Wall clock time and date at job start Sun Mar 7 2021 03:27:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34709 * 116.99966 * 2 1 4 4 O 1.21465 * 119.99850 * 0.02562 * 3 2 1 5 5 C 1.47728 * 119.99842 * 180.02562 * 3 2 1 6 6 C 1.39608 * 120.15182 * 173.68233 * 5 3 2 7 7 C 1.50705 * 120.06979 * 359.97438 * 6 5 3 8 8 H 1.08997 * 112.84985 * 326.93029 * 7 6 5 9 9 C 1.53776 * 113.61714 * 98.13571 * 7 6 5 10 10 C 1.53778 * 87.08730 * 140.05942 * 9 7 6 11 11 H 1.08990 * 113.61597 * 219.93458 * 10 9 7 12 12 N 1.46501 * 113.61069 * 89.11148 * 10 9 7 13 13 C 1.34785 * 119.99753 * 155.00235 * 12 10 9 14 14 O 1.21698 * 119.99610 * 0.02562 * 13 12 10 15 15 C 1.46677 * 119.99907 * 179.97438 * 13 12 10 16 16 C 1.37866 * 126.23116 * 179.71428 * 15 13 12 17 17 C 1.50708 * 126.45629 * 0.02562 * 16 15 13 18 18 C 1.39832 * 107.08924 * 179.85218 * 16 15 13 19 19 C 1.35459 * 107.86039 * 0.41845 * 18 16 15 20 20 C 1.50695 * 125.56471 * 179.76487 * 19 18 16 21 21 O 1.42902 * 109.47563 * 119.97521 * 20 19 18 22 22 Si 1.86299 * 109.47343 * 359.97181 * 20 19 18 23 23 N 1.35535 * 108.87004 * 359.74148 * 19 18 16 24 24 C 1.53782 * 87.07750 * 334.56710 * 10 9 7 25 25 C 1.37959 * 119.85197 * 180.27374 * 6 5 3 26 26 C 1.38349 * 120.14913 * 359.49428 * 25 6 5 27 27 C 1.38391 * 120.30051 * 0.50665 * 26 25 6 28 28 C 1.37924 * 120.15072 * 359.74530 * 27 26 25 29 29 H 1.08997 * 109.47205 * 299.99345 * 1 2 3 30 30 H 1.09000 * 109.46918 * 59.99969 * 1 2 3 31 31 H 1.09011 * 109.47069 * 179.97438 * 1 2 3 32 32 H 1.09004 * 113.61633 * 254.61403 * 9 7 6 33 33 H 1.09008 * 113.61254 * 25.50891 * 9 7 6 34 34 H 0.96996 * 120.00673 * 335.00356 * 12 10 9 35 35 H 1.09003 * 109.46663 * 90.00266 * 17 16 15 36 36 H 1.08998 * 109.46739 * 209.99581 * 17 16 15 37 37 H 1.08995 * 109.47129 * 330.00290 * 17 16 15 38 38 H 1.07997 * 126.07461 * 180.16486 * 18 16 15 39 39 H 1.09006 * 109.47326 * 239.97353 * 20 19 18 40 40 H 0.96695 * 114.00286 * 179.97438 * 21 20 19 41 41 H 1.48497 * 110.00199 * 298.68607 * 22 20 19 42 42 H 1.48505 * 109.99656 * 60.00370 * 22 20 19 43 43 H 0.97001 * 125.67836 * 179.97438 * 23 19 18 44 44 H 1.08997 * 113.61767 * 270.88040 * 24 10 9 45 45 H 1.09004 * 113.61217 * 139.97735 * 24 10 9 46 46 H 1.08001 * 119.92515 * 179.74184 * 25 6 5 47 47 H 1.07997 * 119.84855 * 180.23486 * 26 25 6 48 48 H 1.08000 * 119.92481 * 179.77417 * 27 26 25 49 49 H 1.07993 * 120.07422 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0635 1.2003 0.0000 4 8 1.4020 2.2189 0.0005 5 6 3.5388 1.2776 -0.0006 6 6 4.1762 2.5125 -0.1334 7 6 3.3607 3.7716 -0.2774 8 1 2.4270 3.6118 -0.8165 9 6 3.1870 4.5470 1.0392 10 6 3.3801 5.8319 0.2167 11 1 3.9855 6.5856 0.7200 12 7 2.1322 6.3741 -0.3263 13 6 2.0369 7.6874 -0.6141 14 8 2.9877 8.4226 -0.4231 15 6 0.7877 8.2302 -1.1583 16 6 0.5479 9.5463 -1.4914 17 6 1.5177 10.6930 -1.3653 18 6 -0.7633 9.6162 -1.9721 19 6 -1.2931 8.3708 -1.9166 20 6 -2.6908 7.9934 -2.3349 21 8 -2.6290 7.0234 -3.3825 22 14 -3.5874 9.5087 -2.9437 23 7 -0.3608 7.5194 -1.4238 24 6 4.1689 4.9760 -0.7884 25 6 5.5543 2.5769 -0.1388 26 6 6.3044 1.4224 -0.0025 27 6 5.6790 0.1949 0.1296 28 6 4.3021 0.1156 0.1314 29 1 -0.3633 0.5137 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 -1.0278 -0.0005 32 1 2.1919 4.4521 1.4738 33 1 3.9840 4.3664 1.7607 34 1 1.3745 5.7880 -0.4789 35 1 2.0885 10.7893 -2.2890 36 1 0.9675 11.6155 -1.1803 37 1 2.1986 10.5033 -0.5356 38 1 -1.2660 10.5059 -2.3215 39 1 -3.2245 7.5735 -1.4822 40 1 -3.4945 6.7335 -3.7017 41 1 -3.6863 10.5125 -1.8538 42 1 -2.8698 10.0905 -4.1064 43 1 -0.4826 6.5676 -1.2816 44 1 5.2342 4.9128 -0.5668 45 1 3.9663 5.2276 -1.8295 46 1 6.0487 3.5311 -0.2457 47 1 7.3829 1.4788 -0.0036 48 1 6.2706 -0.7029 0.2320 49 1 3.8154 -0.8429 0.2350 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15105874_13940406.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:27:27 Heat of formation + Delta-G solvation = -43.286868 kcal Electronic energy + Delta-G solvation = -33591.068761 eV Core-core repulsion = 29065.766795 eV Total energy + Delta-G solvation = -4525.301966 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.161 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.55397 -42.01166 -40.90462 -39.87934 -38.67446 -37.75160 -37.44947 -34.74752 -33.37777 -32.67851 -32.15568 -31.38314 -28.82960 -28.12443 -27.23115 -26.82422 -25.98246 -24.84141 -23.34965 -22.39870 -21.90301 -21.51826 -20.42959 -20.05645 -19.40710 -19.03142 -18.57698 -18.09883 -17.44406 -17.32327 -16.87000 -16.69717 -16.31689 -16.18407 -15.79441 -15.71838 -15.44950 -15.20845 -14.97911 -14.96650 -14.67849 -14.55148 -14.39990 -14.15037 -13.79942 -13.74039 -13.54581 -13.47502 -13.23119 -13.18183 -13.15340 -13.02326 -12.99664 -12.48403 -12.43926 -12.29967 -11.97331 -11.82748 -11.74065 -11.41910 -10.95110 -10.87229 -10.56944 -10.13942 -10.09049 -9.83084 -9.77793 -9.08967 -5.04890 -0.37903 0.23815 0.41453 1.12110 1.49228 1.53529 1.64041 1.68757 1.98321 2.04212 2.15855 2.41295 2.64753 3.18963 3.38419 3.51322 3.62853 3.67211 3.74366 3.77726 3.86456 3.89809 3.98682 4.08139 4.10434 4.15786 4.16935 4.17704 4.27781 4.31621 4.39268 4.50782 4.63223 4.66394 4.71506 4.75242 4.82658 4.86457 4.91250 4.93706 4.99674 5.05680 5.10834 5.18295 5.24670 5.25859 5.36182 5.41061 5.49190 5.62718 5.72323 5.74955 5.93703 6.29389 6.42536 6.52193 6.69134 7.21304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.355 6.355 3 C 0.510 3.490 4 O -0.502 6.502 5 C -0.130 4.130 6 C -0.004 4.004 7 C -0.083 4.083 8 H 0.123 0.877 9 C -0.126 4.126 10 C 0.125 3.875 11 H 0.109 0.891 12 N -0.714 5.714 13 C 0.595 3.405 14 O -0.521 6.521 15 C -0.055 4.055 16 C -0.062 4.062 17 C -0.092 4.092 18 C -0.208 4.208 19 C 0.073 3.927 20 C -0.060 4.060 21 O -0.550 6.550 22 Si 0.717 3.283 23 N -0.521 5.521 24 C -0.153 4.153 25 C -0.134 4.134 26 C -0.077 4.077 27 C -0.138 4.138 28 C -0.059 4.059 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.104 0.896 32 H 0.078 0.922 33 H 0.096 0.904 34 H 0.397 0.603 35 H 0.070 0.930 36 H 0.063 0.937 37 H 0.083 0.917 38 H 0.142 0.858 39 H 0.076 0.924 40 H 0.387 0.613 41 H -0.252 1.252 42 H -0.247 1.247 43 H 0.418 0.582 44 H 0.098 0.902 45 H 0.075 0.925 46 H 0.138 0.862 47 H 0.132 0.868 48 H 0.133 0.867 49 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.016 -5.542 0.030 6.844 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.272 6.272 3 C 0.355 3.645 4 O -0.392 6.392 5 C -0.131 4.131 6 C -0.005 4.005 7 C -0.101 4.101 8 H 0.141 0.859 9 C -0.164 4.164 10 C 0.019 3.981 11 H 0.127 0.873 12 N -0.365 5.365 13 C 0.383 3.617 14 O -0.396 6.396 15 C -0.168 4.168 16 C -0.071 4.071 17 C -0.149 4.149 18 C -0.233 4.233 19 C -0.046 4.046 20 C -0.170 4.170 21 O -0.356 6.356 22 Si 0.616 3.384 23 N -0.117 5.117 24 C -0.191 4.191 25 C -0.152 4.152 26 C -0.095 4.095 27 C -0.156 4.156 28 C -0.077 4.077 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.122 0.878 32 H 0.097 0.903 33 H 0.114 0.886 34 H 0.231 0.769 35 H 0.088 0.912 36 H 0.082 0.918 37 H 0.102 0.898 38 H 0.160 0.840 39 H 0.094 0.906 40 H 0.235 0.765 41 H -0.176 1.176 42 H -0.172 1.172 43 H 0.255 0.745 44 H 0.116 0.884 45 H 0.094 0.906 46 H 0.155 0.845 47 H 0.150 0.850 48 H 0.151 0.849 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.836 -3.953 0.172 4.868 hybrid contribution -0.285 -1.347 0.290 1.407 sum -3.121 -5.300 0.463 6.168 Atomic orbital electron populations 1.23318 0.75542 1.04093 1.02701 1.86548 1.23871 1.32594 1.84154 1.21221 0.89107 0.81471 0.72655 1.90737 1.66955 1.35510 1.45949 1.18941 0.88999 0.94647 1.10560 1.19797 0.93778 0.93076 0.93835 1.22014 0.99425 0.89883 0.98775 0.85893 1.23271 1.03500 0.93546 0.96112 1.21787 0.85756 0.95307 0.95217 0.87311 1.45566 1.15862 1.08594 1.66434 1.16973 0.85871 0.81647 0.77213 1.90830 1.37560 1.58085 1.53172 1.20188 0.88214 0.92626 1.15777 1.19885 0.94790 0.92788 0.99592 1.20393 0.97202 0.93972 1.03370 1.20448 0.95809 0.96186 1.10851 1.19910 0.91058 0.90236 1.03347 1.24545 0.94893 1.04040 0.93489 1.86478 1.34903 1.60658 1.53610 0.95235 0.86458 0.75150 0.81603 1.41836 1.10296 1.10357 1.49226 1.23690 0.99962 0.95114 1.00347 1.21150 0.92656 0.99445 1.01923 1.21513 1.00637 0.92352 0.94958 1.21218 0.94337 0.98417 1.01609 1.21490 0.94062 0.97770 0.94388 0.91682 0.91705 0.87763 0.90304 0.88595 0.76942 0.91153 0.91758 0.89836 0.84013 0.90573 0.76480 1.17622 1.17165 0.74456 0.88407 0.90606 0.84463 0.85040 0.84925 0.84394 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.05 10.56 101.05 1.07 1.02 16 2 O -0.36 -0.42 9.84 -40.52 -0.40 -0.82 16 3 C 0.51 1.11 7.85 34.61 0.27 1.39 16 4 O -0.50 -1.59 13.05 -19.24 -0.25 -1.84 16 5 C -0.13 -0.18 5.87 -104.98 -0.62 -0.80 16 6 C 0.00 0.00 5.35 -104.21 -0.56 -0.56 16 7 C -0.08 -0.05 2.65 -90.96 -0.24 -0.29 16 8 H 0.12 0.23 5.79 -51.93 -0.30 -0.07 16 9 C -0.13 -0.03 7.32 -25.92 -0.19 -0.22 16 10 C 0.12 0.14 4.32 -67.12 -0.29 -0.15 16 11 H 0.11 0.23 7.46 -51.93 -0.39 -0.15 16 12 N -0.71 -1.16 5.26 -54.32 -0.29 -1.44 16 13 C 0.59 2.63 7.79 -12.85 -0.10 2.53 16 14 O -0.52 -3.76 14.40 5.19 0.07 -3.68 16 15 C -0.06 -0.23 7.06 -81.99 -0.58 -0.81 16 16 C -0.06 -0.30 6.21 -104.16 -0.65 -0.94 16 17 C -0.09 -0.35 9.83 36.01 0.35 0.00 16 18 C -0.21 -0.81 9.27 -39.98 -0.37 -1.18 16 19 C 0.07 0.19 6.51 -81.95 -0.53 -0.34 16 20 C -0.06 0.04 3.07 36.00 0.11 0.15 16 21 O -0.55 0.37 12.86 -35.23 -0.45 -0.08 16 22 Si 0.72 -1.13 30.54 -169.99 -5.19 -6.32 16 23 N -0.52 -1.08 5.99 -5.70 -0.03 -1.12 16 24 C -0.15 -0.05 7.15 -25.92 -0.19 -0.23 16 25 C -0.13 0.06 9.27 -39.64 -0.37 -0.31 16 26 C -0.08 0.09 10.04 -39.48 -0.40 -0.31 16 27 C -0.14 0.14 10.03 -39.64 -0.40 -0.26 16 28 C -0.06 0.00 9.62 -39.17 -0.38 -0.38 16 29 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.10 -0.37 8.14 -51.92 -0.42 -0.79 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.10 -0.04 8.09 -51.92 -0.42 -0.46 16 34 H 0.40 -0.01 7.83 -40.82 -0.32 -0.33 16 35 H 0.07 0.25 8.14 -51.93 -0.42 -0.17 16 36 H 0.06 0.15 8.14 -51.93 -0.42 -0.27 16 37 H 0.08 0.41 6.49 -51.93 -0.34 0.08 16 38 H 0.14 0.41 6.17 -52.49 -0.32 0.09 16 39 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 40 H 0.39 -2.24 8.74 45.56 0.40 -1.84 16 41 H -0.25 -0.26 7.11 56.52 0.40 0.15 16 42 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 43 H 0.42 -0.14 8.19 -40.82 -0.33 -0.47 16 44 H 0.10 -0.10 5.68 -51.93 -0.29 -0.39 16 45 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 46 H 0.14 -0.27 5.70 -52.49 -0.30 -0.57 16 47 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 48 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 49 H 0.14 -0.16 7.63 -52.49 -0.40 -0.56 16 LS Contribution 404.76 15.07 6.10 6.10 Total: 0.00 -9.81 404.76 -10.92 -20.73 By element: Atomic # 1 Polarization: -3.39 SS G_CDS: -6.44 Total: -9.82 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -4.04 Total: -1.70 kcal Atomic # 7 Polarization: -2.24 SS G_CDS: -0.32 Total: -2.56 kcal Atomic # 8 Polarization: -5.40 SS G_CDS: -1.03 Total: -6.42 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.19 Total: -6.32 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -9.81 -10.92 -20.73 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15105874_13940406.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.555 kcal (2) G-P(sol) polarization free energy of solvation -9.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.732 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.287 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds