Wall clock time and date at job start Sun Mar 7 2021 03:28:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34713 * 116.99696 * 2 1 4 4 O 1.21467 * 120.00253 * 359.97438 * 3 2 1 5 5 C 1.47733 * 119.99708 * 179.97438 * 3 2 1 6 6 C 1.39600 * 120.15084 * 173.39554 * 5 3 2 7 7 C 1.50706 * 120.07669 * 359.97438 * 6 5 3 8 8 H 1.08999 * 112.84617 * 327.11691 * 7 6 5 9 9 C 1.53786 * 113.61140 * 98.30469 * 7 6 5 10 10 C 1.53785 * 87.07755 * 140.06675 * 9 7 6 11 11 H 1.08995 * 113.61233 * 219.93081 * 10 9 7 12 12 N 1.46504 * 113.61260 * 89.11878 * 10 9 7 13 13 C 1.34772 * 120.00140 * 154.99900 * 12 10 9 14 14 O 1.21284 * 120.00062 * 359.97438 * 13 12 10 15 15 C 1.50706 * 120.00057 * 179.97438 * 13 12 10 16 16 F 1.39902 * 109.46735 * 60.00480 * 15 13 12 17 17 F 1.39895 * 109.47050 * 300.00005 * 15 13 12 18 18 O 1.42899 * 109.46623 * 179.97438 * 15 13 12 19 19 C 1.35910 * 116.99364 * 180.02562 * 18 15 13 20 20 C 1.38737 * 120.05013 * 180.02562 * 19 18 15 21 21 C 1.38147 * 119.93829 * 179.97438 * 20 19 18 22 22 C 1.38259 * 120.05456 * 359.97438 * 21 20 19 23 23 C 1.50712 * 119.94158 * 179.72717 * 22 21 20 24 24 O 1.42905 * 109.46563 * 299.99984 * 23 22 21 25 25 Si 1.86301 * 109.46927 * 180.02562 * 23 22 21 26 26 C 1.38265 * 120.11683 * 359.97438 * 22 21 20 27 27 C 1.38143 * 120.05364 * 0.02562 * 26 22 21 28 28 C 1.53777 * 113.69131 * 195.84127 * 7 6 5 29 29 C 1.37968 * 119.85082 * 179.70651 * 6 5 3 30 30 C 1.38350 * 120.14435 * 0.25094 * 29 6 5 31 31 C 1.38386 * 120.30595 * 0.02627 * 30 29 6 32 32 C 1.37926 * 120.14851 * 359.97438 * 31 30 29 33 33 H 1.09004 * 109.46581 * 60.00572 * 1 2 3 34 34 H 1.09001 * 109.47412 * 180.02562 * 1 2 3 35 35 H 1.08995 * 109.47463 * 300.01125 * 1 2 3 36 36 H 1.08998 * 113.61437 * 25.52504 * 9 7 6 37 37 H 1.09000 * 113.61319 * 254.61391 * 9 7 6 38 38 H 0.97002 * 119.99669 * 334.99599 * 12 10 9 39 39 H 1.08000 * 120.03214 * 0.02562 * 20 19 18 40 40 H 1.08001 * 119.97166 * 180.02562 * 21 20 19 41 41 H 1.08995 * 109.47065 * 60.00239 * 23 22 21 42 42 H 0.96695 * 113.99553 * 180.02562 * 24 23 22 43 43 H 1.48490 * 110.00302 * 298.67701 * 25 23 22 44 44 H 1.48502 * 110.00139 * 60.00235 * 25 23 22 45 45 H 1.08006 * 119.97135 * 179.97438 * 26 22 21 46 46 H 1.08004 * 120.02679 * 180.02562 * 27 26 22 47 47 H 1.09004 * 113.61020 * 105.46396 * 28 7 6 48 48 H 1.08994 * 113.61771 * 334.55804 * 28 7 6 49 49 H 1.07998 * 119.92528 * 180.28072 * 29 6 5 50 50 H 1.08003 * 119.83953 * 180.02562 * 30 29 6 51 51 H 1.08000 * 119.92310 * 179.97438 * 31 30 29 52 52 H 1.08005 * 120.07009 * 180.02562 * 32 31 30 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0635 1.2003 0.0000 4 8 1.4020 2.2190 -0.0005 5 6 3.5388 1.2777 0.0006 6 6 4.1763 2.5118 -0.1383 7 6 3.3611 3.7702 -0.2899 8 1 2.4264 3.6069 -0.8264 9 6 3.1895 4.5548 1.0216 10 6 3.3818 5.8338 0.1897 11 1 3.9882 6.5909 0.6869 12 7 2.1332 6.3726 -0.3552 13 6 2.0379 7.6838 -0.6520 14 8 2.9856 8.4178 -0.4675 15 6 0.7536 8.2380 -1.2131 16 9 -0.2852 8.0215 -0.3014 17 9 0.4566 7.5958 -2.4199 18 8 0.9005 9.6407 -1.4428 19 6 -0.1749 10.2985 -1.9509 20 6 -0.1019 11.6616 -2.1991 21 6 -1.1961 12.3278 -2.7160 22 6 -2.3630 11.6372 -2.9865 23 6 -3.5572 12.3677 -3.5446 24 8 -3.9627 13.3871 -2.6289 25 14 -4.9586 11.1660 -3.7957 26 6 -2.4379 10.2786 -2.7410 27 6 -1.3465 9.6078 -2.2241 28 6 4.1688 4.9707 -0.8106 29 6 5.5544 2.5776 -0.1308 30 6 6.3043 1.4233 0.0086 31 6 5.6789 0.1959 0.1409 32 6 4.3020 0.1159 0.1351 33 1 -0.3632 0.5138 -0.8901 34 1 -0.3634 -1.0277 0.0005 35 1 -0.3634 0.5140 0.8898 36 1 3.9875 4.3791 1.7430 37 1 2.1950 4.4633 1.4582 38 1 1.3751 5.7857 -0.5024 39 1 0.8098 12.2011 -1.9891 40 1 -1.1398 13.3888 -2.9098 41 1 -3.2919 12.8215 -4.4994 42 1 -4.7284 13.8987 -2.9238 43 1 -4.5609 10.1184 -4.7700 44 1 -5.3297 10.5408 -2.5008 45 1 -3.3507 9.7415 -2.9527 46 1 -1.4053 8.5464 -2.0329 47 1 3.9647 5.2150 -1.8531 48 1 5.2344 4.9088 -0.5901 49 1 6.0488 3.5322 -0.2336 50 1 7.3828 1.4805 0.0142 51 1 6.2703 -0.7012 0.2490 52 1 3.8152 -0.8426 0.2389 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15105874_4549640.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:28:39 Heat of formation + Delta-G solvation = -175.560734 kcal Electronic energy + Delta-G solvation = -42361.377248 eV Core-core repulsion = 36509.949084 eV Total energy + Delta-G solvation = -5851.428164 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.147 amu Computer time = 2.02 seconds Orbital eigenvalues (eV) -51.05178 -49.02882 -42.19702 -41.58160 -41.35333 -40.33696 -39.38035 -38.86859 -37.54716 -37.31980 -35.10503 -32.67966 -32.61901 -32.26982 -31.94049 -29.28864 -28.73666 -26.89691 -26.67701 -26.06568 -24.85319 -24.69469 -23.33046 -22.73450 -22.46894 -21.91197 -20.81489 -20.54354 -19.84960 -19.80262 -19.07610 -18.42400 -18.31440 -18.09648 -17.60051 -17.47165 -17.17522 -16.93468 -16.70852 -16.53274 -16.49616 -16.08533 -15.96536 -15.86394 -15.66274 -15.55279 -15.42237 -15.29941 -15.27183 -15.13737 -14.91136 -14.57802 -14.55371 -14.45990 -14.27738 -14.02285 -13.87081 -13.74935 -13.57809 -13.31431 -13.27890 -13.15428 -12.96574 -12.60950 -12.50411 -12.34273 -12.28691 -11.99776 -11.90599 -11.85434 -11.72762 -11.49121 -10.98838 -10.58347 -10.39306 -10.34760 -10.07022 -9.77724 -9.69667 -4.99036 -0.36036 -0.14426 -0.03620 0.30049 0.32742 0.49475 1.26599 1.45063 1.53581 1.60125 1.65280 1.85228 1.93658 2.28263 2.61249 2.69875 3.06185 3.24461 3.27096 3.38241 3.47623 3.49143 3.54013 3.64678 3.76331 3.79761 3.90442 3.91626 4.07273 4.08785 4.13556 4.22523 4.23323 4.26467 4.34272 4.37996 4.42144 4.43843 4.63110 4.65243 4.66219 4.68177 4.74377 4.77118 4.79031 4.85560 4.91136 4.91764 5.02663 5.17754 5.19799 5.23279 5.25500 5.29709 5.46310 5.57452 5.66015 5.72427 5.85970 6.30054 6.61266 6.90593 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.362 6.362 3 C 0.503 3.497 4 O -0.520 6.520 5 C -0.150 4.150 6 C -0.016 4.016 7 C -0.083 4.083 8 H 0.109 0.891 9 C -0.116 4.116 10 C 0.113 3.887 11 H 0.112 0.888 12 N -0.672 5.672 13 C 0.523 3.477 14 O -0.499 6.499 15 C 0.432 3.568 16 F -0.174 7.174 17 F -0.173 7.173 18 O -0.298 6.298 19 C 0.085 3.915 20 C -0.128 4.128 21 C -0.052 4.052 22 C -0.109 4.109 23 C -0.072 4.072 24 O -0.562 6.562 25 Si 0.770 3.230 26 C -0.101 4.101 27 C -0.195 4.195 28 C -0.142 4.142 29 C -0.137 4.137 30 C -0.076 4.076 31 C -0.140 4.140 32 C -0.066 4.066 33 H 0.062 0.938 34 H 0.128 0.872 35 H 0.063 0.937 36 H 0.114 0.886 37 H 0.074 0.926 38 H 0.419 0.581 39 H 0.157 0.843 40 H 0.165 0.835 41 H 0.104 0.896 42 H 0.405 0.595 43 H -0.289 1.289 44 H -0.300 1.300 45 H 0.126 0.874 46 H 0.135 0.865 47 H 0.072 0.928 48 H 0.122 0.878 49 H 0.155 0.845 50 H 0.156 0.844 51 H 0.153 0.847 52 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.062 -3.280 -1.940 3.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.278 6.278 3 C 0.350 3.650 4 O -0.411 6.411 5 C -0.151 4.151 6 C -0.017 4.017 7 C -0.101 4.101 8 H 0.127 0.873 9 C -0.153 4.153 10 C 0.010 3.990 11 H 0.130 0.870 12 N -0.324 5.324 13 C 0.301 3.699 14 O -0.373 6.373 15 C 0.354 3.646 16 F -0.156 7.156 17 F -0.155 7.155 18 O -0.215 6.215 19 C 0.042 3.958 20 C -0.146 4.146 21 C -0.070 4.070 22 C -0.109 4.109 23 C -0.182 4.182 24 O -0.372 6.372 25 Si 0.677 3.323 26 C -0.118 4.118 27 C -0.213 4.213 28 C -0.180 4.180 29 C -0.154 4.154 30 C -0.093 4.093 31 C -0.157 4.157 32 C -0.084 4.084 33 H 0.081 0.919 34 H 0.146 0.854 35 H 0.082 0.918 36 H 0.132 0.868 37 H 0.093 0.907 38 H 0.256 0.744 39 H 0.175 0.825 40 H 0.182 0.818 41 H 0.122 0.878 42 H 0.257 0.743 43 H -0.216 1.216 44 H -0.228 1.228 45 H 0.143 0.857 46 H 0.153 0.847 47 H 0.091 0.909 48 H 0.140 0.860 49 H 0.172 0.828 50 H 0.173 0.827 51 H 0.171 0.829 52 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 0.764 -3.480 -1.360 3.814 hybrid contribution -0.698 -0.800 -0.007 1.061 sum 0.067 -4.280 -1.367 4.493 Atomic orbital electron populations 1.23526 0.74464 1.05651 1.02556 1.86541 1.25026 1.32322 1.83942 1.21558 0.89728 0.81457 0.72265 1.90731 1.67467 1.35988 1.46957 1.19078 0.88544 0.95614 1.11894 1.19854 0.94462 0.92661 0.94679 1.21933 0.99073 0.90405 0.98717 0.87313 1.23260 1.04030 0.91822 0.96220 1.22157 0.84296 0.96100 0.96463 0.86998 1.45517 1.17867 1.06446 1.62580 1.19252 0.86319 0.84198 0.80176 1.90844 1.37072 1.58227 1.51109 1.21877 0.85577 0.80791 0.76363 1.93192 1.60982 1.94378 1.67040 1.93188 1.93959 1.81746 1.46568 1.86645 1.37395 1.18497 1.78990 1.19209 0.85695 0.93264 0.97606 1.20842 1.01617 0.90110 1.02056 1.21167 0.90079 1.01216 0.94502 1.19811 0.96459 0.92987 1.01629 1.24707 1.00316 0.97966 0.95234 1.86436 1.54233 1.49792 1.46782 0.94465 0.82392 0.77981 0.77440 1.20815 0.97651 0.94730 0.98630 1.21488 0.93496 1.01105 1.05238 1.23705 1.01050 0.93726 0.99535 1.21374 0.92010 1.00568 1.01478 1.21852 1.01905 0.91923 0.93653 1.21519 0.93973 0.99530 1.00713 1.21649 0.94732 0.97631 0.94401 0.91926 0.85358 0.91844 0.86779 0.90720 0.74362 0.82548 0.81782 0.87831 0.74299 1.21606 1.22832 0.85672 0.84706 0.90920 0.85973 0.82759 0.82656 0.82941 0.83871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.36 -1.20 9.84 -56.23 -0.55 -1.75 16 3 C 0.50 2.66 7.84 70.33 0.55 3.21 16 4 O -0.52 -4.05 13.06 19.94 0.26 -3.79 16 5 C -0.15 -0.38 5.87 -20.10 -0.12 -0.50 16 6 C -0.02 -0.01 5.34 -19.60 -0.10 -0.11 16 7 C -0.08 -0.01 2.65 -11.01 -0.03 -0.04 16 8 H 0.11 0.42 5.79 -2.39 -0.01 0.40 16 9 C -0.12 0.14 7.32 31.12 0.23 0.37 16 10 C 0.11 0.01 4.32 45.52 0.20 0.20 16 11 H 0.11 0.12 7.46 -2.39 -0.02 0.10 16 12 N -0.67 -1.69 5.26 -440.02 -2.32 -4.01 16 13 C 0.52 4.29 7.34 87.66 0.64 4.94 16 14 O -0.50 -6.93 16.10 16.00 0.26 -6.67 16 15 C 0.43 3.88 2.05 71.24 0.15 4.02 16 16 F -0.17 -1.46 15.29 44.97 0.69 -0.78 16 17 F -0.17 -1.36 15.29 44.97 0.69 -0.67 16 18 O -0.30 -3.66 9.60 -73.50 -0.71 -4.37 16 19 C 0.09 0.92 6.48 22.51 0.15 1.07 16 20 C -0.13 -0.90 9.99 22.37 0.22 -0.68 16 21 C -0.05 -0.24 9.60 22.25 0.21 -0.03 16 22 C -0.11 -0.65 5.42 -19.85 -0.11 -0.76 16 23 C -0.07 0.04 2.81 71.24 0.20 0.24 16 24 O -0.56 0.42 12.74 -148.98 -1.90 -1.48 16 25 Si 0.77 -0.91 29.78 68.60 2.04 1.14 16 26 C -0.10 -0.87 8.66 22.25 0.19 -0.68 16 27 C -0.19 -1.99 8.26 22.36 0.18 -1.80 16 28 C -0.14 0.29 7.15 31.12 0.22 0.51 16 29 C -0.14 0.49 9.27 22.23 0.21 0.70 16 30 C -0.08 0.39 10.04 22.33 0.22 0.61 16 31 C -0.14 0.57 10.03 22.23 0.22 0.79 16 32 C -0.07 0.05 9.62 22.54 0.22 0.26 16 33 H 0.06 -0.07 8.14 -2.38 -0.02 -0.09 16 34 H 0.13 -0.88 8.14 -2.39 -0.02 -0.90 16 35 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 36 H 0.11 -0.42 8.09 -2.39 -0.02 -0.44 16 37 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 38 H 0.42 0.00 8.70 -92.71 -0.81 -0.80 16 39 H 0.16 0.54 8.06 -2.91 -0.02 0.52 16 40 H 0.16 -0.05 8.06 -2.91 -0.02 -0.08 16 41 H 0.10 -0.58 7.96 -2.39 -0.02 -0.59 16 42 H 0.41 -4.63 8.74 -74.06 -0.65 -5.28 16 43 H -0.29 -1.25 7.11 99.48 0.71 -0.54 16 44 H -0.30 -2.12 7.11 99.48 0.71 -1.41 16 45 H 0.13 0.92 4.87 -2.91 -0.01 0.90 16 46 H 0.14 1.22 5.10 -2.91 -0.01 1.21 16 47 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 48 H 0.12 -0.74 5.68 -2.39 -0.01 -0.76 16 49 H 0.16 -1.20 5.72 -2.91 -0.02 -1.22 16 50 H 0.16 -1.57 8.06 -2.91 -0.02 -1.59 16 51 H 0.15 -1.29 8.06 -2.91 -0.02 -1.31 16 52 H 0.14 -0.38 7.63 -2.91 -0.02 -0.40 16 Total: 0.00 -24.22 440.53 2.94 -21.28 By element: Atomic # 1 Polarization: -11.99 SS G_CDS: -0.38 Total: -12.37 kcal Atomic # 6 Polarization: 8.61 SS G_CDS: 4.86 Total: 13.47 kcal Atomic # 7 Polarization: -1.69 SS G_CDS: -2.32 Total: -4.01 kcal Atomic # 8 Polarization: -15.42 SS G_CDS: -2.64 Total: -18.06 kcal Atomic # 9 Polarization: -2.82 SS G_CDS: 1.38 Total: -1.45 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: 2.04 Total: 1.14 kcal Total: -24.22 2.94 -21.28 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15105874_4549640.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.281 kcal (2) G-P(sol) polarization free energy of solvation -24.218 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.280 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.02 seconds