Wall clock time and date at job start Sun Mar 7 2021 01:05:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45209 * 1 3 3 C 1.34230 * 116.99861 * 2 1 4 4 O 1.20820 * 120.00056 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99996 * 179.97438 * 3 2 1 6 6 H 1.09013 * 112.90192 * 48.74934 * 5 3 2 7 7 C 1.53776 * 113.61594 * 180.02562 * 5 3 2 8 8 C 1.53779 * 87.07904 * 139.98444 * 7 5 3 9 9 C 1.53006 * 113.61597 * 89.11560 * 8 7 5 10 10 N 1.46507 * 109.46585 * 70.57412 * 9 8 7 11 11 C 1.34774 * 119.99414 * 175.16133 * 10 9 8 12 12 O 1.21279 * 120.00519 * 359.97438 * 11 10 9 13 13 C 1.50705 * 119.99813 * 179.97438 * 11 10 9 14 14 O 1.42899 * 109.47113 * 180.02562 * 13 11 10 15 15 C 1.35898 * 116.99554 * 180.02562 * 14 13 11 16 16 C 1.38756 * 120.02482 * 180.02562 * 15 14 13 17 17 C 1.50699 * 119.97073 * 359.97438 * 16 15 14 18 18 O 1.42902 * 109.46858 * 75.00773 * 17 16 15 19 19 Si 1.86303 * 109.46881 * 195.00200 * 17 16 15 20 20 C 1.38199 * 120.05629 * 179.97438 * 16 15 14 21 21 C 1.38152 * 120.10756 * 359.97438 * 20 16 15 22 22 C 1.38796 * 120.05431 * 0.02562 * 21 20 16 23 23 O 1.35904 * 120.02405 * 180.02562 * 22 21 20 24 24 C 1.42897 * 117.00475 * 359.97438 * 23 22 21 25 25 C 1.38606 * 119.94538 * 359.74236 * 22 21 20 26 26 O 1.42901 * 113.61679 * 219.93667 * 8 7 5 27 27 C 1.42902 * 114.00271 * 163.35185 * 26 8 7 28 28 C 1.53777 * 87.17656 * 334.52620 * 8 7 5 29 29 H 1.08996 * 109.47022 * 299.99629 * 1 2 3 30 30 H 1.09003 * 109.47311 * 59.99770 * 1 2 3 31 31 H 1.09000 * 109.46934 * 179.97438 * 1 2 3 32 32 H 1.08996 * 113.61413 * 25.44050 * 7 5 3 33 33 H 1.09002 * 113.69089 * 254.54021 * 7 5 3 34 34 H 1.08991 * 109.47414 * 310.57447 * 9 8 7 35 35 H 1.08998 * 109.47079 * 190.56519 * 9 8 7 36 36 H 0.97001 * 120.00142 * 355.15835 * 10 9 8 37 37 H 1.08998 * 109.47190 * 59.99518 * 13 11 10 38 38 H 1.09006 * 109.46965 * 299.99928 * 13 11 10 39 39 H 1.08999 * 109.47226 * 315.00105 * 17 16 15 40 40 H 0.96705 * 113.99945 * 180.02562 * 18 17 16 41 41 H 1.48492 * 110.00238 * 300.00058 * 19 17 16 42 42 H 1.48493 * 109.99911 * 61.32487 * 19 17 16 43 43 H 1.07991 * 119.94844 * 179.97438 * 20 16 15 44 44 H 1.07999 * 119.97321 * 180.02562 * 21 20 16 45 45 H 1.09003 * 109.46857 * 60.00198 * 24 23 22 46 46 H 1.08995 * 109.47405 * 179.97438 * 24 23 22 47 47 H 1.08998 * 109.47132 * 300.00869 * 24 23 22 48 48 H 1.08004 * 120.05879 * 180.25545 * 25 22 21 49 49 H 1.08996 * 109.46568 * 56.33830 * 27 26 8 50 50 H 1.09006 * 109.46924 * 176.33346 * 27 26 8 51 51 H 1.08995 * 109.47272 * 296.33509 * 27 26 8 52 52 H 1.09005 * 113.61882 * 140.02128 * 28 8 7 53 53 H 1.09002 * 113.61582 * 270.92771 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2749 0.0006 6 1 4.0250 0.6358 -0.7541 7 6 4.1078 2.7142 0.0011 8 6 5.1807 2.2265 0.9889 9 6 6.4440 1.6951 0.3086 10 7 7.1808 2.8099 -0.2921 11 6 8.3816 2.5933 -0.8644 12 8 8.8524 1.4758 -0.8818 13 6 9.1393 3.7399 -1.4829 14 8 10.3735 3.2604 -2.0204 15 6 11.1825 4.1743 -2.6179 16 6 12.3957 3.7772 -3.1617 17 6 12.8163 2.3320 -3.0888 18 8 12.0681 1.5698 -4.0382 19 14 14.6336 2.1939 -3.4754 20 6 13.2187 4.7060 -3.7700 21 6 12.8356 6.0315 -3.8388 22 6 11.6230 6.4337 -3.2964 23 8 11.2466 7.7378 -3.3649 24 6 12.1480 8.6404 -4.0089 25 6 10.7937 5.5033 -2.6900 26 8 5.4637 3.1597 2.0335 27 6 6.1571 2.5930 3.1471 28 6 4.1919 1.1229 1.4001 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 3.4172 3.4403 0.4301 33 1 4.5114 3.0307 -0.9607 34 1 6.1662 0.9827 -0.4681 35 1 7.0737 1.1998 1.0477 36 1 6.8043 3.7038 -0.2779 37 1 9.3422 4.4937 -0.7222 38 1 8.5426 4.1810 -2.2814 39 1 12.6281 1.9489 -2.0859 40 1 12.2870 0.6278 -4.0465 41 1 14.9034 2.7129 -4.8402 42 1 15.4247 2.9562 -2.4764 43 1 14.1628 4.3951 -4.1923 44 1 13.4803 6.7554 -4.3151 45 1 12.3019 8.3254 -5.0410 46 1 11.7272 9.6457 -3.9952 47 1 13.1023 8.6383 -3.4822 48 1 9.8478 5.8135 -2.2710 49 1 7.0809 2.1288 2.8018 50 1 6.3916 3.3776 3.8666 51 1 5.5278 1.8406 3.6223 52 1 4.6631 0.1541 1.5665 53 1 3.5243 1.4147 2.2108 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15102698_4974312.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:05:10 Heat of formation + Delta-G solvation = -198.179228 kcal Electronic energy + Delta-G solvation = -37527.330281 eV Core-core repulsion = 32333.831816 eV Total energy + Delta-G solvation = -5193.498466 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.180 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.27027 -41.89125 -41.07177 -40.43789 -39.74849 -38.23190 -37.73057 -37.03964 -36.84621 -35.55238 -32.50415 -31.71953 -30.54674 -29.43303 -28.50151 -28.12083 -27.89665 -26.67831 -26.11369 -25.51525 -23.76373 -22.46971 -22.11732 -21.65128 -20.19032 -19.99779 -19.29167 -18.57396 -18.38651 -18.13685 -17.92186 -17.54942 -17.50983 -17.47881 -16.92476 -16.87879 -16.78460 -16.64329 -16.22123 -16.08957 -15.91801 -15.66492 -15.46151 -15.32453 -15.12717 -14.58863 -14.48479 -14.33834 -14.13278 -13.94935 -13.86671 -13.66733 -13.50106 -13.40858 -13.26371 -13.24654 -13.02239 -12.71964 -12.61381 -12.56106 -12.47601 -12.07616 -11.99819 -11.93266 -11.87044 -11.74831 -11.60439 -11.42426 -11.12961 -10.65309 -10.27890 -10.21003 -9.83967 -9.23348 -4.93909 0.02916 0.16274 1.02200 1.31219 1.32694 1.39943 1.64218 1.64839 1.92774 2.12188 2.39465 2.42074 2.73683 3.13570 3.19173 3.32707 3.40053 3.45786 3.54989 3.57853 3.85015 3.86630 3.88511 3.99340 4.00056 4.09692 4.10543 4.19289 4.24670 4.26474 4.27293 4.28459 4.31473 4.32670 4.37665 4.49835 4.52430 4.56971 4.58000 4.63115 4.68286 4.68924 4.81122 4.83621 4.87729 4.89562 5.04984 5.07468 5.13185 5.20297 5.30006 5.30697 6.01425 6.09260 6.22841 6.36191 6.61526 6.92842 7.03597 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.471 3.529 4 O -0.536 6.536 5 C -0.107 4.107 6 H 0.154 0.846 7 C -0.100 4.100 8 C 0.085 3.915 9 C 0.117 3.883 10 N -0.705 5.705 11 C 0.520 3.480 12 O -0.560 6.560 13 C 0.031 3.969 14 O -0.295 6.295 15 C 0.181 3.819 16 C -0.166 4.166 17 C -0.072 4.072 18 O -0.563 6.563 19 Si 0.778 3.222 20 C -0.057 4.057 21 C -0.241 4.241 22 C 0.166 3.834 23 O -0.325 6.325 24 C 0.015 3.985 25 C -0.248 4.248 26 O -0.378 6.378 27 C 0.022 3.978 28 C -0.131 4.131 29 H 0.061 0.939 30 H 0.061 0.939 31 H 0.129 0.871 32 H 0.095 0.905 33 H 0.102 0.898 34 H 0.092 0.908 35 H 0.077 0.923 36 H 0.419 0.581 37 H 0.121 0.879 38 H 0.120 0.880 39 H 0.068 0.932 40 H 0.397 0.603 41 H -0.281 1.281 42 H -0.285 1.285 43 H 0.135 0.865 44 H 0.155 0.845 45 H 0.066 0.934 46 H 0.122 0.878 47 H 0.067 0.933 48 H 0.161 0.839 49 H 0.046 0.954 50 H 0.094 0.906 51 H 0.053 0.947 52 H 0.109 0.891 53 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.453 -0.409 1.426 1.551 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.315 3.685 4 O -0.426 6.426 5 C -0.126 4.126 6 H 0.171 0.829 7 C -0.137 4.137 8 C 0.045 3.955 9 C -0.006 4.006 10 N -0.360 5.360 11 C 0.306 3.694 12 O -0.438 6.438 13 C -0.047 4.047 14 O -0.207 6.207 15 C 0.135 3.865 16 C -0.167 4.167 17 C -0.181 4.181 18 O -0.372 6.372 19 Si 0.682 3.318 20 C -0.074 4.074 21 C -0.260 4.260 22 C 0.120 3.880 23 O -0.238 6.238 24 C -0.079 4.079 25 C -0.267 4.267 26 O -0.296 6.296 27 C -0.074 4.074 28 C -0.169 4.169 29 H 0.080 0.920 30 H 0.080 0.920 31 H 0.147 0.853 32 H 0.113 0.887 33 H 0.121 0.879 34 H 0.110 0.890 35 H 0.095 0.905 36 H 0.256 0.744 37 H 0.139 0.861 38 H 0.138 0.862 39 H 0.086 0.914 40 H 0.247 0.753 41 H -0.208 1.208 42 H -0.212 1.212 43 H 0.152 0.848 44 H 0.172 0.828 45 H 0.084 0.916 46 H 0.140 0.860 47 H 0.086 0.914 48 H 0.179 0.821 49 H 0.065 0.935 50 H 0.112 0.888 51 H 0.072 0.928 52 H 0.128 0.872 53 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.799 0.154 1.201 1.451 hybrid contribution -0.883 0.850 0.207 1.243 sum -0.084 1.004 1.409 1.732 Atomic orbital electron populations 1.23538 0.74984 1.05664 1.02452 1.86517 1.24786 1.33019 1.83468 1.23905 0.92428 0.81059 0.71065 1.90681 1.67869 1.37454 1.46586 1.22520 0.86299 1.01374 1.02415 0.82864 1.23040 0.95823 0.94873 0.99985 1.22961 0.92107 0.91165 0.89317 1.21634 0.91616 0.89289 0.98098 1.45491 1.18766 1.13372 1.58349 1.20214 0.81577 0.89388 0.78221 1.90765 1.68604 1.25859 1.58579 1.22770 0.84955 0.95892 1.01091 1.86188 1.29935 1.34377 1.70151 1.18478 0.89536 0.87260 0.91245 1.18939 0.95119 0.95913 1.06747 1.24762 1.08926 0.88932 0.95479 1.86451 1.66290 1.25049 1.59436 0.94153 0.71835 0.89029 0.76771 1.20754 0.98402 0.92890 0.95401 1.21336 0.98493 0.97334 1.08795 1.18814 0.92209 0.84126 0.92888 1.86061 1.47589 1.15255 1.74911 1.23419 0.94101 0.92985 0.97353 1.20628 1.04094 0.90735 1.11245 1.87974 1.77436 1.35563 1.28670 1.22899 0.95889 1.00291 0.88319 1.23536 0.97395 1.01090 0.94862 0.92049 0.92034 0.85282 0.88682 0.87909 0.88962 0.90511 0.74382 0.86105 0.86237 0.91427 0.75318 1.20782 1.21227 0.84797 0.82779 0.91586 0.86006 0.91444 0.82132 0.93493 0.88767 0.92823 0.87222 0.88554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.74 10.57 -51.41 -0.54 -1.28 16 3 C 0.47 1.43 7.49 71.24 0.53 1.97 16 4 O -0.54 -5.15 15.65 21.98 0.34 -4.81 16 5 C -0.11 0.39 3.91 -10.92 -0.04 0.35 16 6 H 0.15 -1.22 7.59 -2.38 -0.02 -1.24 16 7 C -0.10 0.34 6.77 31.12 0.21 0.55 16 8 C 0.08 -0.37 0.78 -10.27 -0.01 -0.38 16 9 C 0.12 -0.43 4.75 86.38 0.41 -0.02 16 10 N -0.71 2.37 5.47 -463.05 -2.53 -0.16 16 11 C 0.52 1.60 7.91 87.66 0.69 2.30 16 12 O -0.56 -7.15 16.50 16.01 0.26 -6.88 16 13 C 0.03 0.00 5.22 71.24 0.37 0.37 16 14 O -0.29 -2.57 8.99 -73.36 -0.66 -3.23 16 15 C 0.18 1.55 6.66 22.49 0.15 1.70 16 16 C -0.17 -1.56 5.31 -19.75 -0.10 -1.67 16 17 C -0.07 -0.45 2.36 71.24 0.17 -0.28 16 18 O -0.56 -4.01 12.86 -148.98 -1.92 -5.93 16 19 Si 0.78 0.85 30.19 68.60 2.07 2.92 16 20 C -0.06 -0.42 8.65 22.24 0.19 -0.22 16 21 C -0.24 -1.16 9.04 22.38 0.20 -0.96 16 22 C 0.17 0.92 6.68 22.49 0.15 1.07 16 23 O -0.33 -1.15 10.49 -92.47 -0.97 -2.12 16 24 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 25 C -0.25 -1.27 8.97 22.46 0.20 -1.07 16 26 O -0.38 0.50 10.59 -148.98 -1.58 -1.08 16 27 C 0.02 -0.09 10.62 113.37 1.20 1.12 16 28 C -0.13 0.67 6.25 31.21 0.20 0.87 16 29 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 30 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 31 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 32 H 0.09 0.10 7.43 -2.39 -0.02 0.09 16 33 H 0.10 -0.64 8.10 -2.39 -0.02 -0.65 16 34 H 0.09 -0.41 7.30 -2.39 -0.02 -0.43 16 35 H 0.08 -0.14 6.87 -2.39 -0.02 -0.16 16 36 H 0.42 -3.22 8.46 -92.71 -0.78 -4.01 16 37 H 0.12 -0.65 7.67 -2.39 -0.02 -0.66 16 38 H 0.12 -0.58 7.65 -2.38 -0.02 -0.60 16 39 H 0.07 0.44 7.82 -2.39 -0.02 0.42 16 40 H 0.40 -1.15 8.74 -74.05 -0.65 -1.80 16 41 H -0.28 -1.61 6.74 99.48 0.67 -0.94 16 42 H -0.29 -1.67 7.11 99.48 0.71 -0.96 16 43 H 0.13 0.73 4.89 -2.91 -0.01 0.72 16 44 H 0.15 -0.06 6.29 -2.91 -0.02 -0.08 16 45 H 0.07 -0.32 7.66 -2.39 -0.02 -0.34 16 46 H 0.12 -0.90 8.14 -2.39 -0.02 -0.92 16 47 H 0.07 -0.35 7.66 -2.39 -0.02 -0.37 16 48 H 0.16 -0.07 6.30 -2.91 -0.02 -0.08 16 49 H 0.05 -0.19 6.68 -2.39 -0.02 -0.21 16 50 H 0.09 -0.47 8.14 -2.38 -0.02 -0.49 16 51 H 0.05 -0.29 7.66 -2.39 -0.02 -0.31 16 52 H 0.11 -0.92 8.10 -2.38 -0.02 -0.94 16 53 H 0.10 -0.31 8.10 -2.39 -0.02 -0.33 16 Total: 0.00 -30.89 438.58 0.86 -30.03 By element: Atomic # 1 Polarization: -14.90 SS G_CDS: -0.46 Total: -15.36 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: 6.84 Total: 7.89 kcal Atomic # 7 Polarization: 2.37 SS G_CDS: -2.53 Total: -0.16 kcal Atomic # 8 Polarization: -20.27 SS G_CDS: -5.06 Total: -25.33 kcal Atomic # 14 Polarization: 0.85 SS G_CDS: 2.07 Total: 2.92 kcal Total: -30.89 0.86 -30.03 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_4974312.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.147 kcal (2) G-P(sol) polarization free energy of solvation -30.894 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -199.041 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.862 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.032 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.179 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds