Wall clock time and date at job start Sun Mar 7 2021 03:27:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34712 * 116.99949 * 2 1 4 4 O 1.21476 * 120.00104 * 359.97438 * 3 2 1 5 5 C 1.47727 * 120.00076 * 179.97438 * 3 2 1 6 6 C 1.39609 * 120.14663 * 186.43155 * 5 3 2 7 7 C 1.50707 * 120.07900 * 0.02562 * 6 5 3 8 8 H 1.09002 * 112.90445 * 18.99858 * 7 6 5 9 9 C 1.53779 * 113.61526 * 150.24432 * 7 6 5 10 10 C 1.53782 * 87.07823 * 139.98266 * 9 7 6 11 11 H 1.08998 * 113.68842 * 220.00842 * 10 9 7 12 12 N 1.46497 * 113.61259 * 89.11941 * 10 9 7 13 13 C 1.34776 * 120.00009 * 107.50232 * 12 10 9 14 14 O 1.21287 * 120.00125 * 0.02562 * 13 12 10 15 15 C 1.50697 * 120.00012 * 179.97438 * 13 12 10 16 16 O 1.42902 * 109.47247 * 180.02562 * 15 13 12 17 17 C 1.35903 * 117.00032 * 179.97438 * 16 15 13 18 18 C 1.38712 * 120.05555 * 179.97438 * 17 16 15 19 19 C 1.50701 * 120.02753 * 0.04796 * 18 17 16 20 20 O 1.42905 * 109.47018 * 284.99679 * 19 18 17 21 21 Si 1.86294 * 109.47037 * 164.99763 * 19 18 17 22 22 C 1.38165 * 119.94375 * 180.02562 * 18 17 16 23 23 C 1.38247 * 120.05323 * 359.97438 * 22 18 17 24 24 C 1.38279 * 120.11471 * 0.02562 * 23 22 18 25 25 C 1.38130 * 120.05604 * 0.02562 * 24 23 22 26 26 C 1.53778 * 113.61334 * 247.74444 * 7 6 5 27 27 C 1.37966 * 119.84796 * 179.72374 * 6 5 3 28 28 C 1.38350 * 120.14899 * 0.30119 * 27 6 5 29 29 C 1.38391 * 120.30009 * 359.97438 * 28 27 6 30 30 C 1.37925 * 120.15420 * 359.96274 * 29 28 27 31 31 H 1.09004 * 109.47104 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47845 * 300.00015 * 1 2 3 33 33 H 1.08999 * 109.47569 * 60.00598 * 1 2 3 34 34 H 1.08999 * 113.61474 * 25.43310 * 9 7 6 35 35 H 1.09002 * 113.61469 * 254.53206 * 9 7 6 36 36 H 0.97003 * 119.99996 * 287.49691 * 12 10 9 37 37 H 1.09001 * 109.47325 * 59.99742 * 15 13 12 38 38 H 1.09007 * 109.47047 * 300.00006 * 15 13 12 39 39 H 1.09003 * 109.47132 * 44.99450 * 19 18 17 40 40 H 0.96694 * 113.99699 * 300.00146 * 20 19 18 41 41 H 1.48497 * 110.00383 * 58.68221 * 21 19 18 42 42 H 1.48502 * 109.99946 * 180.02562 * 21 19 18 43 43 H 1.08001 * 119.97292 * 179.97438 * 22 18 17 44 44 H 1.07999 * 119.93894 * 180.27719 * 23 22 18 45 45 H 1.07999 * 119.97626 * 180.02562 * 24 23 22 46 46 H 1.08003 * 120.02618 * 179.97438 * 25 24 23 47 47 H 1.09004 * 113.61094 * 105.47092 * 26 7 6 48 48 H 1.08995 * 113.69013 * 334.57502 * 26 7 6 49 49 H 1.07995 * 119.92890 * 180.27749 * 27 6 5 50 50 H 1.07990 * 119.84894 * 179.97438 * 28 27 6 51 51 H 1.08000 * 119.92533 * 179.97438 * 29 28 27 52 52 H 1.07995 * 120.07675 * 180.02562 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0635 1.2003 0.0000 4 8 1.4019 2.2191 -0.0005 5 6 3.5388 1.2776 0.0006 6 6 4.1761 2.5124 0.1358 7 6 3.3606 3.7713 0.2823 8 1 2.3346 3.5781 0.5956 9 6 4.0600 4.8661 1.1052 10 6 3.5030 5.8762 0.0882 11 1 4.2068 6.6657 -0.1753 12 7 2.1764 6.3900 0.4378 13 6 2.0386 7.6567 0.8770 14 8 3.0128 8.3715 0.9823 15 6 0.6738 8.1854 1.2361 16 8 0.7877 9.5420 1.6706 17 6 -0.3604 10.1721 2.0336 18 6 -0.3231 11.4896 2.4660 19 6 0.9909 12.2244 2.5327 20 8 1.7364 11.7657 3.6624 21 14 0.6724 14.0523 2.6996 22 6 -1.4917 12.1277 2.8349 23 6 -2.6975 11.4544 2.7729 24 6 -2.7374 10.1410 2.3423 25 6 -1.5718 9.4982 1.9733 26 6 3.4684 4.7189 -0.9239 27 6 5.5542 2.5769 0.1413 28 6 6.3044 1.4222 0.0069 29 6 5.6790 0.1956 -0.1333 30 6 4.3020 0.1166 -0.1391 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3635 0.5138 0.8899 33 1 -0.3634 0.5137 -0.8900 34 1 5.1474 4.7916 1.0959 35 1 3.6515 4.9862 2.1086 36 1 1.3971 5.8185 0.3532 37 1 0.2494 7.5811 2.0379 38 1 0.0241 8.1375 0.3622 39 1 1.5592 12.0362 1.6217 40 1 1.2901 11.9014 4.5094 41 1 -0.1288 14.3189 3.9211 42 1 1.9605 14.7883 2.7658 43 1 -1.4631 13.1534 3.1720 44 1 -3.6104 11.9564 3.0575 45 1 -3.6807 9.6173 2.2943 46 1 -1.6035 8.4722 1.6374 47 1 2.5822 4.7203 -1.5586 48 1 4.3935 4.6052 -1.4889 49 1 6.0486 3.5308 0.2503 50 1 7.3828 1.4783 0.0114 51 1 6.2705 -0.7019 -0.2382 52 1 3.8153 -0.8413 -0.2482 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15105874_2989392.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:27:45 Heat of formation + Delta-G solvation = -81.282302 kcal Electronic energy + Delta-G solvation = -36544.905290 eV Core-core repulsion = 31636.473297 eV Total energy + Delta-G solvation = -4908.431993 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.165 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -42.14295 -41.62691 -41.03555 -40.13764 -38.98986 -38.35657 -37.61803 -37.54247 -34.74460 -32.78494 -32.61212 -31.98185 -31.19235 -29.41367 -28.70737 -26.78879 -26.70680 -26.26527 -24.83632 -23.84270 -22.93603 -22.63197 -21.99955 -21.76276 -20.27789 -19.54428 -19.05143 -18.41103 -18.20557 -18.03047 -17.54859 -17.45954 -17.27449 -16.92065 -16.86998 -16.53891 -16.24859 -15.95805 -15.68319 -15.59721 -15.58439 -15.15731 -15.12182 -15.04145 -14.76574 -14.56469 -14.20553 -14.13968 -13.93358 -13.75258 -13.55121 -13.47803 -13.18682 -13.13963 -13.06231 -12.91167 -12.57639 -12.51570 -12.35384 -12.15508 -11.89203 -11.84806 -11.77577 -11.69055 -11.43497 -11.08476 -10.76780 -10.54344 -10.22286 -10.06809 -9.98695 -9.75372 -9.22972 -4.95872 -0.36106 0.22603 0.31358 0.41000 1.28124 1.35718 1.42900 1.44924 1.53720 1.66484 1.92777 2.54973 2.69155 2.69951 3.38687 3.43865 3.45626 3.56410 3.63575 3.67697 3.71087 3.85880 3.86786 3.94019 3.94460 4.01762 4.11643 4.12403 4.16545 4.27117 4.30644 4.31360 4.36714 4.36762 4.42042 4.52751 4.58960 4.66441 4.67402 4.69544 4.77711 4.80369 4.89618 4.94579 4.97396 5.00517 5.06736 5.27721 5.28013 5.29459 5.36780 5.40667 5.45973 5.52220 5.69892 5.75280 5.86332 6.24170 6.40352 6.52082 6.63347 7.04086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.361 6.361 3 C 0.507 3.493 4 O -0.518 6.518 5 C -0.151 4.151 6 C -0.015 4.015 7 C -0.097 4.097 8 H 0.131 0.869 9 C -0.144 4.144 10 C 0.119 3.881 11 H 0.090 0.910 12 N -0.694 5.694 13 C 0.516 3.484 14 O -0.567 6.567 15 C 0.038 3.962 16 O -0.311 6.311 17 C 0.128 3.872 18 C -0.163 4.163 19 C -0.084 4.084 20 O -0.549 6.549 21 Si 0.784 3.216 22 C -0.088 4.088 23 C -0.153 4.153 24 C -0.074 4.074 25 C -0.213 4.213 26 C -0.116 4.116 27 C -0.139 4.139 28 C -0.077 4.077 29 C -0.140 4.140 30 C -0.065 4.065 31 H 0.128 0.872 32 H 0.064 0.936 33 H 0.065 0.935 34 H 0.105 0.895 35 H 0.063 0.937 36 H 0.417 0.583 37 H 0.117 0.883 38 H 0.124 0.876 39 H 0.096 0.904 40 H 0.381 0.619 41 H -0.264 1.264 42 H -0.307 1.307 43 H 0.148 0.852 44 H 0.151 0.849 45 H 0.153 0.847 46 H 0.151 0.849 47 H 0.079 0.921 48 H 0.104 0.896 49 H 0.147 0.853 50 H 0.154 0.846 51 H 0.154 0.846 52 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.529 -6.350 -2.452 8.770 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.277 6.277 3 C 0.354 3.646 4 O -0.409 6.409 5 C -0.152 4.152 6 C -0.015 4.015 7 C -0.115 4.115 8 H 0.148 0.852 9 C -0.183 4.183 10 C 0.014 3.986 11 H 0.108 0.892 12 N -0.348 5.348 13 C 0.302 3.698 14 O -0.444 6.444 15 C -0.040 4.040 16 O -0.224 6.224 17 C 0.082 3.918 18 C -0.164 4.164 19 C -0.192 4.192 20 O -0.357 6.357 21 Si 0.688 3.312 22 C -0.105 4.105 23 C -0.171 4.171 24 C -0.092 4.092 25 C -0.232 4.232 26 C -0.154 4.154 27 C -0.157 4.157 28 C -0.094 4.094 29 C -0.158 4.158 30 C -0.083 4.083 31 H 0.146 0.854 32 H 0.083 0.917 33 H 0.084 0.916 34 H 0.123 0.877 35 H 0.082 0.918 36 H 0.255 0.745 37 H 0.135 0.865 38 H 0.142 0.858 39 H 0.114 0.886 40 H 0.230 0.770 41 H -0.190 1.190 42 H -0.236 1.236 43 H 0.165 0.835 44 H 0.169 0.831 45 H 0.171 0.829 46 H 0.169 0.831 47 H 0.097 0.903 48 H 0.123 0.877 49 H 0.165 0.835 50 H 0.171 0.829 51 H 0.171 0.829 52 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -4.349 -4.970 -2.369 7.016 hybrid contribution -0.231 -1.147 1.001 1.540 sum -4.580 -6.117 -1.368 7.763 Atomic orbital electron populations 1.23555 0.74270 1.05720 1.02745 1.86546 1.25217 1.32158 1.83814 1.21502 0.89570 0.81471 0.72008 1.90606 1.67370 1.35600 1.47354 1.19080 0.88766 0.95502 1.11891 1.19926 0.94352 0.92973 0.94295 1.22357 1.01430 0.89907 0.97800 0.85156 1.23625 1.01724 0.94689 0.98214 1.21814 0.84631 0.95457 0.96737 0.89220 1.45403 1.10566 1.12271 1.66517 1.20515 0.90653 0.82018 0.76594 1.90768 1.41923 1.58353 1.53387 1.22658 0.95118 0.82720 1.03487 1.86186 1.30277 1.25905 1.80032 1.19091 0.85178 0.92162 0.95331 1.19717 0.96536 0.93162 1.07019 1.25248 0.91757 1.10843 0.91330 1.86652 1.47488 1.84235 1.17298 0.94023 0.79304 0.71256 0.86619 1.21200 0.91380 1.00416 0.97509 1.21406 0.98357 0.95336 1.02007 1.21392 0.98370 0.94752 0.94721 1.21585 0.91726 1.02116 1.07746 1.23246 1.04037 0.92426 0.95696 1.21288 0.92314 1.00316 1.01752 1.21828 1.01807 0.92004 0.93811 1.21513 0.94095 0.99381 1.00797 1.21663 0.94647 0.97714 0.94261 0.85408 0.91710 0.91620 0.87685 0.91774 0.74512 0.86500 0.85829 0.88625 0.77033 1.18968 1.23582 0.83509 0.83082 0.82899 0.83093 0.90281 0.87733 0.83520 0.82880 0.82870 0.83621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.10 10.56 113.37 1.20 1.10 16 2 O -0.36 -0.79 9.84 -56.22 -0.55 -1.34 16 3 C 0.51 2.26 7.85 70.33 0.55 2.82 16 4 O -0.52 -3.33 12.90 19.92 0.26 -3.07 16 5 C -0.15 -0.42 5.87 -20.10 -0.12 -0.53 16 6 C -0.02 -0.02 5.31 -19.60 -0.10 -0.13 16 7 C -0.10 -0.10 3.14 -11.01 -0.03 -0.13 16 8 H 0.13 0.47 4.89 -13.55 -0.07 0.40 16 9 C -0.14 -0.16 7.23 31.12 0.23 0.06 16 10 C 0.12 0.27 4.32 45.52 0.20 0.46 16 11 H 0.09 0.55 7.46 -2.39 -0.02 0.53 16 12 N -0.69 -0.86 5.26 -440.04 -2.32 -3.17 16 13 C 0.52 3.77 7.91 87.66 0.69 4.46 16 14 O -0.57 -10.49 16.10 15.98 0.26 -10.23 16 15 C 0.04 0.06 5.22 71.24 0.37 0.43 16 16 O -0.31 -3.12 9.00 -73.42 -0.66 -3.78 16 17 C 0.13 0.80 6.66 22.51 0.15 0.95 16 18 C -0.16 -0.91 5.27 -19.77 -0.10 -1.01 16 19 C -0.08 -0.65 2.38 71.24 0.17 -0.49 16 20 O -0.55 -6.45 12.88 -148.98 -1.92 -8.37 16 21 Si 0.78 1.71 30.25 68.60 2.07 3.78 16 22 C -0.09 -0.06 8.66 22.25 0.19 0.13 16 23 C -0.15 0.28 10.04 22.28 0.22 0.51 16 24 C -0.07 0.17 10.04 22.25 0.22 0.39 16 25 C -0.21 -0.03 9.04 22.37 0.20 0.17 16 26 C -0.12 0.07 7.32 31.12 0.23 0.29 16 27 C -0.14 0.23 9.02 22.23 0.20 0.43 16 28 C -0.08 0.28 10.04 22.33 0.22 0.51 16 29 C -0.14 0.47 10.03 22.23 0.22 0.69 16 30 C -0.06 0.03 9.62 22.54 0.22 0.25 16 31 H 0.13 -1.07 8.14 -2.39 -0.02 -1.09 16 32 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 33 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 34 H 0.10 -0.12 5.96 -2.39 -0.01 -0.14 16 35 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 36 H 0.42 -1.71 8.70 -92.71 -0.81 -2.52 16 37 H 0.12 -0.44 7.66 -2.39 -0.02 -0.46 16 38 H 0.12 -0.62 7.66 -2.38 -0.02 -0.64 16 39 H 0.10 1.06 7.83 -2.39 -0.02 1.05 16 40 H 0.38 1.59 8.70 -74.06 -0.64 0.94 16 41 H -0.26 -0.69 6.68 99.48 0.66 -0.02 16 42 H -0.31 -3.18 7.11 99.48 0.71 -2.47 16 43 H 0.15 -0.39 4.86 -2.91 -0.01 -0.41 16 44 H 0.15 -1.01 8.06 -2.91 -0.02 -1.04 16 45 H 0.15 -1.16 8.06 -2.91 -0.02 -1.18 16 46 H 0.15 -0.82 6.30 -2.91 -0.02 -0.83 16 47 H 0.08 -0.04 8.14 -2.38 -0.02 -0.06 16 48 H 0.10 -0.23 7.99 -2.39 -0.02 -0.25 16 49 H 0.15 -0.69 6.20 -2.91 -0.02 -0.71 16 50 H 0.15 -1.30 8.06 -2.92 -0.02 -1.32 16 51 H 0.15 -1.22 8.06 -2.91 -0.02 -1.24 16 52 H 0.15 -0.43 7.63 -2.91 -0.02 -0.45 16 Total: 0.00 -28.71 430.33 1.75 -26.95 By element: Atomic # 1 Polarization: -11.64 SS G_CDS: -0.52 Total: -12.15 kcal Atomic # 6 Polarization: 6.25 SS G_CDS: 5.13 Total: 11.38 kcal Atomic # 7 Polarization: -0.86 SS G_CDS: -2.32 Total: -3.17 kcal Atomic # 8 Polarization: -24.17 SS G_CDS: -2.62 Total: -26.79 kcal Atomic # 14 Polarization: 1.71 SS G_CDS: 2.07 Total: 3.78 kcal Total: -28.71 1.75 -26.95 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15105874_2989392.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.328 kcal (2) G-P(sol) polarization free energy of solvation -28.709 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.037 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.755 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.954 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.282 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds