Wall clock time and date at job start Sun Mar 7 2021 03:25:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34710 * 117.00148 * 2 1 4 4 O 1.21467 * 120.00179 * 0.02562 * 3 2 1 5 5 C 1.47730 * 119.99787 * 180.02562 * 3 2 1 6 6 C 1.39608 * 120.14598 * 154.10791 * 5 3 2 7 7 C 1.50706 * 120.07648 * 359.97191 * 6 5 3 8 8 H 1.08996 * 112.85076 * 342.18409 * 7 6 5 9 9 C 1.53784 * 113.61213 * 113.37789 * 7 6 5 10 10 C 1.53782 * 87.07789 * 139.98111 * 9 7 6 11 11 H 1.09004 * 113.61468 * 219.93153 * 10 9 7 12 12 N 1.46506 * 113.61350 * 89.12187 * 10 9 7 13 13 C 1.34766 * 120.00235 * 154.99973 * 12 10 9 14 14 O 1.21569 * 120.00037 * 359.71747 * 13 12 10 15 15 C 1.47696 * 120.00157 * 179.97438 * 13 12 10 16 16 C 1.39799 * 120.15584 * 179.45090 * 15 13 12 17 17 F 1.35100 * 120.08831 * 359.97015 * 16 15 13 18 18 C 1.38321 * 119.83199 * 179.71969 * 16 15 13 19 19 C 1.38183 * 120.14262 * 0.55391 * 18 16 15 20 20 C 1.50697 * 119.84198 * 179.74430 * 19 18 16 21 21 O 1.42906 * 109.46801 * 254.97640 * 20 19 18 22 22 Si 1.86300 * 109.47388 * 14.97240 * 20 19 18 23 23 C 1.38661 * 120.31594 * 359.72108 * 19 18 16 24 24 F 1.35098 * 119.91883 * 179.97438 * 23 19 18 25 25 C 1.38069 * 120.16544 * 359.97438 * 23 19 18 26 26 C 1.53774 * 113.61418 * 210.87314 * 7 6 5 27 27 C 1.37963 * 119.84737 * 179.70482 * 6 5 3 28 28 C 1.38343 * 120.15060 * 0.25378 * 27 6 5 29 29 C 1.38395 * 120.30166 * 0.02562 * 28 27 6 30 30 C 1.37918 * 120.14877 * 0.02562 * 29 28 27 31 31 H 1.09004 * 109.47553 * 179.97438 * 1 2 3 32 32 H 1.09006 * 109.47135 * 299.99352 * 1 2 3 33 33 H 1.09000 * 109.47374 * 59.99116 * 1 2 3 34 34 H 1.09000 * 113.61455 * 25.43463 * 9 7 6 35 35 H 1.08998 * 113.61400 * 254.53193 * 9 7 6 36 36 H 0.97003 * 119.99039 * 334.99443 * 12 10 9 37 37 H 1.07997 * 119.92930 * 180.24724 * 18 16 15 38 38 H 1.08994 * 109.47581 * 134.97898 * 20 19 18 39 39 H 0.96698 * 114.00436 * 60.00314 * 21 20 19 40 40 H 1.48501 * 110.00243 * 180.02562 * 22 20 19 41 41 H 1.48503 * 110.00068 * 301.32617 * 22 20 19 42 42 H 1.07999 * 120.07500 * 179.97438 * 25 23 19 43 43 H 1.09010 * 113.61273 * 105.47268 * 26 7 6 44 44 H 1.08995 * 113.62398 * 334.57463 * 26 7 6 45 45 H 1.07998 * 119.92381 * 180.26773 * 27 6 5 46 46 H 1.07994 * 119.84977 * 180.02562 * 28 27 6 47 47 H 1.07996 * 119.92366 * 179.97438 * 29 28 27 48 48 H 1.08000 * 120.07625 * 179.97438 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0636 1.2003 0.0000 4 8 1.4021 2.2190 0.0005 5 6 3.5388 1.2775 -0.0006 6 6 4.1820 2.3988 -0.5278 7 6 3.3729 3.5347 -1.0990 8 1 2.3462 3.2495 -1.3285 9 6 3.4840 4.8379 -0.2902 10 6 3.5255 5.5781 -1.6375 11 1 4.2328 6.4072 -1.6587 12 7 2.2017 5.9467 -2.1455 13 6 2.0705 6.9868 -2.9925 14 8 3.0500 7.6223 -3.3310 15 6 0.7360 7.3580 -3.5050 16 6 0.5948 8.4434 -4.3747 17 9 1.6792 9.1570 -4.7490 18 6 -0.6574 8.7817 -4.8553 19 6 -1.7682 8.0565 -4.4685 20 6 -3.1300 8.4346 -4.9916 21 8 -3.8709 9.0907 -3.9607 22 14 -2.9397 9.5827 -6.4464 23 6 -1.6359 6.9824 -3.6016 24 9 -2.7274 6.2794 -3.2282 25 6 -0.3913 6.6296 -3.1190 26 6 4.0786 4.2783 -2.2452 27 6 5.5599 2.4672 -0.5196 28 6 6.3042 1.4255 0.0046 29 6 5.6732 0.3084 0.5236 30 6 4.2965 0.2266 0.5207 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3634 0.5138 0.8901 33 1 -0.3634 0.5140 -0.8899 34 1 4.4085 4.9195 0.2814 35 1 2.5973 5.0605 0.3032 36 1 1.4196 5.4421 -1.8722 37 1 -0.7678 9.6174 -5.5304 38 1 -3.6612 7.5359 -5.3051 39 1 -3.4564 9.9004 -3.6329 40 1 -4.2757 9.9635 -6.9711 41 1 -2.1891 10.7978 -6.0396 42 1 -0.2899 5.7930 -2.4436 43 1 3.6717 4.0491 -3.2302 44 1 5.1655 4.2069 -2.2082 45 1 6.0586 3.3359 -0.9232 46 1 7.3826 1.4843 0.0089 47 1 6.2603 -0.5014 0.9309 48 1 3.8053 -0.6458 0.9257 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15105874_12360598.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:25:27 Heat of formation + Delta-G solvation = -136.486996 kcal Electronic energy + Delta-G solvation = -37878.327480 eV Core-core repulsion = 32502.813491 eV Total energy + Delta-G solvation = -5375.513989 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.131 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -50.14349 -50.13727 -42.14191 -41.47396 -40.57303 -39.86085 -38.79332 -37.78682 -37.52446 -34.95549 -33.29496 -32.59091 -31.69421 -31.42240 -28.74374 -28.02518 -26.77241 -26.31676 -24.87186 -24.45534 -24.11919 -22.92710 -22.05627 -21.85138 -20.32057 -19.76747 -19.07192 -18.86399 -18.58015 -18.17753 -17.98498 -17.56881 -17.44361 -17.21894 -16.89043 -16.77117 -16.61359 -16.28865 -16.15006 -16.02756 -15.91607 -15.65735 -15.60636 -15.34024 -15.19652 -14.91566 -14.68656 -14.49441 -14.20467 -14.13515 -14.01928 -13.85744 -13.52151 -13.25239 -13.18877 -13.16142 -12.99361 -12.91556 -12.47471 -12.44868 -12.27900 -11.93699 -11.82465 -11.78886 -11.45256 -11.30707 -11.03561 -10.80712 -10.64624 -10.24548 -10.04032 -9.86756 -9.73977 -4.96740 -0.86105 -0.35477 -0.29339 0.32644 1.14326 1.33056 1.37184 1.53312 1.68863 1.77490 1.90261 2.18266 2.68982 2.74374 2.79766 3.06604 3.20773 3.36496 3.41524 3.46530 3.54802 3.63751 3.69171 3.74057 3.86412 3.94982 4.10588 4.13105 4.18045 4.25246 4.28163 4.29701 4.35138 4.38117 4.42646 4.47994 4.60019 4.65161 4.66750 4.68925 4.71112 4.79357 4.81385 4.87327 4.96887 5.02042 5.07214 5.23129 5.30541 5.33289 5.39386 5.47882 5.60769 5.87792 6.23595 6.37210 6.60868 6.91368 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.361 6.361 3 C 0.505 3.495 4 O -0.518 6.518 5 C -0.147 4.147 6 C -0.020 4.020 7 C -0.085 4.085 8 H 0.106 0.894 9 C -0.118 4.118 10 C 0.117 3.883 11 H 0.099 0.901 12 N -0.693 5.693 13 C 0.561 3.439 14 O -0.556 6.556 15 C -0.148 4.148 16 C 0.144 3.856 17 F -0.122 7.122 18 C -0.128 4.128 19 C -0.089 4.089 20 C -0.089 4.089 21 O -0.540 6.540 22 Si 0.776 3.224 23 C 0.104 3.896 24 F -0.128 7.128 25 C -0.081 4.081 26 C -0.140 4.140 27 C -0.133 4.133 28 C -0.079 4.079 29 C -0.138 4.138 30 C -0.070 4.070 31 H 0.128 0.872 32 H 0.063 0.937 33 H 0.064 0.936 34 H 0.109 0.891 35 H 0.075 0.925 36 H 0.412 0.588 37 H 0.175 0.825 38 H 0.132 0.868 39 H 0.390 0.610 40 H -0.293 1.293 41 H -0.268 1.268 42 H 0.171 0.829 43 H 0.068 0.932 44 H 0.112 0.888 45 H 0.152 0.848 46 H 0.155 0.845 47 H 0.153 0.847 48 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.555 -5.322 0.239 5.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.277 6.277 3 C 0.352 3.648 4 O -0.409 6.409 5 C -0.148 4.148 6 C -0.020 4.020 7 C -0.103 4.103 8 H 0.124 0.876 9 C -0.156 4.156 10 C 0.012 3.988 11 H 0.117 0.883 12 N -0.345 5.345 13 C 0.349 3.651 14 O -0.434 6.434 15 C -0.152 4.152 16 C 0.123 3.877 17 F -0.100 7.100 18 C -0.146 4.146 19 C -0.090 4.090 20 C -0.197 4.197 21 O -0.348 6.348 22 Si 0.678 3.322 23 C 0.084 3.916 24 F -0.107 7.107 25 C -0.100 4.100 26 C -0.178 4.178 27 C -0.151 4.151 28 C -0.097 4.097 29 C -0.155 4.155 30 C -0.088 4.088 31 H 0.146 0.854 32 H 0.082 0.918 33 H 0.083 0.917 34 H 0.128 0.872 35 H 0.094 0.906 36 H 0.250 0.750 37 H 0.192 0.808 38 H 0.150 0.850 39 H 0.240 0.760 40 H -0.220 1.220 41 H -0.195 1.195 42 H 0.188 0.812 43 H 0.087 0.913 44 H 0.130 0.870 45 H 0.169 0.831 46 H 0.173 0.827 47 H 0.171 0.829 48 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 1.452 -4.329 -0.389 4.582 hybrid contribution -0.914 0.209 1.347 1.641 sum 0.538 -4.120 0.958 4.264 Atomic orbital electron populations 1.23555 0.74399 1.05702 1.02706 1.86572 1.25110 1.32245 1.83800 1.21531 0.89631 0.81501 0.72179 1.90743 1.67427 1.36234 1.46525 1.19101 0.88639 0.98235 1.08858 1.19857 0.94452 0.92901 0.94776 1.21907 0.99787 0.91899 0.96668 0.87648 1.23286 1.04197 0.92783 0.95307 1.21911 0.84399 0.97338 0.95155 0.88278 1.45515 1.10758 1.31777 1.46439 1.18034 0.87777 0.80367 0.78958 1.90860 1.40211 1.53274 1.59101 1.19798 0.94155 0.98660 1.02576 1.17750 0.83874 0.90591 0.95491 1.91608 1.53184 1.76078 1.89139 1.21123 0.89056 1.02285 1.02174 1.20461 0.97166 0.94515 0.96883 1.25357 0.89149 1.06030 0.99158 1.86656 1.50056 1.43372 1.54762 0.93806 0.80197 0.78514 0.79640 1.17347 0.83142 0.92862 0.98236 1.91568 1.52268 1.77097 1.89721 1.21300 0.89132 1.00147 0.99404 1.23628 1.02054 0.94280 0.97861 1.21277 0.92090 1.00656 1.01054 1.21820 1.01850 0.92376 0.93645 1.21500 0.93914 0.99647 1.00462 1.21597 0.94775 0.96654 0.95759 0.85397 0.91778 0.91672 0.87228 0.90631 0.75028 0.80849 0.85037 0.76004 1.22047 1.19461 0.81155 0.91327 0.86970 0.83086 0.82747 0.82936 0.83948 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -1.07 10.12 -56.20 -0.57 -1.63 16 3 C 0.51 2.53 7.46 70.33 0.52 3.05 16 4 O -0.52 -3.89 13.63 19.94 0.27 -3.62 16 5 C -0.15 -0.40 5.86 -20.10 -0.12 -0.52 16 6 C -0.02 -0.01 5.31 -19.60 -0.10 -0.12 16 7 C -0.08 0.00 3.01 -11.01 -0.03 -0.04 16 8 H 0.11 0.31 5.49 -2.39 -0.01 0.30 16 9 C -0.12 0.15 7.32 31.12 0.23 0.38 16 10 C 0.12 0.05 4.33 45.51 0.20 0.25 16 11 H 0.10 0.31 7.46 -2.39 -0.02 0.29 16 12 N -0.69 -0.66 5.21 -443.06 -2.31 -2.97 16 13 C 0.56 3.52 7.77 86.74 0.67 4.19 16 14 O -0.56 -7.90 14.93 -3.93 -0.06 -7.96 16 15 C -0.15 -0.41 5.88 -20.06 -0.12 -0.52 16 16 C 0.14 0.52 7.28 22.67 0.17 0.69 16 17 F -0.12 -1.11 15.55 44.97 0.70 -0.41 16 18 C -0.13 0.21 8.62 22.28 0.19 0.40 16 19 C -0.09 0.15 5.27 -19.78 -0.10 0.05 16 20 C -0.09 0.23 2.44 71.23 0.17 0.40 16 21 O -0.54 -0.42 12.88 -148.98 -1.92 -2.34 16 22 Si 0.78 -3.57 30.23 68.60 2.07 -1.50 16 23 C 0.10 0.00 7.23 22.33 0.16 0.16 16 24 F -0.13 -0.37 16.73 44.97 0.75 0.39 16 25 C -0.08 0.12 9.52 22.57 0.21 0.33 16 26 C -0.14 0.17 7.24 31.12 0.23 0.39 16 27 C -0.13 0.40 8.93 22.23 0.20 0.60 16 28 C -0.08 0.37 10.04 22.33 0.22 0.59 16 29 C -0.14 0.52 10.03 22.23 0.22 0.74 16 30 C -0.07 0.04 9.61 22.53 0.22 0.25 16 31 H 0.13 -0.95 8.14 -2.38 -0.02 -0.97 16 32 H 0.06 -0.12 8.14 -2.38 -0.02 -0.14 16 33 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 34 H 0.11 -0.38 7.93 -2.39 -0.02 -0.40 16 35 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 36 H 0.41 -1.24 6.73 -92.71 -0.62 -1.86 16 37 H 0.17 -0.90 4.83 -2.91 -0.01 -0.91 16 38 H 0.13 -0.46 7.89 -2.39 -0.02 -0.48 16 39 H 0.39 -2.20 8.70 -74.06 -0.64 -2.84 16 40 H -0.29 -0.87 7.11 99.48 0.71 -0.17 16 41 H -0.27 0.57 6.68 99.48 0.66 1.24 16 42 H 0.17 -1.04 6.41 -2.91 -0.02 -1.05 16 43 H 0.07 0.05 8.14 -2.38 -0.02 0.03 16 44 H 0.11 -0.47 6.02 -2.39 -0.01 -0.48 16 45 H 0.15 -1.04 6.29 -2.91 -0.02 -1.06 16 46 H 0.15 -1.48 8.06 -2.91 -0.02 -1.50 16 47 H 0.15 -1.26 8.06 -2.91 -0.02 -1.28 16 48 H 0.14 -0.39 7.86 -2.91 -0.02 -0.41 16 Total: 0.00 -22.62 409.20 3.08 -19.54 By element: Atomic # 1 Polarization: -11.71 SS G_CDS: -0.20 Total: -11.90 kcal Atomic # 6 Polarization: 8.08 SS G_CDS: 4.34 Total: 12.42 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -2.31 Total: -2.97 kcal Atomic # 8 Polarization: -13.28 SS G_CDS: -2.27 Total: -15.56 kcal Atomic # 9 Polarization: -1.47 SS G_CDS: 1.45 Total: -0.02 kcal Atomic # 14 Polarization: -3.57 SS G_CDS: 2.07 Total: -1.50 kcal Total: -22.62 3.08 -19.54 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15105874_12360598.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.950 kcal (2) G-P(sol) polarization free energy of solvation -22.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.537 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.487 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds