Wall clock time and date at job start Sun Mar 7 2021 03:26:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34704 * 117.00224 * 2 1 4 4 O 1.21472 * 120.00017 * 0.02562 * 3 2 1 5 5 C 1.47728 * 120.00087 * 179.97438 * 3 2 1 6 6 C 1.39609 * 120.14676 * 186.39457 * 5 3 2 7 7 C 1.50694 * 120.07962 * 0.02562 * 6 5 3 8 8 H 1.08997 * 112.85373 * 18.97461 * 7 6 5 9 9 C 1.53957 * 113.74734 * 150.18671 * 7 6 5 10 10 C 1.53782 * 87.02014 * 139.93941 * 9 7 6 11 11 H 1.09003 * 113.61183 * 220.04906 * 10 9 7 12 12 N 1.46495 * 113.61257 * 89.23365 * 10 9 7 13 13 C 1.34780 * 120.00528 * 105.86065 * 12 10 9 14 14 O 1.21548 * 119.99583 * 359.97438 * 13 12 10 15 15 C 1.47837 * 120.00214 * 179.97438 * 13 12 10 16 16 C 1.39515 * 120.55917 * 359.97438 * 15 13 12 17 17 N 1.31702 * 120.56847 * 180.02562 * 16 15 13 18 18 C 1.31931 * 121.87600 * 0.02562 * 17 16 15 19 19 C 1.38352 * 121.08093 * 359.97438 * 18 17 16 20 20 C 1.50698 * 120.34770 * 180.02562 * 19 18 17 21 21 O 1.42908 * 109.46799 * 120.00623 * 20 19 18 22 22 Si 1.86295 * 109.47236 * 0.02562 * 20 19 18 23 23 C 1.38358 * 119.30270 * 359.72802 * 19 18 17 24 24 C 1.53777 * 87.17255 * 334.64086 * 10 9 7 25 25 C 1.37966 * 119.84484 * 179.72088 * 6 5 3 26 26 C 1.38349 * 120.15149 * 0.30361 * 25 6 5 27 27 C 1.38394 * 120.30227 * 359.97438 * 26 25 6 28 28 C 1.37925 * 120.14813 * 0.02562 * 27 26 25 29 29 H 1.09000 * 109.47655 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.47118 * 299.99949 * 1 2 3 31 31 H 1.09004 * 109.47310 * 59.99971 * 1 2 3 32 32 H 1.09002 * 113.60683 * 25.42085 * 9 7 6 33 33 H 1.08999 * 113.66671 * 254.47214 * 9 7 6 34 34 H 0.97004 * 120.00137 * 285.85672 * 12 10 9 35 35 H 1.07997 * 119.71927 * 359.97438 * 16 15 13 36 36 H 1.08000 * 119.45581 * 179.97438 * 18 17 16 37 37 H 1.09000 * 109.47231 * 240.00232 * 20 19 18 38 38 H 0.96699 * 113.99799 * 180.02562 * 21 20 19 39 39 H 1.48498 * 109.99995 * 298.68108 * 22 20 19 40 40 H 1.48504 * 110.00126 * 59.99780 * 22 20 19 41 41 H 1.08001 * 120.85940 * 180.29169 * 23 19 18 42 42 H 1.09005 * 113.61537 * 139.94347 * 24 10 9 43 43 H 1.09004 * 113.61393 * 270.75456 * 24 10 9 44 44 H 1.08003 * 119.92911 * 180.27518 * 25 6 5 45 45 H 1.07991 * 119.85175 * 179.97438 * 26 25 6 46 46 H 1.07993 * 119.92640 * 179.97438 * 27 26 25 47 47 H 1.07997 * 120.07357 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0636 1.2002 0.0000 4 8 1.4021 2.2190 0.0005 5 6 3.5389 1.2775 0.0006 6 6 4.1762 2.5123 0.1350 7 6 3.3609 3.7712 0.2807 8 1 2.3350 3.5773 0.5937 9 6 4.0578 4.8693 1.1045 10 6 3.5010 5.8761 0.0841 11 1 4.2051 6.6655 -0.1792 12 7 2.1738 6.3901 0.4311 13 6 2.0388 7.6473 0.8978 14 8 3.0183 8.3545 1.0313 15 6 0.6993 8.1662 1.2475 16 6 -0.4329 7.3648 1.0984 17 7 -1.6263 7.8270 1.4093 18 6 -1.8014 9.0513 1.8686 19 6 -0.7294 9.9081 2.0449 20 6 -0.9483 11.3031 2.5712 21 8 -0.2222 11.4715 3.7905 22 14 -2.7646 11.5693 2.8887 23 6 0.5462 9.4685 1.7387 24 6 3.4681 4.7176 -0.9266 25 6 5.5544 2.5766 0.1406 26 6 6.3045 1.4218 0.0069 27 6 5.6791 0.1951 -0.1325 28 6 4.3021 0.1165 -0.1397 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 5.1453 4.7966 1.0973 33 1 3.6473 4.9913 2.1069 34 1 1.3921 5.8257 0.3250 35 1 -0.3301 6.3570 0.7240 36 1 -2.7977 9.3902 2.1110 37 1 -0.5975 12.0278 1.8364 38 1 -0.3174 12.3482 4.1870 39 1 -3.5275 11.4281 1.6225 40 1 -3.2546 10.5872 3.8891 41 1 1.4015 10.1146 1.8711 42 1 2.5822 4.7173 -1.5617 43 1 4.3936 4.6043 -1.4912 44 1 6.0489 3.5306 0.2490 45 1 7.3829 1.4778 0.0115 46 1 6.2705 -0.7024 -0.2368 47 1 3.8153 -0.8414 -0.2490 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15105874_13287814.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:26:47 Heat of formation + Delta-G solvation = -38.376347 kcal Electronic energy + Delta-G solvation = -32501.732841 eV Core-core repulsion = 28003.955290 eV Total energy + Delta-G solvation = -4497.777551 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.145 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.16414 -41.76615 -40.85129 -39.92560 -38.72237 -37.90263 -37.47356 -34.79647 -33.82218 -33.11825 -32.64879 -31.67942 -28.80568 -27.31450 -26.83374 -26.77369 -25.44853 -24.84977 -23.74772 -22.99725 -21.96441 -21.63645 -20.26501 -19.10665 -18.94154 -18.59823 -18.22143 -17.99733 -17.76368 -17.41927 -17.21565 -16.67159 -16.30870 -16.13669 -16.02617 -15.70893 -15.43070 -15.34676 -15.17800 -14.81755 -14.70428 -14.55247 -14.32990 -14.17230 -14.09650 -13.88772 -13.77648 -13.51714 -13.25450 -13.16025 -12.97938 -12.63568 -12.56373 -12.38843 -12.14484 -11.82696 -11.75061 -11.42425 -11.30898 -11.02417 -10.73134 -10.68768 -10.50358 -10.21684 -10.12613 -10.05773 -9.80582 -5.10041 -0.56794 -0.37292 0.00845 0.24544 1.12632 1.49192 1.53378 1.65212 1.73646 1.83286 1.96592 2.62249 2.65511 2.99549 3.19200 3.39531 3.50060 3.54427 3.62649 3.63556 3.70087 3.71772 3.76526 3.81587 3.90275 3.99048 4.06414 4.10465 4.18560 4.20709 4.21377 4.28301 4.33187 4.40092 4.53977 4.63828 4.65686 4.71518 4.79307 4.86206 4.88744 4.93214 4.93681 4.99796 5.09089 5.20325 5.26513 5.29737 5.36781 5.46693 5.71514 5.77627 6.38238 6.49615 6.62746 6.70845 7.10687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.354 6.354 3 C 0.511 3.489 4 O -0.500 6.500 5 C -0.131 4.131 6 C -0.002 4.002 7 C -0.105 4.105 8 H 0.142 0.858 9 C -0.148 4.148 10 C 0.123 3.877 11 H 0.108 0.892 12 N -0.706 5.706 13 C 0.569 3.431 14 O -0.527 6.527 15 C -0.186 4.186 16 C 0.139 3.861 17 N -0.476 5.476 18 C 0.122 3.878 19 C -0.134 4.134 20 C -0.069 4.069 21 O -0.544 6.544 22 Si 0.686 3.314 23 C 0.016 3.984 24 C -0.128 4.128 25 C -0.133 4.133 26 C -0.077 4.077 27 C -0.138 4.138 28 C -0.059 4.059 29 H 0.104 0.896 30 H 0.065 0.935 31 H 0.065 0.935 32 H 0.095 0.905 33 H 0.075 0.925 34 H 0.403 0.597 35 H 0.164 0.836 36 H 0.154 0.846 37 H 0.082 0.918 38 H 0.386 0.614 39 H -0.250 1.250 40 H -0.246 1.246 41 H 0.155 0.845 42 H 0.078 0.922 43 H 0.097 0.903 44 H 0.135 0.865 45 H 0.131 0.869 46 H 0.133 0.867 47 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.090 -0.543 -0.589 0.806 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.271 6.271 3 C 0.358 3.642 4 O -0.391 6.391 5 C -0.132 4.132 6 C -0.003 4.003 7 C -0.122 4.122 8 H 0.159 0.841 9 C -0.186 4.186 10 C 0.018 3.982 11 H 0.126 0.874 12 N -0.357 5.357 13 C 0.355 3.645 14 O -0.403 6.403 15 C -0.192 4.192 16 C -0.020 4.020 17 N -0.184 5.184 18 C -0.034 4.034 19 C -0.136 4.136 20 C -0.180 4.180 21 O -0.351 6.351 22 Si 0.587 3.413 23 C -0.011 4.011 24 C -0.166 4.166 25 C -0.151 4.151 26 C -0.095 4.095 27 C -0.156 4.156 28 C -0.077 4.077 29 H 0.123 0.877 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.113 0.887 33 H 0.094 0.906 34 H 0.239 0.761 35 H 0.181 0.819 36 H 0.171 0.829 37 H 0.100 0.900 38 H 0.235 0.765 39 H -0.174 1.174 40 H -0.170 1.170 41 H 0.172 0.828 42 H 0.097 0.903 43 H 0.115 0.885 44 H 0.153 0.847 45 H 0.149 0.851 46 H 0.151 0.849 47 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -0.988 -1.279 -0.768 1.789 hybrid contribution 0.620 -0.173 -0.222 0.681 sum -0.368 -1.452 -0.990 1.795 Atomic orbital electron populations 1.23339 0.75420 1.04140 1.02834 1.86549 1.23970 1.32517 1.84037 1.21258 0.89120 0.81452 0.72393 1.90626 1.66927 1.35157 1.46347 1.18939 0.88965 0.94722 1.10567 1.19806 0.93713 0.93099 0.93636 1.22539 1.02149 0.89860 0.97675 0.84053 1.23659 1.01094 0.94883 0.99006 1.21824 0.84648 0.95779 0.95979 0.87450 1.45577 1.09858 1.13991 1.66318 1.17946 0.87997 0.81542 0.76966 1.90808 1.39404 1.57383 1.52717 1.21033 0.94832 0.96808 1.06479 1.23064 0.86843 0.99228 0.92852 1.67716 1.25198 1.14200 1.11259 1.22690 0.98313 0.89075 0.93329 1.20419 0.94366 0.96576 1.02229 1.24606 1.09622 0.94426 0.89391 1.86492 1.72834 1.38619 1.37175 0.94936 0.73943 0.89784 0.82679 1.21603 0.97445 0.93650 0.88373 1.23298 1.03654 0.93567 0.96061 1.21076 0.92687 0.99322 1.01972 1.21503 1.00612 0.92362 0.95001 1.21212 0.94334 0.98416 1.01631 1.21490 0.94063 0.97775 0.94354 0.87746 0.91607 0.91578 0.88653 0.90618 0.76082 0.81946 0.82936 0.90046 0.76536 1.17449 1.17027 0.82771 0.90300 0.88505 0.84682 0.85074 0.84938 0.84390 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.35 -0.47 9.84 -40.50 -0.40 -0.87 16 3 C 0.51 1.16 7.85 34.61 0.27 1.43 16 4 O -0.50 -1.65 12.90 -19.24 -0.25 -1.89 16 5 C -0.13 -0.18 5.87 -104.98 -0.62 -0.80 16 6 C 0.00 0.00 5.31 -104.21 -0.55 -0.55 16 7 C -0.10 -0.05 3.15 -90.87 -0.29 -0.33 16 8 H 0.14 0.25 4.88 -52.67 -0.26 0.00 16 9 C -0.15 -0.02 7.25 -25.83 -0.19 -0.21 16 10 C 0.12 0.07 4.29 -67.12 -0.29 -0.22 16 11 H 0.11 0.17 7.50 -51.93 -0.39 -0.22 16 12 N -0.71 -0.64 5.22 -53.97 -0.28 -0.92 16 13 C 0.57 1.94 7.78 -12.33 -0.10 1.85 16 14 O -0.53 -3.51 16.04 5.32 0.09 -3.43 16 15 C -0.19 -0.52 5.89 -104.82 -0.62 -1.14 16 16 C 0.14 0.27 10.71 -17.13 -0.18 0.09 16 17 N -0.48 -1.75 10.35 -12.91 -0.13 -1.88 16 18 C 0.12 0.36 9.84 -17.47 -0.17 0.19 16 19 C -0.13 -0.31 5.43 -104.54 -0.57 -0.88 16 20 C -0.07 0.03 2.83 36.00 0.10 0.13 16 21 O -0.54 0.05 12.75 -35.23 -0.45 -0.40 16 22 Si 0.69 -1.21 29.82 -169.99 -5.07 -6.28 16 23 C 0.02 0.05 9.31 -38.87 -0.36 -0.31 16 24 C -0.13 0.05 7.32 -25.92 -0.19 -0.14 16 25 C -0.13 0.08 9.02 -39.64 -0.36 -0.28 16 26 C -0.08 0.10 10.04 -39.48 -0.40 -0.30 16 27 C -0.14 0.14 10.03 -39.64 -0.40 -0.25 16 28 C -0.06 0.00 9.62 -39.17 -0.38 -0.38 16 29 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 32 H 0.10 -0.10 5.98 -51.93 -0.31 -0.41 16 33 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 34 H 0.40 -0.34 6.77 -40.82 -0.28 -0.61 16 35 H 0.16 -0.15 6.42 -52.49 -0.34 -0.49 16 36 H 0.15 0.27 4.88 -52.49 -0.26 0.02 16 37 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 38 H 0.39 -2.02 8.74 45.56 0.40 -1.63 16 39 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 40 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 41 H 0.15 0.47 7.74 -52.49 -0.41 0.07 16 42 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 43 H 0.10 -0.12 7.99 -51.93 -0.41 -0.53 16 44 H 0.14 -0.30 6.21 -52.48 -0.33 -0.62 16 45 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 46 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 47 H 0.14 -0.16 7.63 -52.49 -0.40 -0.56 16 LS Contribution 392.75 15.07 5.92 5.92 Total: 0.00 -9.92 392.75 -10.33 -20.24 By element: Atomic # 1 Polarization: -3.88 SS G_CDS: -5.55 Total: -9.42 kcal Atomic # 6 Polarization: 3.14 SS G_CDS: -4.21 Total: -1.07 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -0.42 Total: -2.80 kcal Atomic # 8 Polarization: -5.58 SS G_CDS: -1.01 Total: -6.59 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.07 Total: -6.28 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -9.92 -10.33 -20.24 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15105874_13287814.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.133 kcal (2) G-P(sol) polarization free energy of solvation -9.916 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.376 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds