671 * 120.00341 * 179.97438 * 11 10 9 14 14 C 1.37872 * 126.23461 * 180.02562 * 13 11 10 15 15 C 1.50698 * 126.45661 * 0.24052 * 14 13 11 16 16 C 1.39840 * 107.08273 * 179.97438 * 14 13 11 17 17 C 1.35449 * 107.86737 * 359.97438 * 16 14 13 18 18 C 1.50695 * 125.56249 * 179.97438 * 17 16 14 19 19 O 1.42903 * 109.47258 * 65.00700 * 18 17 16 20 20 Si 1.86301 * 109.47001 * 185.00387 * 18 17 16 21 21 N 1.35537 * 108.87152 * 0.02562 * 17 16 14 22 22 O 1.42906 * 113.61095 * 219.93713 * 8 7 5 23 23 C 1.42905 * 113.99730 * 165.29439 * 22 8 7 24 24 C 1.53779 * 87.17146 * 334.52420 * 8 7 5 25 25 H 1.08994 * 109.47472 * 180.02562 * 1 2 3 26 26 H 1.08999 * 109.46815 * 299.99705 * 1 2 3 27 27 H 1.08999 * 109.47406 * 59.99719 * 1 2 3 28 28 H 1.09005 * 113.61240 * 25.43901 * 7 5 3 29 29 H 1.08997 * 113.69542 * 254.54033 * 7 5 3 30 30 H 1.08990 * 109.46965 * 310.49891 * 9 8 7 31 31 H 1.08997 * 109.46594 * 190.49546 * 9 8 7 32 32 H 0.97001 * 119.99772 * 356.37722 * 10 9 8 33 33 H 1.08997 * 109.47199 * 269.71555 * 15 14 13 34 34 H 1.08992 * 109.47116 * 29.71426 * 15 14 13 35 35 H 1.09001 * 109.46749 * 149.71433 * 15 14 13 36 36 H 1.08004 * 126.06113 * 179.97438 * 16 14 13 37 37 H 1.08997 * 109.47830 * 305.00182 * 18 17 16 38 38 H 0.96695 * 114.00078 * 59.99652 * 19 18 17 39 39 H 1.48500 * 109.99982 * 180.02562 * 20 18 17 40 40 H 1.48502 * 110.00143 * 301.31880 * 20 18 17 41 41 H 0.97000 * 125.67716 * 179.97438 * 21 17 16 42 42 H 1.08998 * 109.47096 * 185.15069 * 23 22 8 43 43 H 1.09004 * 109.46423 * 305.14752 * 23 22 8 44 44 H 1.08997 * 109.47385 * 65.14708 * 23 22 8 45 45 H 1.09003 * 113.61270 * 140.02200 * 24 8 7 46 46 H 1.09000 * 113.61422 * 270.92326 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2747 -0.0006 6 1 4.0233 0.6364 -0.7568 7 6 4.1078 2.7141 -0.0011 8 6 5.1815 2.2268 0.9862 9 6 6.4442 1.6951 0.3052 10 7 7.1797 2.8093 -0.2981 11 6 8.3686 2.5884 -0.8933 12 8 8.8313 1.4634 -0.9291 13 6 9.1047 3.7037 -1.4978 14 6 10.3240 3.6245 -2.1365 15 6 11.1449 2.3786 -2.3479 16 6 10.6524 4.9173 -2.5565 17 6 9.6501 5.7451 -2.1760 18 6 9.5967 7.2300 -2.4272 19 8 9.5148 7.4726 -3.8331 20 14 8.0986 7.9488 -1.5848 21 7 8.7035 5.0200 -1.5315 22 8 5.4652 3.1606 2.0301 23 6 6.1978 2.6046 3.1239 24 6 4.1929 1.1235 1.3986 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8899 28 1 3.4175 3.4404 0.4280 29 1 4.5107 3.0301 -0.9633 30 1 6.1658 0.9814 -0.4701 31 1 7.0750 1.2012 1.0443 32 1 6.8109 3.7060 -0.2693 33 1 11.8254 2.2448 -1.5070 34 1 10.4832 1.5155 -2.4205 35 1 11.7198 2.4743 -3.2690 36 1 11.5466 5.2046 -3.0897 37 1 10.4969 7.6985 -2.0295 38 1 8.7363 7.0838 -4.2547 39 1 8.0341 9.4128 -1.8255 40 1 6.8664 7.2959 -2.0955 41 1 7.8805 5.3705 -1.1564 42 1 6.2936 3.3502 3.9133 43 1 5.6689 1.7330 3.5096 44 1 7.1893 2.3067 2.7832 45 1 4.6642 0.1548 1.5650 46 1 3.5259 1.4157 2.2096 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:03:42 Heat of formation + Delta-G solvation = -117.045254 kcal Electronic energy + Delta-G solvation = -30177.220330 eV Core-core repulsion = 25842.942330 eV Total energy + Delta-G solvation = -4334.278000 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.64664 -42.23439 -40.87436 -39.82280 -37.92274 -37.71889 -36.90604 -35.63843 -33.56824 -31.67233 -29.98293 -28.74951 -28.25651 -28.24408 -27.12850 -26.46895 -25.45878 -22.45717 -22.16920 -21.61712 -20.68248 -20.10560 -19.69027 -19.16458 -18.16775 -18.02443 -17.55569 -17.20816 -16.92727 -16.80543 -16.69904 -16.31303 -16.11865 -16.11520 -15.64433 -15.18147 -14.87913 -14.82066 -14.50365 -14.31761 -14.10999 -13.99281 -13.81974 -13.64257 -13.48149 -13.37217 -13.34272 -13.16668 -12.98942 -12.80077 -12.72236 -12.61400 -12.25072 -12.18759 -11.84842 -11.64895 -11.50918 -11.07104 -10.80851 -10.74917 -10.31183 -9.77520 -9.15605 -5.25557 0.33683 0.97353 1.06569 1.26766 1.56240 1.60410 1.68580 1.84126 1.96839 2.35146 2.56447 2.99214 3.03771 3.17055 3.17799 3.26912 3.55954 3.73967 3.82544 3.90976 4.10887 4.13030 4.18288 4.19082 4.24620 4.28714 4.31620 4.38429 4.38888 4.41172 4.44168 4.54811 4.62383 4.65581 4.71258 4.78928 4.89468 4.94367 5.03509 5.14036 5.24455 5.30895 5.47172 5.68199 5.92193 5.94108 6.16649 6.25241 6.38361 6.65109 7.09019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.501 6.501 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.101 4.101 8 C 0.075 3.925 9 C 0.116 3.884 10 N -0.727 5.727 11 C 0.592 3.408 12 O -0.521 6.521 13 C -0.052 4.052 14 C -0.067 4.067 15 C -0.093 4.093 16 C -0.172 4.172 17 C 0.018 3.982 18 C -0.045 4.045 19 O -0.520 6.520 20 Si 0.667 3.333 21 N -0.535 5.535 22 O -0.363 6.363 23 C 0.025 3.975 24 C -0.134 4.134 25 H 0.104 0.896 26 H 0.064 0.936 27 H 0.064 0.936 28 H 0.113 0.887 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.083 0.917 32 H 0.399 0.601 33 H 0.069 0.931 34 H 0.080 0.920 35 H 0.064 0.936 36 H 0.147 0.853 37 H 0.133 0.867 38 H 0.378 0.622 39 H -0.243 1.243 40 H -0.254 1.254 41 H 0.412 0.588 42 H 0.091 0.909 43 H 0.047 0.953 44 H 0.046 0.954 45 H 0.093 0.907 46 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.430 -0.556 2.998 3.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.138 4.138 8 C 0.034 3.966 9 C -0.008 4.008 10 N -0.380 5.380 11 C 0.380 3.620 12 O -0.397 6.397 13 C -0.165 4.165 14 C -0.076 4.076 15 C -0.150 4.150 16 C -0.197 4.197 17 C -0.098 4.098 18 C -0.156 4.156 19 O -0.325 6.325 20 Si 0.566 3.434 21 N -0.136 5.136 22 O -0.282 6.282 23 C -0.071 4.071 24 C -0.173 4.173 25 H 0.122 0.878 26 H 0.083 0.917 27 H 0.083 0.917 28 H 0.132 0.868 29 H 0.106 0.894 30 H 0.104 0.896 31 H 0.101 0.899 32 H 0.233 0.767 33 H 0.088 0.912 34 H 0.099 0.901 35 H 0.083 0.917 36 H 0.165 0.835 37 H 0.150 0.850 38 H 0.225 0.775 39 H -0.167 1.167 40 H -0.179 1.179 41 H 0.251 0.749 42 H 0.109 0.891 43 H 0.065 0.935 44 H 0.065 0.935 45 H 0.111 0.889 46 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.760 -0.122 3.063 3.534 hybrid contribution -0.964 0.110 -0.865 1.300 sum -2.724 -0.012 2.197 3.500 Atomic orbital electron populations 1.23340 0.75761 1.04101 1.02770 1.86512 1.23841 1.33125 1.83765 1.23334 0.91381 0.81530 0.72276 1.90699 1.66888 1.36404 1.44818 1.22358 0.88210 1.00876 1.01404 0.85004 1.23074 0.96172 0.95295 0.99301 1.23091 0.92526 0.91272 0.89669 1.21598 0.91758 0.89339 0.98056 1.45680 1.21293 1.11772 1.59212 1.17003 0.79983 0.87353 0.77664 1.90851 1.67825 1.22396 1.58591 1.20106 0.99488 0.83180 1.13681 1.20039 0.93224 0.95971 0.98347 1.20388 0.98890 0.94143 1.01574 1.20646 1.00444 0.91607 1.06963 1.20798 0.91760 0.94726 1.02534 1.24483 1.12991 0.91262 0.86837 1.86671 1.48922 1.78025 1.18901 0.95596 0.75511 0.82457 0.89812 1.42026 1.19024 1.06944 1.45583 1.87984 1.75309 1.35518 1.29376 1.22822 0.95330 0.99899 0.89067 1.23537 0.97818 1.00421 0.95488 0.87755 0.91699 0.91682 0.86819 0.89419 0.89625 0.89881 0.76723 0.91195 0.90080 0.91707 0.83533 0.84952 0.77455 1.16655 1.17905 0.74904 0.89091 0.93453 0.93545 0.88855 0.87771 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.28 10.57 -39.24 -0.41 -0.70 16 3 C 0.47 0.53 7.49 36.01 0.27 0.80 16 4 O -0.50 -2.02 15.65 -18.75 -0.29 -2.31 16 5 C -0.11 0.20 3.91 -90.82 -0.36 -0.16 16 6 H 0.13 -0.46 7.60 -51.93 -0.39 -0.85 16 7 C -0.10 0.18 6.78 -25.92 -0.18 0.00 16 8 C 0.07 -0.17 0.77 -89.81 -0.07 -0.24 16 9 C 0.12 -0.20 4.70 -4.04 -0.02 -0.22 16 10 N -0.73 0.81 5.47 -61.62 -0.34 0.48 16 11 C 0.59 1.06 7.79 -12.86 -0.10 0.96 16 12 O -0.52 -2.53 14.80 5.19 0.08 -2.46 16 13 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 14 C -0.07 -0.15 6.21 -104.16 -0.65 -0.79 16 15 C -0.09 -0.17 9.83 36.00 0.35 0.18 16 16 C -0.17 -0.20 10.66 -39.98 -0.43 -0.63 16 17 C 0.02 -0.01 6.10 -81.95 -0.50 -0.51 16 18 C -0.04 0.07 2.98 36.00 0.11 0.18 16 19 O -0.52 -0.03 12.88 -35.23 -0.45 -0.48 16 20 Si 0.67 -1.76 30.98 -169.99 -5.27 -7.03 16 21 N -0.54 0.60 5.47 -5.70 -0.03 0.57 16 22 O -0.36 0.36 10.59 -35.23 -0.37 -0.01 16 23 C 0.02 -0.06 10.53 101.05 1.06 1.01 16 24 C -0.13 0.35 6.21 -25.78 -0.16 0.19 16 25 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 28 H 0.11 -0.02 7.43 -51.93 -0.39 -0.40 16 29 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 30 H 0.09 -0.17 7.30 -51.93 -0.38 -0.55 16 31 H 0.08 -0.10 7.03 -51.93 -0.36 -0.46 16 32 H 0.40 -1.11 7.60 -40.82 -0.31 -1.42 16 33 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 34 H 0.08 0.26 6.48 -51.93 -0.34 -0.07 16 35 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 36 H 0.15 0.07 8.06 -52.48 -0.42 -0.35 16 37 H 0.13 -0.32 7.96 -51.93 -0.41 -0.73 16 38 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 39 H -0.24 -0.20 7.11 56.52 0.40 0.20 16 40 H -0.25 0.31 7.11 56.52 0.40 0.71 16 41 H 0.41 -1.45 6.00 -40.82 -0.24 -1.69 16 42 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 43 H 0.05 -0.14 7.48 -51.93 -0.39 -0.53 16 44 H 0.05 -0.10 7.03 -51.93 -0.37 -0.47 16 45 H 0.09 -0.36 8.10 -51.93 -0.42 -0.78 16 46 H 0.10 -0.20 8.10 -51.93 -0.42 -0.62 16 LS Contribution 383.97 15.07 5.79 5.79 Total: 0.00 -9.30 383.97 -8.08 -17.38 By element: Atomic # 1 Polarization: -5.78 SS G_CDS: -6.60 Total: -12.38 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -0.17 Total: 1.16 kcal Atomic # 7 Polarization: 1.41 SS G_CDS: -0.37 Total: 1.04 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -1.46 Total: -5.96 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.27 Total: -7.03 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -9.30 -8.08 -17.38 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.664 kcal (2) G-P(sol) polarization free energy of solvation -9.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.078 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.381 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.045 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds