Wall clock time and date at job start Sun Mar 7 2021 01:05:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34225 * 117.00401 * 2 1 4 4 O 1.20830 * 119.99849 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00236 * 179.97438 * 3 2 1 6 6 H 1.08999 * 112.84780 * 48.80504 * 5 3 2 7 7 C 1.53784 * 113.61601 * 179.97438 * 5 3 2 8 8 C 1.53781 * 87.16986 * 139.94153 * 7 5 3 9 9 C 1.53002 * 113.61544 * 89.16309 * 8 7 5 10 10 N 1.46503 * 109.46803 * 59.97877 * 9 8 7 11 11 C 1.34775 * 119.99791 * 185.08763 * 10 9 8 12 12 O 1.21283 * 120.00177 * 0.02562 * 11 10 9 13 13 C 1.50697 * 120.00271 * 180.02562 * 11 10 9 14 14 O 1.42903 * 109.47395 * 180.02562 * 13 11 10 15 15 C 1.35903 * 117.00011 * 180.02562 * 14 13 11 16 16 C 1.38706 * 120.05344 * 180.02562 * 15 14 13 17 17 C 1.38166 * 119.94393 * 179.97438 * 16 15 14 18 18 C 1.50694 * 119.97476 * 180.02562 * 17 16 15 19 19 O 1.42897 * 109.47273 * 300.00214 * 18 17 16 20 20 Si 1.86305 * 109.47325 * 180.02562 * 18 17 16 21 21 C 1.38249 * 120.05414 * 0.02562 * 17 16 15 22 22 C 1.38287 * 120.11454 * 0.02562 * 21 17 16 23 23 C 1.38128 * 120.04910 * 359.68091 * 22 21 17 24 24 O 1.42908 * 113.61466 * 220.06228 * 8 7 5 25 25 C 1.42891 * 113.99970 * 174.60577 * 24 8 7 26 26 C 1.53775 * 113.61631 * 277.49603 * 5 3 2 27 27 H 1.08999 * 109.47702 * 180.02562 * 1 2 3 28 28 H 1.09004 * 109.47149 * 300.00314 * 1 2 3 29 29 H 1.09000 * 109.46984 * 60.00087 * 1 2 3 30 30 H 1.08991 * 113.62038 * 254.53151 * 7 5 3 31 31 H 1.09003 * 113.60988 * 25.35604 * 7 5 3 32 32 H 1.08991 * 109.47359 * 179.97438 * 9 8 7 33 33 H 1.09001 * 109.46804 * 299.98666 * 9 8 7 34 34 H 0.96997 * 120.00703 * 5.09606 * 10 9 8 35 35 H 1.08997 * 109.47609 * 300.00775 * 13 11 10 36 36 H 1.09005 * 109.46949 * 60.00189 * 13 11 10 37 37 H 1.07996 * 120.03225 * 359.97438 * 16 15 14 38 38 H 1.09006 * 109.47064 * 60.00054 * 18 17 16 39 39 H 0.96700 * 113.99674 * 299.99953 * 19 18 17 40 40 H 1.48505 * 110.00122 * 180.02562 * 20 18 17 41 41 H 1.48502 * 110.00103 * 301.31851 * 20 18 17 42 42 H 1.07999 * 119.94575 * 179.97438 * 21 17 16 43 43 H 1.07999 * 119.97558 * 179.97438 * 22 21 17 44 44 H 1.08004 * 120.02447 * 180.32315 * 23 22 21 45 45 H 1.09008 * 109.47638 * 65.97313 * 25 24 8 46 46 H 1.08998 * 109.47532 * 185.97386 * 25 24 8 47 47 H 1.09001 * 109.47694 * 305.97563 * 25 24 8 48 48 H 1.09000 * 113.62019 * 334.56628 * 26 5 3 49 49 H 1.09009 * 113.61287 * 105.38852 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2747 0.0006 6 1 4.0239 0.6361 -0.7549 7 6 4.1079 2.7141 -0.0001 8 6 5.1810 2.2297 0.9891 9 6 6.4456 1.6994 0.3104 10 7 7.0459 2.7611 -0.5012 11 6 8.1164 2.4938 -1.2752 12 8 8.5825 1.3744 -1.3001 13 6 8.7344 3.5859 -2.1097 14 8 9.8461 3.0588 -2.8366 15 6 10.5200 3.9201 -3.6435 16 6 11.6090 3.4755 -4.3785 17 6 12.2922 4.3529 -5.1985 18 6 13.4751 3.8705 -5.9978 19 8 14.4791 3.3740 -5.1104 20 14 14.1705 5.2839 -6.9927 21 6 11.8914 5.6731 -5.2863 22 6 10.8066 6.1191 -4.5537 23 6 10.1167 5.2444 -3.7372 24 8 5.4605 3.1643 2.0335 25 6 6.3656 2.6746 3.0248 26 6 4.1906 1.1237 1.3978 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 4.5113 3.0284 -0.9626 31 1 3.4166 3.4408 0.4268 32 1 7.1573 1.3764 1.0700 33 1 6.1879 0.8550 -0.3289 34 1 6.6731 3.6563 -0.4816 35 1 7.9933 3.9720 -2.8095 36 1 9.0743 4.3919 -1.4593 37 1 11.9228 2.4444 -4.3099 38 1 13.1584 3.0734 -6.6704 39 1 14.8082 4.0311 -4.4819 40 1 15.3374 4.8209 -7.7860 41 1 13.1269 5.8303 -7.8969 42 1 12.4269 6.3576 -5.9275 43 1 10.4958 7.1510 -4.6237 44 1 9.2663 5.5919 -3.1692 45 1 7.3478 2.5229 2.5769 46 1 6.4439 3.3993 3.8351 47 1 5.9959 1.7278 3.4186 48 1 3.5227 1.4152 2.2084 49 1 4.6597 0.1538 1.5639 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15102698_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:05:01 Heat of formation + Delta-G solvation = -165.456969 kcal Electronic energy + Delta-G solvation = -32492.924550 eV Core-core repulsion = 27775.064840 eV Total energy + Delta-G solvation = -4717.859711 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.28505 -41.54372 -40.92855 -40.16704 -38.92334 -37.75460 -37.23258 -36.89073 -35.56984 -32.46213 -31.83174 -30.43054 -29.38543 -28.08292 -27.95071 -26.88687 -26.63262 -25.41366 -23.66242 -22.61919 -22.11944 -21.53330 -20.17705 -19.32675 -19.28934 -18.55773 -18.17913 -17.75011 -17.54912 -17.49054 -17.30999 -16.99936 -16.78532 -16.68364 -16.20028 -16.07937 -15.99043 -15.94274 -15.36822 -15.26114 -14.87991 -14.63253 -14.54808 -14.35396 -14.19299 -14.01453 -13.82585 -13.61557 -13.35759 -13.28306 -13.07391 -12.91950 -12.74023 -12.61375 -12.58930 -12.11602 -12.07322 -11.99699 -11.88119 -11.67940 -11.64145 -11.44720 -11.14114 -10.64233 -10.50594 -10.30199 -9.91424 -9.28305 -4.98474 0.21044 0.39386 1.01040 1.27560 1.38969 1.42569 1.63661 1.65482 1.97381 2.46795 2.67899 2.73715 3.12226 3.18023 3.30709 3.40288 3.51784 3.56785 3.67702 3.83521 3.86948 4.00971 4.05112 4.07539 4.13297 4.22552 4.23547 4.25094 4.26701 4.35769 4.40767 4.48223 4.50092 4.54898 4.56785 4.62051 4.63756 4.67264 4.80423 4.83072 4.90203 4.98533 5.03671 5.17638 5.24920 5.29502 5.37530 5.45375 5.69276 6.09255 6.23723 6.40248 6.60178 6.75036 7.03238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.471 3.529 4 O -0.535 6.535 5 C -0.108 4.108 6 H 0.150 0.850 7 C -0.098 4.098 8 C 0.086 3.914 9 C 0.113 3.887 10 N -0.706 5.706 11 C 0.516 3.484 12 O -0.569 6.569 13 C 0.037 3.963 14 O -0.322 6.322 15 C 0.114 3.886 16 C -0.149 4.149 17 C -0.084 4.084 18 C -0.086 4.086 19 O -0.558 6.558 20 Si 0.795 3.205 21 C -0.158 4.158 22 C -0.070 4.070 23 C -0.203 4.203 24 O -0.376 6.376 25 C 0.020 3.980 26 C -0.131 4.131 27 H 0.128 0.872 28 H 0.061 0.939 29 H 0.061 0.939 30 H 0.103 0.897 31 H 0.097 0.903 32 H 0.077 0.923 33 H 0.090 0.910 34 H 0.420 0.580 35 H 0.125 0.875 36 H 0.125 0.875 37 H 0.112 0.888 38 H 0.101 0.899 39 H 0.395 0.605 40 H -0.302 1.302 41 H -0.280 1.280 42 H 0.149 0.851 43 H 0.162 0.838 44 H 0.160 0.840 45 H 0.047 0.953 46 H 0.096 0.904 47 H 0.054 0.946 48 H 0.096 0.904 49 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.893 5.591 2.800 6.533 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.127 4.127 6 H 0.167 0.833 7 C -0.135 4.135 8 C 0.046 3.954 9 C -0.010 4.010 10 N -0.360 5.360 11 C 0.303 3.697 12 O -0.447 6.447 13 C -0.041 4.041 14 O -0.235 6.235 15 C 0.069 3.931 16 C -0.168 4.168 17 C -0.085 4.085 18 C -0.194 4.194 19 O -0.366 6.366 20 Si 0.700 3.300 21 C -0.175 4.175 22 C -0.088 4.088 23 C -0.221 4.221 24 O -0.295 6.295 25 C -0.076 4.076 26 C -0.169 4.169 27 H 0.147 0.853 28 H 0.080 0.920 29 H 0.080 0.920 30 H 0.122 0.878 31 H 0.115 0.885 32 H 0.095 0.905 33 H 0.108 0.892 34 H 0.258 0.742 35 H 0.143 0.857 36 H 0.143 0.857 37 H 0.130 0.870 38 H 0.119 0.881 39 H 0.245 0.755 40 H -0.230 1.230 41 H -0.207 1.207 42 H 0.166 0.834 43 H 0.180 0.820 44 H 0.178 0.822 45 H 0.066 0.934 46 H 0.114 0.886 47 H 0.072 0.928 48 H 0.114 0.886 49 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -1.780 4.801 1.732 5.405 hybrid contribution -0.912 -0.702 0.185 1.166 sum -2.692 4.099 1.917 5.266 Atomic orbital electron populations 1.23539 0.74943 1.05657 1.02501 1.86514 1.24833 1.33075 1.83470 1.23888 0.92397 0.81067 0.71086 1.90680 1.67840 1.37381 1.46561 1.22437 0.86343 1.01522 1.02405 0.83260 1.23035 0.95802 0.94798 0.99912 1.22963 0.92174 0.91076 0.89233 1.21654 0.93592 0.90861 0.94929 1.45538 1.30755 1.14953 1.44794 1.20462 0.80258 0.89078 0.79951 1.90778 1.62616 1.25131 1.66169 1.22713 0.89409 0.95430 0.96525 1.86118 1.43288 1.37623 1.56489 1.19183 0.92554 0.89749 0.91605 1.20277 0.96100 1.00660 0.99756 1.20206 0.97068 0.94010 0.97215 1.25417 0.88439 1.08486 0.97088 1.86475 1.55615 1.43063 1.51454 0.93516 0.77158 0.79727 0.79598 1.21218 0.99574 0.94433 1.02300 1.21335 0.93359 1.00877 0.93233 1.21635 1.04148 0.91722 1.04610 1.88003 1.65693 1.40217 1.35586 1.22930 0.92450 1.00959 0.91282 1.23528 0.97500 1.01047 0.94810 0.85338 0.91992 0.91977 0.87829 0.88481 0.90477 0.89169 0.74186 0.85713 0.85716 0.87011 0.88136 0.75456 1.22994 1.20694 0.83404 0.82005 0.82246 0.93426 0.88558 0.92778 0.88562 0.87480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.78 10.56 -51.37 -0.54 -1.33 16 3 C 0.47 1.40 7.48 71.24 0.53 1.93 16 4 O -0.54 -4.92 15.65 21.95 0.34 -4.58 16 5 C -0.11 0.39 3.91 -11.02 -0.04 0.35 16 6 H 0.15 -1.09 7.67 -2.39 -0.02 -1.11 16 7 C -0.10 0.40 6.56 31.12 0.20 0.60 16 8 C 0.09 -0.42 0.89 -10.20 -0.01 -0.43 16 9 C 0.11 -0.47 4.82 86.38 0.42 -0.05 16 10 N -0.71 3.50 5.12 -463.06 -2.37 1.13 16 11 C 0.52 0.83 7.91 87.66 0.69 1.52 16 12 O -0.57 -7.30 16.49 16.00 0.26 -7.03 16 13 C 0.04 -0.12 5.22 71.24 0.37 0.25 16 14 O -0.32 -2.06 9.67 -73.42 -0.71 -2.77 16 15 C 0.11 0.46 6.69 22.50 0.15 0.61 16 16 C -0.15 -0.95 9.55 22.36 0.21 -0.74 16 17 C -0.08 -0.18 5.39 -19.88 -0.11 -0.29 16 18 C -0.09 -0.15 2.82 71.23 0.20 0.05 16 19 O -0.56 -1.72 12.77 -148.98 -1.90 -3.62 16 20 Si 0.79 -1.68 29.78 68.60 2.04 0.37 16 21 C -0.16 0.36 8.67 22.28 0.19 0.55 16 22 C -0.07 0.31 10.04 22.26 0.22 0.53 16 23 C -0.20 0.56 9.04 22.37 0.20 0.77 16 24 O -0.38 0.77 10.65 -148.98 -1.59 -0.82 16 25 C 0.02 -0.10 10.32 113.37 1.17 1.07 16 26 C -0.13 0.66 6.62 31.19 0.21 0.87 16 27 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 28 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 29 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 30 H 0.10 -0.76 7.54 -2.39 -0.02 -0.78 16 31 H 0.10 0.01 7.43 -2.39 -0.02 0.00 16 32 H 0.08 -0.20 6.38 -2.39 -0.02 -0.22 16 33 H 0.09 -0.34 7.35 -2.39 -0.02 -0.35 16 34 H 0.42 -4.26 8.10 -92.71 -0.75 -5.01 16 35 H 0.13 -1.20 7.65 -2.39 -0.02 -1.22 16 36 H 0.13 -1.18 7.67 -2.38 -0.02 -1.20 16 37 H 0.11 1.11 8.06 -2.91 -0.02 1.08 16 38 H 0.10 0.38 7.96 -2.38 -0.02 0.37 16 39 H 0.40 -2.18 8.70 -74.06 -0.64 -2.83 16 40 H -0.30 -1.70 7.11 99.48 0.71 -1.00 16 41 H -0.28 -0.45 7.11 99.48 0.71 0.26 16 42 H 0.15 -1.00 4.87 -2.91 -0.01 -1.02 16 43 H 0.16 -1.70 8.06 -2.91 -0.02 -1.73 16 44 H 0.16 -1.53 6.30 -2.91 -0.02 -1.54 16 45 H 0.05 -0.24 6.73 -2.38 -0.02 -0.25 16 46 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 47 H 0.05 -0.34 7.82 -2.39 -0.02 -0.35 16 48 H 0.10 -0.29 8.09 -2.39 -0.02 -0.31 16 49 H 0.11 -0.85 8.11 -2.38 -0.02 -0.87 16 Total: 0.00 -30.65 408.43 1.00 -29.65 By element: Atomic # 1 Polarization: -19.40 SS G_CDS: -0.35 Total: -19.76 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: 5.82 Total: 8.76 kcal Atomic # 7 Polarization: 3.50 SS G_CDS: -2.37 Total: 1.13 kcal Atomic # 8 Polarization: -16.01 SS G_CDS: -4.13 Total: -20.15 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: 2.04 Total: 0.37 kcal Total: -30.65 1.00 -29.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.805 kcal (2) G-P(sol) polarization free energy of solvation -30.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -166.459 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.652 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds