Wall clock time and date at job start Sun Mar 7 2021 03:24:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34705 * 116.99953 * 2 1 4 4 O 1.21477 * 120.00129 * 359.97438 * 3 2 1 5 5 C 1.47729 * 120.00245 * 180.02562 * 3 2 1 6 6 C 1.39604 * 120.15038 * 183.10235 * 5 3 2 7 7 C 1.50694 * 120.07868 * 359.97438 * 6 5 3 8 8 H 1.09004 * 112.91003 * 327.77670 * 7 6 5 9 9 C 1.53790 * 113.61445 * 99.02681 * 7 6 5 10 10 C 1.53780 * 87.17429 * 139.94164 * 9 7 6 11 11 H 1.08995 * 113.61477 * 220.06330 * 10 9 7 12 12 N 1.46499 * 113.61466 * 89.15781 * 10 9 7 13 13 C 1.34776 * 119.99744 * 155.00293 * 12 10 9 14 14 O 1.21690 * 120.00030 * 5.29222 * 13 12 10 15 15 C 1.46679 * 119.99666 * 185.30195 * 13 12 10 16 16 C 1.37876 * 126.23592 * 4.98598 * 15 13 12 17 17 C 1.39833 * 107.08586 * 179.97438 * 16 15 13 18 18 C 1.50699 * 126.06818 * 179.97438 * 17 16 15 19 19 O 1.42895 * 109.47151 * 64.99735 * 18 17 16 20 20 Si 1.86303 * 109.47078 * 184.99961 * 18 17 16 21 21 C 1.35453 * 107.86539 * 0.02562 * 17 16 15 22 22 N 1.35541 * 108.87339 * 359.76765 * 21 17 16 23 23 C 1.46494 * 125.68003 * 180.26463 * 22 21 17 24 24 C 1.53783 * 113.61662 * 196.52233 * 7 6 5 25 25 C 1.37970 * 119.84495 * 179.72463 * 6 5 3 26 26 C 1.38343 * 120.14923 * 0.24741 * 25 6 5 27 27 C 1.38384 * 120.30597 * 0.04739 * 26 25 6 28 28 C 1.37920 * 120.14939 * 0.02562 * 27 26 25 29 29 H 1.09004 * 109.46772 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.47346 * 300.00037 * 1 2 3 31 31 H 1.08997 * 109.47470 * 60.00276 * 1 2 3 32 32 H 1.08996 * 113.61008 * 254.53405 * 9 7 6 33 33 H 1.08994 * 113.60905 * 25.34878 * 9 7 6 34 34 H 0.97000 * 119.99985 * 334.99763 * 12 10 9 35 35 H 1.07995 * 126.45701 * 0.02562 * 16 15 13 36 36 H 1.09002 * 109.46504 * 304.99733 * 18 17 16 37 37 H 0.96699 * 114.00019 * 60.00143 * 19 18 17 38 38 H 1.48503 * 109.99757 * 179.97438 * 20 18 17 39 39 H 1.48492 * 110.00001 * 301.31635 * 20 18 17 40 40 H 1.08000 * 125.56759 * 180.02562 * 21 17 16 41 41 H 1.09001 * 109.47246 * 264.10621 * 23 22 21 42 42 H 1.09002 * 109.47136 * 24.10387 * 23 22 21 43 43 H 1.08994 * 109.47341 * 144.10445 * 23 22 21 44 44 H 1.08998 * 113.61484 * 334.57196 * 24 7 6 45 45 H 1.09003 * 113.61359 * 105.38799 * 24 7 6 46 46 H 1.08006 * 119.92108 * 180.27390 * 25 6 5 47 47 H 1.08004 * 119.84761 * 180.02562 * 26 25 6 48 48 H 1.07999 * 119.92454 * 179.97438 * 27 26 25 49 49 H 1.08004 * 120.07824 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0636 1.2002 0.0000 4 8 1.4020 2.2190 -0.0005 5 6 3.5388 1.2776 -0.0006 6 6 4.1759 2.5181 0.0648 7 6 3.3603 3.7832 0.1355 8 1 2.4149 3.7093 -0.4019 9 6 3.2167 4.3448 1.5601 10 6 3.3978 5.7427 0.9454 11 1 4.0180 6.4071 1.5470 12 7 2.1410 6.3645 0.5211 13 6 2.0453 7.7067 0.4452 14 8 3.0282 8.3986 0.6352 15 6 0.7562 8.3335 0.1337 16 6 -0.4521 7.6849 -0.0088 17 6 -1.4101 8.6606 -0.3013 18 6 -2.8782 8.4189 -0.5408 19 8 -3.4818 7.9278 0.6577 20 14 -3.6973 10.0162 -1.0393 21 6 -0.7842 9.8615 -0.3323 22 7 0.5317 9.6770 -0.0648 23 6 1.5465 10.7316 0.0001 24 6 4.1616 5.0524 -0.1993 25 6 5.5541 2.5827 0.0696 26 6 6.3044 1.4222 0.0047 27 6 5.6793 0.1896 -0.0664 28 6 4.3024 0.1106 -0.0736 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 2.2306 4.1836 1.9955 33 1 4.0272 4.0531 2.2280 34 1 1.3778 5.8102 0.2948 35 1 -0.6260 6.6235 0.0882 36 1 -3.0002 7.6841 -1.3366 37 1 -3.4110 8.5316 1.4097 38 1 -5.1454 9.7911 -1.2790 39 1 -3.5105 11.0361 0.0236 40 1 -1.2571 10.8114 -0.5329 41 1 2.0581 10.8031 -0.9597 42 1 1.0670 11.6836 0.2280 43 1 2.2692 10.4929 0.7802 44 1 5.2311 4.9554 -0.0128 45 1 3.9393 5.4618 -1.1848 46 1 6.0483 3.5415 0.1245 47 1 7.3829 1.4785 0.0092 48 1 6.2710 -0.7124 -0.1173 49 1 3.8157 -0.8520 -0.1287 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15105874_10803934.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:24:13 Heat of formation + Delta-G solvation = -31.128033 kcal Electronic energy + Delta-G solvation = -33512.278590 eV Core-core repulsion = 28987.503871 eV Total energy + Delta-G solvation = -4524.774719 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.161 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.52480 -41.96793 -40.85691 -39.83828 -38.62353 -37.74037 -37.39356 -34.79485 -33.71606 -32.63416 -32.00818 -30.59670 -28.76007 -28.33352 -26.78156 -26.45090 -25.63786 -24.80310 -24.05094 -22.75231 -21.87352 -21.21832 -20.55739 -20.02271 -19.03558 -18.79741 -18.06714 -17.75443 -17.32068 -17.23822 -16.80047 -16.71964 -16.58767 -16.17851 -15.87481 -15.67315 -15.53100 -15.48968 -15.16182 -15.02243 -14.80432 -14.53574 -14.32587 -14.15508 -13.97868 -13.72101 -13.50169 -13.45070 -13.30568 -13.19952 -13.17318 -13.07214 -12.94377 -12.45496 -12.34814 -12.29415 -11.77554 -11.73524 -11.69648 -11.38247 -11.00848 -10.75952 -10.40059 -10.10248 -10.04367 -9.78434 -9.66004 -9.22094 -4.91322 -0.34005 0.27580 0.49390 1.36661 1.55042 1.57958 1.59337 1.65745 1.69647 2.02948 2.34834 2.41386 2.69183 3.43270 3.53402 3.56497 3.67391 3.69372 3.76801 3.80637 3.84165 3.91734 3.94672 4.02281 4.14925 4.21386 4.22448 4.25524 4.30728 4.31690 4.36050 4.40335 4.57447 4.65327 4.67640 4.70267 4.74604 4.75390 4.83416 4.86858 4.93678 4.98191 5.04321 5.14823 5.22263 5.22983 5.30430 5.39530 5.51481 5.68600 5.75532 5.79295 5.93843 6.15675 6.53963 6.56328 6.75951 7.23716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.356 6.356 3 C 0.510 3.490 4 O -0.500 6.500 5 C -0.130 4.130 6 C -0.003 4.003 7 C -0.092 4.092 8 H 0.135 0.865 9 C -0.129 4.129 10 C 0.127 3.873 11 H 0.106 0.894 12 N -0.700 5.700 13 C 0.594 3.406 14 O -0.547 6.547 15 C -0.054 4.054 16 C -0.111 4.111 17 C -0.206 4.206 18 C -0.038 4.038 19 O -0.532 6.532 20 Si 0.681 3.319 21 C 0.027 3.973 22 N -0.404 5.404 23 C 0.065 3.935 24 C -0.151 4.151 25 C -0.135 4.135 26 C -0.077 4.077 27 C -0.139 4.139 28 C -0.059 4.059 29 H 0.103 0.897 30 H 0.065 0.935 31 H 0.065 0.935 32 H 0.079 0.921 33 H 0.095 0.905 34 H 0.407 0.593 35 H 0.146 0.854 36 H 0.114 0.886 37 H 0.374 0.626 38 H -0.258 1.258 39 H -0.261 1.261 40 H 0.173 0.827 41 H 0.080 0.920 42 H 0.086 0.914 43 H 0.102 0.898 44 H 0.096 0.904 45 H 0.076 0.924 46 H 0.137 0.863 47 H 0.131 0.869 48 H 0.132 0.868 49 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.801 -1.520 -1.621 2.860 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.272 6.272 3 C 0.356 3.644 4 O -0.389 6.389 5 C -0.131 4.131 6 C -0.004 4.004 7 C -0.109 4.109 8 H 0.153 0.847 9 C -0.167 4.167 10 C 0.022 3.978 11 H 0.124 0.876 12 N -0.351 5.351 13 C 0.382 3.618 14 O -0.426 6.426 15 C -0.167 4.167 16 C -0.137 4.137 17 C -0.212 4.212 18 C -0.148 4.148 19 O -0.338 6.338 20 Si 0.582 3.418 21 C -0.110 4.110 22 N -0.076 5.076 23 C -0.075 4.075 24 C -0.189 4.189 25 C -0.152 4.152 26 C -0.095 4.095 27 C -0.157 4.157 28 C -0.077 4.077 29 H 0.122 0.878 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.097 0.903 33 H 0.113 0.887 34 H 0.242 0.758 35 H 0.163 0.837 36 H 0.132 0.868 37 H 0.221 0.779 38 H -0.183 1.183 39 H -0.186 1.186 40 H 0.190 0.810 41 H 0.098 0.902 42 H 0.104 0.896 43 H 0.120 0.880 44 H 0.114 0.886 45 H 0.095 0.905 46 H 0.155 0.845 47 H 0.149 0.851 48 H 0.150 0.850 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.829 -0.373 -1.623 2.474 hybrid contribution -0.513 -0.573 1.022 1.280 sum 1.316 -0.946 -0.601 1.728 Atomic orbital electron populations 1.23327 0.75461 1.04064 1.02835 1.86543 1.23933 1.32604 1.84132 1.21236 0.89095 0.81497 0.72578 1.90712 1.66876 1.35276 1.46062 1.18944 0.89028 0.94555 1.10606 1.19814 0.93740 0.93164 0.93637 1.22224 1.00302 0.89795 0.98627 0.84739 1.23290 1.03532 0.93920 0.95939 1.21795 0.85584 0.93865 0.96579 0.87627 1.45308 1.15212 1.05756 1.68784 1.16941 0.86262 0.82194 0.76370 1.90798 1.38197 1.62545 1.51040 1.20006 0.95155 0.83963 1.17539 1.21222 0.90216 0.99230 1.03052 1.19721 0.96409 0.92806 1.12305 1.24281 0.90343 1.10028 0.90190 1.86589 1.79226 1.47234 1.20712 0.95318 0.81661 0.76201 0.88621 1.21884 0.83086 0.99701 1.06307 1.43809 1.07844 1.06067 1.49886 1.22326 0.91290 0.88826 1.05106 1.23695 0.99920 0.95494 0.99837 1.21145 0.92705 0.99332 1.02067 1.21501 1.00589 0.92343 0.95088 1.21208 0.94351 0.98367 1.01730 1.21496 0.94047 0.97865 0.94292 0.87816 0.91616 0.91601 0.90267 0.88668 0.75750 0.83672 0.86781 0.77872 1.18309 1.18563 0.81029 0.90151 0.89559 0.87983 0.88629 0.90544 0.84523 0.85115 0.84981 0.84399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.51 9.82 -40.50 -0.40 -0.90 16 3 C 0.51 1.20 7.87 34.61 0.27 1.47 16 4 O -0.50 -1.72 12.98 -19.25 -0.25 -1.97 16 5 C -0.13 -0.19 5.87 -104.98 -0.62 -0.80 16 6 C 0.00 0.00 5.34 -104.21 -0.56 -0.56 16 7 C -0.09 -0.05 2.83 -90.96 -0.26 -0.30 16 8 H 0.14 0.26 5.46 -51.93 -0.28 -0.02 16 9 C -0.13 0.00 7.37 -25.91 -0.19 -0.19 16 10 C 0.13 0.09 4.30 -67.02 -0.29 -0.20 16 11 H 0.11 0.17 7.53 -51.93 -0.39 -0.22 16 12 N -0.70 -0.85 5.24 -54.23 -0.28 -1.14 16 13 C 0.59 2.02 7.77 -12.85 -0.10 1.92 16 14 O -0.55 -3.22 14.43 5.20 0.07 -3.15 16 15 C -0.05 -0.14 6.89 -81.98 -0.56 -0.71 16 16 C -0.11 -0.19 10.28 -39.12 -0.40 -0.59 16 17 C -0.21 -0.20 5.43 -105.02 -0.57 -0.77 16 18 C -0.04 -0.01 3.02 36.01 0.11 0.10 16 19 O -0.53 -1.05 12.88 -35.23 -0.45 -1.50 16 20 Si 0.68 -0.56 30.60 -169.99 -5.20 -5.76 16 21 C 0.03 0.01 9.92 -16.91 -0.17 -0.16 16 22 N -0.40 -0.62 3.16 -120.24 -0.38 -1.00 16 23 C 0.07 -0.02 10.47 59.84 0.63 0.61 16 24 C -0.15 0.01 7.16 -25.82 -0.18 -0.18 16 25 C -0.13 0.08 9.27 -39.64 -0.37 -0.29 16 26 C -0.08 0.09 10.04 -39.49 -0.40 -0.30 16 27 C -0.14 0.14 10.03 -39.64 -0.40 -0.26 16 28 C -0.06 0.00 9.62 -39.17 -0.38 -0.38 16 29 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.09 -0.07 8.09 -51.93 -0.42 -0.49 16 34 H 0.41 0.01 7.65 -40.82 -0.31 -0.30 16 35 H 0.15 0.08 7.49 -52.49 -0.39 -0.31 16 36 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 37 H 0.37 -0.26 8.70 45.56 0.40 0.13 16 38 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 39 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 40 H 0.17 -0.41 6.21 -52.49 -0.33 -0.74 16 41 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 42 H 0.09 -0.24 8.12 -51.93 -0.42 -0.66 16 43 H 0.10 0.14 6.57 -51.93 -0.34 -0.20 16 44 H 0.10 -0.12 5.68 -51.93 -0.29 -0.42 16 45 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 46 H 0.14 -0.29 5.72 -52.48 -0.30 -0.59 16 47 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 48 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 49 H 0.14 -0.15 7.62 -52.48 -0.40 -0.55 16 LS Contribution 405.13 15.07 6.11 6.11 Total: 0.00 -8.77 405.13 -10.63 -19.40 By element: Atomic # 1 Polarization: -3.02 SS G_CDS: -6.48 Total: -9.50 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: -3.36 Total: -0.58 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -0.66 Total: -2.14 kcal Atomic # 8 Polarization: -6.50 SS G_CDS: -1.03 Total: -7.52 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.20 Total: -5.76 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -8.77 -10.63 -19.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15105874_10803934.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.727 kcal (2) G-P(sol) polarization free energy of solvation -8.772 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.401 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds