Wall clock time and date at job start Sun Mar 7 2021 03:29:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34710 * 116.99897 * 2 1 4 4 O 1.21470 * 120.00412 * 359.97438 * 3 2 1 5 5 C 1.47730 * 119.99981 * 179.97438 * 3 2 1 6 6 C 1.39609 * 120.14608 * 173.39627 * 5 3 2 7 7 C 1.50702 * 120.08028 * 359.97438 * 6 5 3 8 8 H 1.08998 * 112.84612 * 327.09521 * 7 6 5 9 9 C 1.53779 * 113.61288 * 98.29063 * 7 6 5 10 10 C 1.53777 * 87.08006 * 140.06608 * 9 7 6 11 11 H 1.09005 * 113.61413 * 219.92977 * 10 9 7 12 12 N 1.46499 * 113.61311 * 89.11673 * 10 9 7 13 13 C 1.34775 * 119.99829 * 156.52737 * 12 10 9 14 14 O 1.21637 * 120.00338 * 359.97438 * 13 12 10 15 15 C 1.47191 * 120.00153 * 179.97438 * 13 12 10 16 16 C 1.36011 * 123.45743 * 0.02562 * 15 13 12 17 17 S 1.70450 * 110.81621 * 179.97438 * 16 15 13 18 18 C 1.75501 * 92.44450 * 0.02562 * 17 16 15 19 19 C 1.50709 * 124.71169 * 179.97438 * 18 17 16 20 20 O 1.42895 * 109.47084 * 244.97152 * 19 18 17 21 21 Si 1.86302 * 109.46907 * 4.97647 * 19 18 17 22 22 C 1.32771 * 110.57679 * 359.73582 * 18 17 16 23 23 C 1.53777 * 87.17364 * 334.52451 * 10 9 7 24 24 C 1.37970 * 119.84604 * 179.70826 * 6 5 3 25 25 C 1.38348 * 120.14562 * 0.24974 * 24 6 5 26 26 C 1.38388 * 120.30728 * 0.02759 * 25 24 6 27 27 C 1.37917 * 120.14909 * 359.97438 * 26 25 24 28 28 H 1.09004 * 109.47205 * 180.02562 * 1 2 3 29 29 H 1.09005 * 109.47746 * 300.00450 * 1 2 3 30 30 H 1.09000 * 109.47144 * 60.00865 * 1 2 3 31 31 H 1.08999 * 113.61282 * 25.51245 * 9 7 6 32 32 H 1.09006 * 113.61099 * 254.61509 * 9 7 6 33 33 H 0.96998 * 120.00413 * 336.52565 * 12 10 9 34 34 H 1.07997 * 124.59351 * 359.94570 * 16 15 13 35 35 H 1.09002 * 109.46909 * 124.97378 * 19 18 17 36 36 H 0.96704 * 113.99876 * 60.00648 * 20 19 18 37 37 H 1.48501 * 110.00110 * 58.68046 * 21 19 18 38 38 H 1.48508 * 109.99560 * 179.97438 * 21 19 18 39 39 H 1.07999 * 123.46076 * 180.24597 * 22 18 17 40 40 H 1.08998 * 113.61147 * 140.02875 * 23 10 9 41 41 H 1.09006 * 113.61202 * 270.92708 * 23 10 9 42 42 H 1.07998 * 119.92863 * 180.27501 * 24 6 5 43 43 H 1.08004 * 119.84608 * 180.02562 * 25 24 6 44 44 H 1.07997 * 119.92611 * 179.97438 * 26 25 24 45 45 H 1.07997 * 120.07640 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0635 1.2003 0.0000 4 8 1.4020 2.2191 -0.0005 5 6 3.5387 1.2776 0.0006 6 6 4.1762 2.5119 -0.1383 7 6 3.3609 3.7703 -0.2899 8 1 2.4264 3.6070 -0.8267 9 6 3.1890 4.5546 1.0217 10 6 3.3814 5.8337 0.1901 11 1 3.9876 6.5909 0.6875 12 7 2.1329 6.3726 -0.3551 13 6 2.0476 7.6776 -0.6805 14 8 3.0070 8.4082 -0.5212 15 6 0.7934 8.2190 -1.2288 16 6 -0.3209 7.4670 -1.4352 17 16 -1.5820 8.4167 -2.0780 18 6 -0.5934 9.8667 -2.0736 19 6 -1.0570 11.2229 -2.5397 20 8 -0.3086 11.6116 -3.6933 21 14 -2.8678 11.1457 -2.9709 22 6 0.6180 9.6042 -1.5978 23 6 4.1700 4.9731 -0.8111 24 6 5.5543 2.5777 -0.1308 25 6 6.3042 1.4235 0.0086 26 6 5.6788 0.1961 0.1409 27 6 4.3020 0.1159 0.1350 28 1 -0.3634 -1.0277 0.0005 29 1 -0.3635 0.5139 0.8899 30 1 -0.3633 0.5137 -0.8901 31 1 3.9868 4.3788 1.7433 32 1 2.1944 4.4629 1.4581 33 1 1.3677 5.7901 -0.4818 34 1 -0.3964 6.4111 -1.2213 35 1 -0.9036 11.9524 -1.7444 36 1 -0.3981 11.0065 -4.4423 37 1 -3.6536 10.7118 -1.7879 38 1 -3.3373 12.4773 -3.4314 39 1 1.3936 10.3493 -1.4996 40 1 3.9668 5.2192 -1.8533 41 1 5.2355 4.9116 -0.5895 42 1 6.0487 3.5323 -0.2337 43 1 7.3827 1.4806 0.0142 44 1 6.2703 -0.7011 0.2489 45 1 3.8152 -0.8426 0.2380 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15105874_6894386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:29:39 Heat of formation + Delta-G solvation = -52.130066 kcal Electronic energy + Delta-G solvation = -30749.566259 eV Core-core repulsion = 26405.770459 eV Total energy + Delta-G solvation = -4343.795800 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.107 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.05960 -41.15171 -40.21906 -39.10997 -38.45113 -37.43977 -37.01786 -34.55730 -32.66700 -32.19346 -31.31852 -28.81185 -26.97359 -26.80211 -26.73257 -25.33932 -24.80470 -23.02263 -22.08732 -21.87239 -20.49322 -20.23304 -19.06551 -18.86455 -18.20595 -17.97714 -17.59762 -17.39955 -17.19033 -16.69319 -16.30091 -16.19333 -15.91915 -15.71224 -15.56516 -15.27964 -15.20807 -14.91087 -14.56393 -14.41573 -14.13350 -14.11304 -13.81257 -13.65334 -13.63160 -13.48952 -13.20919 -13.08669 -12.98910 -12.65622 -12.46866 -12.28679 -12.24347 -11.90284 -11.81141 -11.72230 -11.39822 -10.91035 -10.83340 -10.58639 -10.12477 -10.07139 -9.97118 -9.81591 -9.47671 -5.21278 -0.36599 -0.33930 0.25078 0.35255 0.69798 0.94241 1.18569 1.50614 1.55999 1.65478 1.86521 2.12968 2.39912 2.65984 3.33727 3.40351 3.53250 3.59024 3.64578 3.70674 3.80055 3.87391 3.89107 3.99792 4.01407 4.09648 4.18629 4.19273 4.29293 4.30473 4.32920 4.40972 4.52244 4.65206 4.69027 4.73503 4.73867 4.86746 4.91632 4.96007 5.01946 5.05318 5.15038 5.19630 5.24063 5.27060 5.37460 5.49749 5.67479 5.76225 6.47317 6.52203 6.70673 7.27021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.355 6.355 3 C 0.509 3.491 4 O -0.501 6.501 5 C -0.130 4.130 6 C -0.004 4.004 7 C -0.083 4.083 8 H 0.125 0.875 9 C -0.126 4.126 10 C 0.124 3.876 11 H 0.106 0.894 12 N -0.707 5.707 13 C 0.581 3.419 14 O -0.531 6.531 15 C -0.156 4.156 16 C -0.204 4.204 17 S 0.195 5.805 18 C -0.245 4.245 19 C -0.025 4.025 20 O -0.533 6.533 21 Si 0.655 3.345 22 C -0.052 4.052 23 C -0.152 4.152 24 C -0.134 4.134 25 C -0.077 4.077 26 C -0.138 4.138 27 C -0.059 4.059 28 H 0.104 0.896 29 H 0.065 0.935 30 H 0.064 0.936 31 H 0.095 0.905 32 H 0.079 0.921 33 H 0.401 0.599 34 H 0.171 0.829 35 H 0.124 0.876 36 H 0.381 0.619 37 H -0.238 1.238 38 H -0.233 1.233 39 H 0.156 0.844 40 H 0.076 0.924 41 H 0.097 0.903 42 H 0.138 0.862 43 H 0.131 0.869 44 H 0.133 0.867 45 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.075 -6.564 -1.490 7.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.272 6.272 3 C 0.355 3.645 4 O -0.391 6.391 5 C -0.131 4.131 6 C -0.005 4.005 7 C -0.101 4.101 8 H 0.142 0.858 9 C -0.164 4.164 10 C 0.018 3.982 11 H 0.124 0.876 12 N -0.359 5.359 13 C 0.366 3.634 14 O -0.408 6.408 15 C -0.174 4.174 16 C -0.342 4.342 17 S 0.461 5.539 18 C -0.361 4.361 19 C -0.139 4.139 20 O -0.339 6.339 21 Si 0.555 3.445 22 C -0.081 4.081 23 C -0.191 4.191 24 C -0.152 4.152 25 C -0.095 4.095 26 C -0.156 4.156 27 C -0.077 4.077 28 H 0.122 0.878 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.113 0.887 32 H 0.098 0.902 33 H 0.237 0.763 34 H 0.189 0.811 35 H 0.141 0.859 36 H 0.228 0.772 37 H -0.162 1.162 38 H -0.156 1.156 39 H 0.174 0.826 40 H 0.094 0.906 41 H 0.115 0.885 42 H 0.155 0.845 43 H 0.149 0.851 44 H 0.150 0.850 45 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -3.770 -5.248 -1.237 6.580 hybrid contribution 1.426 -0.292 0.836 1.679 sum -2.344 -5.541 -0.401 6.029 Atomic orbital electron populations 1.23317 0.75542 1.04079 1.02721 1.86548 1.23870 1.32613 1.84164 1.21221 0.89098 0.81478 0.72684 1.90741 1.66942 1.35471 1.45899 1.18944 0.89010 0.94656 1.10530 1.19808 0.93773 0.93106 0.93787 1.22065 0.99431 0.89806 0.98753 0.85787 1.23261 1.03530 0.93522 0.96105 1.21781 0.85907 0.95294 0.95180 0.87579 1.45519 1.15327 1.09455 1.65556 1.17601 0.86852 0.81645 0.77257 1.90819 1.38309 1.58241 1.53456 1.20246 0.94549 0.94339 1.08243 1.25811 0.98148 1.04980 1.05283 1.83016 1.13706 0.97765 1.59406 1.24789 0.98980 1.00378 1.11987 1.24446 1.07082 0.91588 0.90757 1.86544 1.71942 1.52351 1.23056 0.95133 0.74439 0.87867 0.87091 1.21049 0.96658 0.94536 0.95881 1.23728 0.99896 0.95113 1.00345 1.21151 0.92680 0.99419 1.01924 1.21511 1.00626 0.92364 0.94986 1.21213 0.94346 0.98414 1.01632 1.21487 0.94057 0.97773 0.94413 0.87798 0.91670 0.91682 0.88667 0.90211 0.76327 0.81119 0.85860 0.77173 1.16154 1.15561 0.82622 0.90564 0.88513 0.84477 0.85071 0.84956 0.84414 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.06 10.56 101.05 1.07 1.01 16 2 O -0.36 -0.34 9.84 -40.52 -0.40 -0.73 16 3 C 0.51 0.95 7.84 34.61 0.27 1.22 16 4 O -0.50 -1.39 13.06 -19.24 -0.25 -1.64 16 5 C -0.13 -0.15 5.87 -104.98 -0.62 -0.76 16 6 C 0.00 0.00 5.35 -104.21 -0.56 -0.56 16 7 C -0.08 -0.02 2.67 -90.82 -0.24 -0.26 16 8 H 0.12 0.16 5.79 -51.93 -0.30 -0.14 16 9 C -0.13 0.01 7.32 -25.92 -0.19 -0.18 16 10 C 0.12 0.10 4.30 -67.12 -0.29 -0.19 16 11 H 0.11 0.22 7.50 -51.93 -0.39 -0.17 16 12 N -0.71 -0.70 5.23 -54.17 -0.28 -0.98 16 13 C 0.58 2.09 7.79 -12.63 -0.10 1.99 16 14 O -0.53 -3.89 16.41 5.24 0.09 -3.80 16 15 C -0.16 -0.31 5.98 -104.63 -0.63 -0.93 16 16 C -0.20 0.11 10.38 29.93 0.31 0.42 16 17 S 0.19 -0.24 20.20 -107.50 -2.17 -2.41 16 18 C -0.24 -0.10 5.65 -36.18 -0.20 -0.30 16 19 C -0.03 0.00 2.94 36.01 0.11 0.11 16 20 O -0.53 -0.23 12.88 -35.23 -0.45 -0.68 16 21 Si 0.66 -0.81 30.92 -169.99 -5.26 -6.07 16 22 C -0.05 -0.12 9.95 -39.02 -0.39 -0.51 16 23 C -0.15 0.01 7.17 -25.78 -0.18 -0.17 16 24 C -0.13 0.09 9.27 -39.64 -0.37 -0.28 16 25 C -0.08 0.10 10.04 -39.49 -0.40 -0.29 16 26 C -0.14 0.16 10.03 -39.64 -0.40 -0.23 16 27 C -0.06 0.01 9.62 -39.17 -0.38 -0.37 16 28 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 29 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.09 -0.06 8.09 -51.93 -0.42 -0.48 16 32 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.40 -0.36 7.20 -40.82 -0.29 -0.65 16 34 H 0.17 -0.50 7.01 -52.49 -0.37 -0.87 16 35 H 0.12 0.01 7.96 -51.93 -0.41 -0.40 16 36 H 0.38 -1.33 8.70 45.56 0.40 -0.94 16 37 H -0.24 -0.17 7.11 56.52 0.40 0.24 16 38 H -0.23 -0.35 7.11 56.52 0.40 0.05 16 39 H 0.16 0.50 8.06 -52.49 -0.42 0.07 16 40 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 41 H 0.10 -0.12 5.69 -51.93 -0.30 -0.42 16 42 H 0.14 -0.30 5.72 -52.49 -0.30 -0.60 16 43 H 0.13 -0.44 8.06 -52.48 -0.42 -0.86 16 44 H 0.13 -0.41 8.06 -52.49 -0.42 -0.84 16 45 H 0.14 -0.19 7.63 -52.49 -0.40 -0.59 16 LS Contribution 391.66 15.07 5.90 5.90 Total: 0.00 -8.53 391.66 -11.37 -19.90 By element: Atomic # 1 Polarization: -3.83 SS G_CDS: -5.36 Total: -9.20 kcal Atomic # 6 Polarization: 2.90 SS G_CDS: -3.18 Total: -0.28 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: -0.28 Total: -0.98 kcal Atomic # 8 Polarization: -5.83 SS G_CDS: -1.02 Total: -6.85 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.26 Total: -6.07 kcal Atomic # 16 Polarization: -0.24 SS G_CDS: -2.17 Total: -2.41 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -8.53 -11.37 -19.90 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15105874_6894386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.233 kcal (2) G-P(sol) polarization free energy of solvation -8.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.761 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.897 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.130 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds