Wall clock time and date at job start Sun Mar 7 2021 01:03:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34231 * 116.99549 * 2 1 4 4 O 1.20819 * 120.00591 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99576 * 179.97438 * 3 2 1 6 6 H 1.09003 * 112.84876 * 48.80852 * 5 3 2 7 7 C 1.53784 * 113.61334 * 179.97438 * 5 3 2 8 8 C 1.53783 * 87.07983 * 139.98666 * 7 5 3 9 9 C 1.52998 * 113.61394 * 89.11623 * 8 7 5 10 10 N 1.46504 * 109.47052 * 59.97845 * 9 8 7 11 11 C 1.34774 * 119.99917 * 185.08821 * 10 9 8 12 12 O 1.21287 * 120.00036 * 359.97438 * 11 10 9 13 13 C 1.50692 * 120.00060 * 179.97438 * 11 10 9 14 14 C 1.50704 * 109.47211 * 179.97438 * 13 11 10 15 15 C 1.34848 * 125.89343 * 85.02534 * 14 13 11 16 16 C 1.40885 * 107.41818 * 180.02562 * 15 14 13 17 17 C 1.34847 * 107.42013 * 359.97438 * 16 15 14 18 18 C 1.50695 * 125.89543 * 180.02562 * 17 16 15 19 19 O 1.42897 * 109.47473 * 244.97881 * 18 17 16 20 20 Si 1.86307 * 109.46968 * 4.97793 * 18 17 16 21 21 N 1.36347 * 125.88565 * 264.71417 * 14 13 11 22 22 O 1.42904 * 113.61241 * 220.02040 * 8 7 5 23 23 C 1.42891 * 113.99902 * 174.60353 * 22 8 7 24 24 C 1.53776 * 113.61843 * 277.50018 * 5 3 2 25 25 H 1.09000 * 109.47141 * 299.99971 * 1 2 3 26 26 H 1.08996 * 109.47177 * 60.00296 * 1 2 3 27 27 H 1.08996 * 109.46856 * 179.97438 * 1 2 3 28 28 H 1.09001 * 113.61051 * 254.53337 * 7 5 3 29 29 H 1.08999 * 113.61301 * 25.43324 * 7 5 3 30 30 H 1.09003 * 109.46713 * 179.97438 * 9 8 7 31 31 H 1.08994 * 109.47633 * 299.97205 * 9 8 7 32 32 H 0.96993 * 119.99902 * 5.08301 * 10 9 8 33 33 H 1.09003 * 109.47217 * 299.99952 * 13 11 10 34 34 H 1.09000 * 109.47137 * 59.99733 * 13 11 10 35 35 H 1.08003 * 126.28889 * 359.97438 * 15 14 13 36 36 H 1.08000 * 126.29212 * 180.02562 * 16 15 14 37 37 H 1.09000 * 109.47665 * 124.97210 * 18 17 16 38 38 H 0.96703 * 114.00262 * 180.02562 * 19 18 17 39 39 H 1.48499 * 110.00053 * 178.68297 * 20 18 17 40 40 H 1.48504 * 109.99757 * 300.00028 * 20 18 17 41 41 H 0.96991 * 125.64210 * 359.97438 * 21 14 13 42 42 H 1.09008 * 109.47400 * 65.98177 * 23 22 8 43 43 H 1.09003 * 109.47381 * 185.97811 * 23 22 8 44 44 H 1.09004 * 109.47368 * 305.98315 * 23 22 8 45 45 H 1.09004 * 113.61594 * 334.56532 * 24 5 3 46 46 H 1.08995 * 113.61896 * 105.47207 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0239 0.6363 -0.7550 7 6 4.1077 2.7143 -0.0001 8 6 5.1807 2.2275 0.9881 9 6 6.4439 1.6956 0.3083 10 7 7.0455 2.7568 -0.5031 11 6 8.1150 2.4883 -1.2779 12 8 8.5798 1.3683 -1.3031 13 6 8.7335 3.5796 -2.1130 14 6 9.9054 3.0226 -2.8795 15 6 9.8433 2.3888 -4.0682 16 6 11.1590 2.0341 -4.4261 17 6 11.9750 2.4650 -3.4429 18 6 13.4727 2.3033 -3.4033 19 8 13.8314 1.4531 -2.3122 20 14 14.0577 1.5437 -5.0007 21 7 11.2119 3.0779 -2.4936 22 8 5.4622 3.1609 2.0329 23 6 6.3672 2.6691 3.0234 24 6 4.1906 1.1238 1.3978 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 4.5111 3.0285 -0.9627 29 1 3.4170 3.4408 0.4280 30 1 7.1556 1.3709 1.0673 31 1 6.1846 0.8519 -0.3312 32 1 6.6740 3.6525 -0.4827 33 1 7.9922 3.9663 -2.8123 34 1 9.0748 4.3853 -1.4630 35 1 8.9493 2.1891 -4.6402 36 1 11.4590 1.5134 -5.3235 37 1 13.9403 3.2791 -3.2725 38 1 14.7830 1.3047 -2.2255 39 1 15.5365 1.4081 -4.9871 40 1 13.4274 0.2125 -5.1909 41 1 11.5435 3.4838 -1.6775 42 1 7.3489 2.5163 2.5748 43 1 6.4470 3.3931 3.8343 44 1 5.9961 1.7226 3.4166 45 1 3.5227 1.4153 2.2084 46 1 4.6610 0.1546 1.5634 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:03:46 Heat of formation + Delta-G solvation = -113.707091 kcal Electronic energy + Delta-G solvation = -29456.223599 eV Core-core repulsion = 25122.090352 eV Total energy + Delta-G solvation = -4334.133246 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.32872 -42.14393 -40.90991 -39.96929 -37.76919 -37.68684 -36.88682 -35.38148 -33.22606 -31.81535 -30.26447 -29.44763 -28.23704 -28.19495 -26.91855 -25.64558 -24.75995 -22.08779 -21.83641 -21.20798 -20.93687 -20.18986 -19.25717 -18.55893 -18.37731 -18.05734 -18.01099 -17.49522 -17.04892 -16.80230 -16.47105 -16.14814 -16.08830 -15.89802 -15.65018 -15.02084 -14.91793 -14.55045 -14.49720 -14.30079 -14.22497 -13.99182 -13.88806 -13.72779 -13.38983 -13.32060 -13.24126 -13.12462 -12.88436 -12.76445 -12.65376 -12.39646 -12.17501 -11.80558 -11.80391 -11.63942 -11.43653 -10.99008 -10.69521 -10.56850 -10.17413 -9.65615 -8.84265 -4.87880 1.11488 1.13386 1.33495 1.61797 1.63438 1.65890 1.88169 2.04843 2.23402 2.50861 2.63748 3.06213 3.10791 3.24355 3.35610 3.37633 3.66009 3.81398 3.95882 3.95997 3.98347 4.03238 4.14923 4.17409 4.22988 4.26334 4.26898 4.30502 4.38449 4.44871 4.47780 4.48563 4.58767 4.64969 4.69803 4.71168 4.75502 4.89172 4.95792 5.27216 5.35615 5.36868 5.43227 5.98341 6.12352 6.25353 6.38780 6.42052 6.70195 6.71244 7.19689 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.109 4.109 6 H 0.131 0.869 7 C -0.099 4.099 8 C 0.076 3.924 9 C 0.112 3.888 10 N -0.728 5.728 11 C 0.511 3.489 12 O -0.521 6.521 13 C -0.071 4.071 14 C 0.036 3.964 15 C -0.172 4.172 16 C -0.183 4.183 17 C 0.036 3.964 18 C -0.056 4.056 19 O -0.541 6.541 20 Si 0.711 3.289 21 N -0.537 5.537 22 O -0.362 6.362 23 C 0.024 3.976 24 C -0.135 4.135 25 H 0.064 0.936 26 H 0.065 0.935 27 H 0.104 0.896 28 H 0.090 0.910 29 H 0.113 0.887 30 H 0.077 0.923 31 H 0.087 0.913 32 H 0.406 0.594 33 H 0.119 0.881 34 H 0.100 0.900 35 H 0.138 0.862 36 H 0.142 0.858 37 H 0.071 0.929 38 H 0.380 0.620 39 H -0.262 1.262 40 H -0.252 1.252 41 H 0.411 0.589 42 H 0.045 0.955 43 H 0.090 0.910 44 H 0.046 0.954 45 H 0.103 0.897 46 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.187 2.949 -0.078 2.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.129 4.129 6 H 0.149 0.851 7 C -0.136 4.136 8 C 0.036 3.964 9 C -0.012 4.012 10 N -0.382 5.382 11 C 0.296 3.704 12 O -0.395 6.395 13 C -0.111 4.111 14 C -0.077 4.077 15 C -0.196 4.196 16 C -0.208 4.208 17 C -0.077 4.077 18 C -0.165 4.165 19 O -0.348 6.348 20 Si 0.611 3.389 21 N -0.131 5.131 22 O -0.281 6.281 23 C -0.072 4.072 24 C -0.173 4.173 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.108 0.892 29 H 0.131 0.869 30 H 0.095 0.905 31 H 0.105 0.895 32 H 0.241 0.759 33 H 0.137 0.863 34 H 0.119 0.881 35 H 0.155 0.845 36 H 0.159 0.841 37 H 0.089 0.911 38 H 0.228 0.772 39 H -0.188 1.188 40 H -0.176 1.176 41 H 0.248 0.752 42 H 0.064 0.936 43 H 0.108 0.892 44 H 0.065 0.935 45 H 0.122 0.878 46 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 0.042 1.979 -0.247 1.995 hybrid contribution 0.454 0.048 1.627 1.690 sum 0.497 2.028 1.381 2.503 Atomic orbital electron populations 1.23336 0.75803 1.04074 1.02768 1.86515 1.23820 1.33178 1.83793 1.23341 0.91390 0.81506 0.72249 1.90694 1.66883 1.36384 1.44820 1.22301 0.88155 1.01010 1.01388 0.85089 1.23061 0.96053 0.95168 0.99315 1.23078 0.92689 0.91166 0.89501 1.21595 0.93480 0.91073 0.95022 1.45856 1.32345 1.13871 1.46153 1.20641 0.79869 0.90070 0.79788 1.90797 1.61136 1.23098 1.64471 1.20112 0.95467 0.96828 0.98715 1.19439 0.83641 1.07472 0.97178 1.20566 0.97418 1.04789 0.96868 1.20612 0.92824 1.06943 1.00440 1.19542 0.91232 1.04459 0.92436 1.24498 0.92746 0.97710 1.01520 1.86629 1.28956 1.69888 1.49347 0.94477 0.78904 0.84329 0.81227 1.41766 1.05937 1.45959 1.19466 1.88014 1.65284 1.39642 1.35142 1.22820 0.92651 1.00345 0.91391 1.23511 0.97929 1.00374 0.95504 0.91710 0.91668 0.87789 0.89187 0.86863 0.90514 0.89518 0.75940 0.86296 0.88144 0.84450 0.84086 0.91104 0.77200 1.18752 1.17602 0.75231 0.93613 0.89158 0.93496 0.87849 0.89089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.47 10.57 -39.26 -0.41 -0.88 16 3 C 0.47 0.77 7.48 36.01 0.27 1.04 16 4 O -0.50 -2.21 15.65 -18.74 -0.29 -2.50 16 5 C -0.11 0.13 3.91 -90.96 -0.36 -0.22 16 6 H 0.13 -0.35 7.66 -51.93 -0.40 -0.75 16 7 C -0.10 0.13 6.57 -25.92 -0.17 -0.04 16 8 C 0.08 -0.12 0.88 -89.78 -0.08 -0.20 16 9 C 0.11 -0.13 4.81 -4.04 -0.02 -0.15 16 10 N -0.73 1.14 5.12 -60.30 -0.31 0.83 16 11 C 0.51 0.46 7.82 -10.99 -0.09 0.38 16 12 O -0.52 -3.04 16.03 5.55 0.09 -2.95 16 13 C -0.07 0.11 6.24 -29.04 -0.18 -0.07 16 14 C 0.04 0.06 5.66 -81.79 -0.46 -0.40 16 15 C -0.17 -0.48 10.76 -39.78 -0.43 -0.91 16 16 C -0.18 -0.55 9.37 -39.78 -0.37 -0.92 16 17 C 0.04 0.10 6.53 -81.79 -0.53 -0.43 16 18 C -0.06 -0.04 3.07 36.00 0.11 0.07 16 19 O -0.54 -1.22 12.86 -35.23 -0.45 -1.67 16 20 Si 0.71 -0.16 30.60 -169.99 -5.20 -5.37 16 21 N -0.54 -1.04 6.08 -5.44 -0.03 -1.08 16 22 O -0.36 0.07 10.65 -35.23 -0.38 -0.31 16 23 C 0.02 -0.04 10.32 101.05 1.04 1.00 16 24 C -0.13 0.24 6.61 -25.90 -0.17 0.07 16 25 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 26 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 27 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 28 H 0.09 -0.23 7.54 -51.93 -0.39 -0.63 16 29 H 0.11 0.04 7.43 -51.93 -0.39 -0.35 16 30 H 0.08 -0.03 6.38 -51.93 -0.33 -0.36 16 31 H 0.09 -0.07 7.34 -51.93 -0.38 -0.45 16 32 H 0.41 -1.44 8.10 -40.82 -0.33 -1.77 16 33 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 34 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 35 H 0.14 0.18 8.06 -52.48 -0.42 -0.24 16 36 H 0.14 0.19 6.24 -52.49 -0.33 -0.14 16 37 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 38 H 0.38 -0.77 8.74 45.56 0.40 -0.38 16 39 H -0.26 -0.35 7.11 56.52 0.40 0.06 16 40 H -0.25 -0.85 7.11 56.52 0.40 -0.45 16 41 H 0.41 0.02 8.96 -40.82 -0.37 -0.35 16 42 H 0.05 -0.07 6.73 -51.92 -0.35 -0.42 16 43 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 44 H 0.05 -0.11 7.82 -51.93 -0.41 -0.51 16 45 H 0.10 -0.11 8.09 -51.93 -0.42 -0.53 16 46 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 LS Contribution 386.34 15.07 5.82 5.82 Total: 0.00 -12.05 386.34 -8.22 -20.27 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -6.68 Total: -12.42 kcal Atomic # 6 Polarization: 0.63 SS G_CDS: -0.37 Total: 0.25 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.34 Total: -0.24 kcal Atomic # 8 Polarization: -6.87 SS G_CDS: -1.45 Total: -8.32 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.20 Total: -5.37 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -12.05 -8.22 -20.27 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.440 kcal (2) G-P(sol) polarization free energy of solvation -12.048 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.488 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.219 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.267 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.707 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds