Wall clock time and date at job start Sun Mar 7 2021 01:05:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34224 * 117.00344 * 2 1 4 4 O 1.20831 * 120.00091 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00232 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.84727 * 311.19350 * 5 3 2 7 7 C 1.53778 * 113.69099 * 82.46123 * 5 3 2 8 8 C 1.53778 * 87.08420 * 139.99452 * 7 5 3 9 9 C 1.52999 * 113.61663 * 89.11191 * 8 7 5 10 10 N 1.46511 * 109.47046 * 77.32039 * 9 8 7 11 11 C 1.34767 * 119.99874 * 184.87206 * 10 9 8 12 12 O 1.21703 * 120.00735 * 359.97438 * 11 10 9 13 13 C 1.46589 * 119.99802 * 179.97438 * 11 10 9 14 14 C 1.36648 * 125.45676 * 179.97438 * 13 11 10 15 15 C 1.37478 * 113.29528 * 179.73495 * 14 13 11 16 16 C 1.50691 * 122.44866 * 180.02562 * 15 14 13 17 17 C 1.33823 * 115.09835 * 0.02562 * 15 14 13 18 18 C 1.50697 * 124.51686 * 180.02562 * 17 15 14 19 19 O 1.42906 * 109.47017 * 313.74489 * 18 17 15 20 20 Si 1.86298 * 109.46775 * 193.75013 * 18 17 15 21 21 S 1.70611 * 110.95733 * 359.97438 * 17 15 14 22 22 O 1.42900 * 113.69246 * 220.00859 * 8 7 5 23 23 C 1.42904 * 113.99766 * 171.97250 * 22 8 7 24 24 C 1.53782 * 113.61673 * 179.97438 * 5 3 2 25 25 H 1.09002 * 109.47467 * 300.01134 * 1 2 3 26 26 H 1.09008 * 109.46510 * 60.00525 * 1 2 3 27 27 H 1.09002 * 109.47673 * 180.02562 * 1 2 3 28 28 H 1.09000 * 113.61687 * 25.44417 * 7 5 3 29 29 H 1.09011 * 113.61610 * 254.54147 * 7 5 3 30 30 H 1.09005 * 109.47323 * 317.32265 * 9 8 7 31 31 H 1.09005 * 109.47519 * 197.31947 * 9 8 7 32 32 H 0.96994 * 119.99648 * 4.86740 * 10 9 8 33 33 H 1.07995 * 123.35383 * 359.73981 * 14 13 11 34 34 H 1.09008 * 109.47345 * 96.01827 * 16 15 14 35 35 H 1.08998 * 109.47337 * 216.01494 * 16 15 14 36 36 H 1.09001 * 109.47678 * 336.01941 * 16 15 14 37 37 H 1.08992 * 109.47645 * 73.74857 * 18 17 15 38 38 H 0.96703 * 113.99722 * 300.00275 * 19 18 17 39 39 H 1.48499 * 110.00431 * 58.67747 * 20 18 17 40 40 H 1.48499 * 110.00164 * 179.97438 * 20 18 17 41 41 H 1.09000 * 109.46713 * 185.40061 * 23 22 8 42 42 H 1.09001 * 109.47325 * 305.39649 * 23 22 8 43 43 H 1.08998 * 109.47007 * 65.40209 * 23 22 8 44 44 H 1.08995 * 113.61607 * 105.38415 * 24 5 3 45 45 H 1.08998 * 113.61059 * 334.48328 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2747 0.0006 6 1 4.0233 0.6364 0.7568 7 6 4.1936 1.1223 -1.3952 8 6 5.1829 2.2258 -0.9849 9 6 6.4446 1.6948 -0.3016 10 7 7.3514 1.1429 -1.3114 11 6 8.4883 0.5270 -0.9315 12 8 8.7621 0.4297 0.2503 13 6 9.3952 -0.0258 -1.9418 14 6 10.5726 -0.6693 -1.6830 15 6 11.2225 -1.0914 -2.8185 16 6 12.5385 -1.8241 -2.7718 17 6 10.6009 -0.8042 -3.9683 18 6 11.1224 -1.1673 -5.3347 19 8 12.5085 -0.8304 -5.4206 20 14 10.1730 -0.2257 -6.6320 21 16 9.1388 0.0267 -3.6806 22 8 5.4681 3.1585 -2.0293 23 6 6.2400 4.2849 -1.6078 24 6 4.1078 2.7141 -0.0001 25 1 -0.3634 0.5140 0.8899 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3634 -1.0276 0.0005 28 1 3.5274 1.4130 -2.2074 29 1 4.6643 0.1528 -1.5589 30 1 6.1722 0.9135 0.4080 31 1 6.9415 2.5084 0.2269 32 1 7.1333 1.2207 -2.2533 33 1 10.9545 -0.8302 -0.6857 34 1 12.3585 -2.8980 -2.8217 35 1 13.1543 -1.5193 -3.6179 36 1 13.0547 -1.5851 -1.8420 37 1 10.9977 -2.2376 -5.4987 38 1 12.6941 0.1088 -5.2846 39 1 10.3088 1.2349 -6.4007 40 1 10.6780 -0.5744 -7.9842 41 1 6.3323 4.9912 -2.4328 42 1 5.7446 4.7709 -0.7672 43 1 7.2317 3.9518 -1.3019 44 1 4.5092 3.0301 0.9627 45 1 3.4182 3.4398 -0.4311 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:05:43 Heat of formation + Delta-G solvation = -130.347463 kcal Electronic energy + Delta-G solvation = -29586.921236 eV Core-core repulsion = 25278.418426 eV Total energy + Delta-G solvation = -4308.502810 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.122 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.25902 -41.04744 -40.37957 -39.65873 -37.68253 -37.53076 -36.88629 -35.47872 -32.35695 -30.20929 -30.01199 -28.72311 -28.25879 -26.98470 -26.32174 -25.37925 -24.18649 -22.11753 -21.73726 -20.52009 -20.10142 -19.34849 -19.13003 -18.14714 -17.84156 -17.47084 -17.39315 -16.96256 -16.80717 -16.61372 -16.37196 -16.31744 -16.10518 -15.71829 -15.52639 -14.99519 -14.73085 -14.52009 -14.45151 -14.25619 -13.95951 -13.88221 -13.60175 -13.54546 -13.35147 -13.16603 -13.03145 -12.90922 -12.82792 -12.67093 -12.38952 -12.37022 -12.15427 -11.79823 -11.78337 -11.65409 -11.42069 -11.19945 -10.83714 -10.75026 -10.31367 -9.78351 -9.43127 -5.22574 -0.63861 0.27316 0.66895 1.04693 1.11758 1.29882 1.45400 1.63697 1.78965 1.85144 2.15169 2.59162 3.04102 3.11157 3.15771 3.22379 3.29320 3.51216 3.72233 3.85239 3.96179 4.11754 4.15335 4.18435 4.23515 4.28696 4.30754 4.34276 4.38911 4.42539 4.48795 4.51521 4.55887 4.58730 4.62513 4.71979 4.76424 4.79420 4.84872 4.93717 5.02321 5.17237 5.36054 5.37680 5.43877 5.96699 6.16459 6.30166 6.70565 7.04192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.111 4.111 6 H 0.132 0.868 7 C -0.100 4.100 8 C 0.075 3.925 9 C 0.114 3.886 10 N -0.722 5.722 11 C 0.593 3.407 12 O -0.525 6.525 13 C -0.261 4.261 14 C -0.048 4.048 15 C -0.088 4.088 16 C -0.108 4.108 17 C -0.238 4.238 18 C -0.031 4.031 19 O -0.517 6.517 20 Si 0.653 3.347 21 S 0.201 5.799 22 O -0.363 6.363 23 C 0.024 3.976 24 C -0.133 4.133 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.104 0.896 28 H 0.104 0.896 29 H 0.094 0.906 30 H 0.091 0.909 31 H 0.080 0.920 32 H 0.405 0.595 33 H 0.155 0.845 34 H 0.070 0.930 35 H 0.091 0.909 36 H 0.064 0.936 37 H 0.129 0.871 38 H 0.379 0.621 39 H -0.241 1.241 40 H -0.233 1.233 41 H 0.091 0.909 42 H 0.048 0.952 43 H 0.045 0.955 44 H 0.087 0.913 45 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.430 -1.036 -2.388 2.970 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.316 3.684 4 O -0.388 6.388 5 C -0.130 4.130 6 H 0.150 0.850 7 C -0.138 4.138 8 C 0.035 3.965 9 C -0.010 4.010 10 N -0.374 5.374 11 C 0.380 3.620 12 O -0.403 6.403 13 C -0.381 4.381 14 C -0.081 4.081 15 C -0.102 4.102 16 C -0.166 4.166 17 C -0.357 4.357 18 C -0.143 4.143 19 O -0.324 6.324 20 Si 0.551 3.449 21 S 0.470 5.530 22 O -0.281 6.281 23 C -0.072 4.072 24 C -0.171 4.171 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.123 0.877 29 H 0.113 0.887 30 H 0.109 0.891 31 H 0.098 0.902 32 H 0.240 0.760 33 H 0.172 0.828 34 H 0.089 0.911 35 H 0.109 0.891 36 H 0.083 0.917 37 H 0.146 0.854 38 H 0.227 0.773 39 H -0.165 1.165 40 H -0.156 1.156 41 H 0.109 0.891 42 H 0.066 0.934 43 H 0.064 0.936 44 H 0.106 0.894 45 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -2.621 -0.265 -3.447 4.339 hybrid contribution 1.800 0.093 1.230 2.182 sum -0.821 -0.172 -2.217 2.370 Atomic orbital electron populations 1.23337 0.75815 1.04067 1.02759 1.86512 1.23803 1.33154 1.83775 1.23332 0.91373 0.81504 0.72235 1.90697 1.66878 1.36423 1.44836 1.22329 0.88177 1.00980 1.01477 0.85034 1.23028 0.96609 0.98741 0.95388 1.23077 0.92431 0.91324 0.89703 1.21660 0.88744 0.99570 0.90997 1.45655 1.21880 1.59180 1.10730 1.16931 0.80234 0.77468 0.87392 1.90869 1.74209 1.58120 1.17073 1.24573 1.02670 1.13777 0.97068 1.20737 0.92171 0.94881 1.00343 1.18716 0.99499 1.01337 0.90609 1.20751 0.92553 0.99453 1.03856 1.24358 1.02034 1.08675 1.00682 1.24403 0.86604 1.07131 0.96116 1.86591 1.21876 1.30911 1.93052 0.95396 0.88674 0.80762 0.80116 1.82795 1.18989 1.52127 0.99097 1.87984 1.73269 1.33443 1.33454 1.22826 0.94678 0.88256 1.01439 1.23564 0.97316 0.95337 1.00841 0.91716 0.91690 0.87785 0.87733 0.88724 0.89134 0.90225 0.75954 0.82783 0.91131 0.89093 0.91652 0.85368 0.77280 1.16475 1.15640 0.89101 0.93360 0.93632 0.89439 0.86784 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.34 10.56 -39.24 -0.41 -0.76 16 3 C 0.47 0.64 7.49 36.00 0.27 0.91 16 4 O -0.50 -2.14 15.65 -18.75 -0.29 -2.44 16 5 C -0.11 0.17 3.91 -90.96 -0.36 -0.19 16 6 H 0.13 -0.42 7.61 -51.93 -0.40 -0.81 16 7 C -0.10 0.21 7.05 -25.92 -0.18 0.03 16 8 C 0.08 -0.13 0.89 -89.83 -0.08 -0.21 16 9 C 0.11 -0.14 4.34 -4.04 -0.02 -0.16 16 10 N -0.72 0.37 5.47 -61.64 -0.34 0.04 16 11 C 0.59 1.26 7.78 -12.90 -0.10 1.16 16 12 O -0.53 -2.93 16.84 5.19 0.09 -2.84 16 13 C -0.26 -0.27 6.45 -36.79 -0.24 -0.51 16 14 C -0.05 -0.06 9.78 -40.43 -0.40 -0.46 16 15 C -0.09 -0.03 5.75 -106.45 -0.61 -0.64 16 16 C -0.11 0.04 9.74 36.00 0.35 0.39 16 17 C -0.24 0.15 5.61 -35.86 -0.20 -0.05 16 18 C -0.03 0.05 2.68 36.00 0.10 0.14 16 19 O -0.52 0.35 10.27 -35.23 -0.36 -0.01 16 20 Si 0.65 -1.26 30.97 -169.99 -5.26 -6.52 16 21 S 0.20 -0.27 19.34 -107.50 -2.08 -2.35 16 22 O -0.36 0.21 10.23 -35.23 -0.36 -0.15 16 23 C 0.02 -0.04 10.40 101.05 1.05 1.01 16 24 C -0.13 0.19 6.28 -25.94 -0.16 0.03 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.06 -0.05 8.13 -51.92 -0.42 -0.48 16 27 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 28 H 0.10 -0.16 8.10 -51.93 -0.42 -0.58 16 29 H 0.09 -0.30 8.10 -51.92 -0.42 -0.72 16 30 H 0.09 -0.13 7.31 -51.93 -0.38 -0.51 16 31 H 0.08 -0.07 7.29 -51.93 -0.38 -0.45 16 32 H 0.40 -0.72 7.31 -40.82 -0.30 -1.02 16 33 H 0.15 0.19 8.06 -52.49 -0.42 -0.23 16 34 H 0.07 -0.04 8.14 -51.92 -0.42 -0.46 16 35 H 0.09 -0.02 5.55 -51.93 -0.29 -0.31 16 36 H 0.06 -0.05 8.10 -51.93 -0.42 -0.47 16 37 H 0.13 -0.29 7.96 -51.93 -0.41 -0.70 16 38 H 0.38 -1.19 8.70 45.56 0.40 -0.80 16 39 H -0.24 0.01 7.11 56.52 0.40 0.41 16 40 H -0.23 -0.20 7.11 56.52 0.40 0.20 16 41 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 42 H 0.05 -0.11 7.72 -51.93 -0.40 -0.51 16 43 H 0.05 -0.08 7.10 -51.93 -0.37 -0.45 16 44 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 45 H 0.11 0.02 7.44 -51.93 -0.39 -0.36 16 LS Contribution 387.37 15.07 5.84 5.84 Total: 0.00 -8.45 387.37 -9.02 -17.47 By element: Atomic # 1 Polarization: -4.43 SS G_CDS: -6.33 Total: -10.76 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: 0.49 Total: 2.48 kcal Atomic # 7 Polarization: 0.37 SS G_CDS: -0.34 Total: 0.04 kcal Atomic # 8 Polarization: -4.86 SS G_CDS: -1.34 Total: -6.20 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.26 Total: -6.52 kcal Atomic # 16 Polarization: -0.27 SS G_CDS: -2.08 Total: -2.35 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -8.45 -9.02 -17.47 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.873 kcal (2) G-P(sol) polarization free energy of solvation -8.452 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.325 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.022 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds