Wall clock time and date at job start Sun Mar 7 2021 03:07:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.46821 * 2 1 4 4 C 1.50702 * 109.47360 * 240.00039 * 2 1 3 5 5 C 1.32688 * 124.68589 * 299.72202 * 4 2 1 6 6 C 1.44503 * 113.10061 * 179.85222 * 5 4 2 7 7 C 1.47046 * 123.49050 * 180.19776 * 6 5 4 8 8 O 1.21659 * 119.99884 * 180.27818 * 7 6 5 9 9 N 1.34772 * 120.00605 * 0.27792 * 7 6 5 10 10 C 1.46493 * 120.00619 * 180.02562 * 9 7 6 11 11 C 1.53000 * 109.47513 * 177.33693 * 10 9 7 12 12 C 1.53001 * 112.84878 * 66.09865 * 11 10 9 13 13 O 1.42907 * 109.47046 * 63.93732 * 12 11 10 14 14 C 1.53782 * 113.61407 * 197.40618 * 11 10 9 15 15 C 1.53786 * 87.07718 * 139.98163 * 14 11 10 16 16 H 1.08997 * 113.69022 * 89.12701 * 15 14 11 17 17 O 1.42897 * 113.61224 * 220.01676 * 15 14 11 18 18 C 1.42901 * 114.00287 * 247.49748 * 17 15 14 19 19 C 1.50700 * 109.47524 * 179.97438 * 18 17 15 20 20 C 1.38233 * 120.00049 * 269.73155 * 19 18 17 21 21 C 1.38236 * 119.99957 * 179.78464 * 20 19 18 22 22 C 1.38236 * 120.00022 * 0.44096 * 21 20 19 23 23 C 1.38239 * 119.99953 * 359.81159 * 22 21 20 24 24 C 1.38237 * 119.99562 * 89.99565 * 19 18 17 25 25 C 1.53777 * 113.61216 * 294.90393 * 11 10 9 26 26 C 1.36219 * 113.01685 * 0.42906 * 6 5 4 27 27 Cl 1.73601 * 124.60863 * 179.75079 * 26 6 5 28 28 S 1.70452 * 110.78949 * 359.76742 * 26 6 5 29 29 H 0.96705 * 114.00465 * 60.00035 * 1 2 3 30 30 H 1.09004 * 109.47136 * 119.99635 * 2 1 3 31 31 H 1.48497 * 110.00177 * 298.67901 * 3 2 1 32 32 H 1.48496 * 110.00173 * 60.00145 * 3 2 1 33 33 H 1.08006 * 123.44787 * 0.02562 * 5 4 2 34 34 H 0.97005 * 119.99770 * 359.97438 * 9 7 6 35 35 H 1.09003 * 109.46957 * 297.33968 * 10 9 7 36 36 H 1.08997 * 109.47460 * 57.33458 * 10 9 7 37 37 H 1.09002 * 109.47174 * 183.93401 * 12 11 10 38 38 H 1.08999 * 109.46993 * 303.94152 * 12 11 10 39 39 H 0.96696 * 114.00225 * 179.97438 * 13 12 11 40 40 H 1.08997 * 113.61239 * 254.52487 * 14 11 10 41 41 H 1.08992 * 113.61347 * 25.43219 * 14 11 10 42 42 H 1.08993 * 109.47279 * 300.00265 * 18 17 15 43 43 H 1.09007 * 109.46788 * 60.00179 * 18 17 15 44 44 H 1.08000 * 120.00241 * 0.02562 * 20 19 18 45 45 H 1.07998 * 120.00442 * 180.27717 * 21 20 19 46 46 H 1.07999 * 120.00682 * 179.83586 * 22 21 20 47 47 H 1.07999 * 120.00034 * 180.02562 * 23 22 21 48 48 H 1.07995 * 120.00497 * 359.97438 * 24 19 18 49 49 H 1.09000 * 113.61905 * 334.56586 * 25 11 10 50 50 H 1.09009 * 113.61141 * 105.38507 * 25 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6731 -1.9771 -1.5294 6 6 2.2778 -2.4012 -2.7714 7 6 2.1355 -3.7573 -3.3217 8 8 2.6770 -4.0476 -4.3717 9 7 1.4053 -4.6788 -2.6629 10 6 1.2639 -6.0300 -3.2108 11 6 0.4481 -6.8900 -2.2434 12 6 -1.0028 -6.4224 -2.1118 13 8 -1.6657 -6.5668 -3.3695 14 6 0.5903 -8.4008 -2.4923 15 6 0.6186 -8.5701 -0.9641 16 1 -0.3683 -8.6981 -0.5193 17 8 1.5610 -9.5452 -0.5136 18 6 0.9634 -10.7079 0.0637 19 6 2.0435 -11.6635 0.5009 20 6 2.5094 -12.6271 -0.3740 21 6 3.5033 -13.5008 0.0256 22 6 4.0249 -13.4169 1.3030 23 6 3.5553 -12.4566 2.1796 24 6 2.5645 -11.5800 1.7786 25 6 1.1440 -7.1266 -0.8927 26 6 2.9976 -1.4159 -3.3771 27 17 3.8526 -1.5992 -4.8767 28 16 2.9450 0.0213 -2.4622 29 1 -0.3934 0.4417 -0.7651 30 1 1.7923 -0.5138 0.8900 31 1 1.5878 2.4586 -1.2242 32 1 1.5614 2.4679 1.2085 33 1 1.0701 -2.6241 -0.9094 34 1 0.9738 -4.4475 -1.8254 35 1 0.7530 -5.9805 -4.1724 36 1 2.2509 -6.4723 -3.3462 37 1 -1.5124 -7.0264 -1.3611 38 1 -1.0211 -5.3754 -1.8096 39 1 -2.5919 -6.2891 -3.3602 40 1 -0.2833 -8.8495 -2.9652 41 1 1.5253 -8.6769 -2.9796 42 1 0.3635 -10.4179 0.9262 43 1 0.3262 -11.1938 -0.6753 44 1 2.0997 -12.6948 -1.3709 45 1 3.8706 -14.2507 -0.6594 46 1 4.7996 -14.1011 1.6161 47 1 3.9631 -12.3908 3.1775 48 1 2.1978 -10.8297 2.4633 49 1 2.2305 -7.0545 -0.9427 50 1 0.7183 -6.5456 -0.0745 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15111636_13431040.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:07:51 Heat of formation + Delta-G solvation = -72.688126 kcal Electronic energy + Delta-G solvation = -35198.311491 eV Core-core repulsion = 30310.975337 eV Total energy + Delta-G solvation = -4887.336154 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.099 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -41.62232 -40.72521 -40.13096 -38.95734 -38.13814 -37.95820 -37.02713 -36.68639 -35.36494 -32.75723 -31.82250 -31.72176 -29.71201 -27.64101 -27.02750 -26.84644 -26.65027 -25.19272 -23.51396 -22.86296 -22.27953 -22.21545 -20.83553 -19.65827 -19.32073 -18.51523 -18.15866 -18.01617 -17.86521 -17.42026 -16.88687 -16.69419 -16.59632 -16.50561 -16.30041 -15.91247 -15.78302 -15.71965 -15.52932 -15.15797 -15.02024 -14.71711 -14.53845 -14.37719 -14.29537 -13.98394 -13.91611 -13.89320 -13.84842 -13.37003 -13.35151 -12.96154 -12.84337 -12.71515 -12.60036 -12.48647 -12.15096 -12.11223 -11.95606 -11.81434 -11.72366 -11.67824 -11.43704 -11.02747 -10.83442 -10.73464 -10.42529 -10.23480 -9.88222 -9.85825 -9.78932 -9.65432 -5.04621 -0.63772 -0.19270 0.31016 0.46388 0.47852 0.71462 1.04385 1.19356 1.53924 1.90065 2.09808 2.16475 2.56954 3.05984 3.09051 3.24362 3.41440 3.48850 3.56206 3.68172 3.82448 3.84977 3.87777 3.90818 3.95803 4.08756 4.12114 4.16276 4.25951 4.33800 4.38761 4.42472 4.51335 4.54793 4.55756 4.61151 4.63909 4.73826 4.74742 4.76739 4.79363 4.87261 4.96622 5.01434 5.05249 5.12008 5.14900 5.19931 5.32783 5.51898 5.58798 5.62462 6.06304 6.28962 6.41706 6.42082 6.89094 7.11764 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.026 4.026 3 Si 0.701 3.299 4 C -0.224 4.224 5 C -0.068 4.068 6 C -0.166 4.166 7 C 0.568 3.432 8 O -0.563 6.563 9 N -0.702 5.702 10 C 0.150 3.850 11 C -0.086 4.086 12 C 0.098 3.902 13 O -0.590 6.590 14 C -0.139 4.139 15 C 0.064 3.936 16 H 0.110 0.890 17 O -0.386 6.386 18 C 0.102 3.898 19 C -0.108 4.108 20 C -0.115 4.115 21 C -0.135 4.135 22 C -0.125 4.125 23 C -0.133 4.133 24 C -0.111 4.111 25 C -0.116 4.116 26 C -0.140 4.140 27 Cl 0.001 6.999 28 S 0.265 5.735 29 H 0.390 0.610 30 H 0.152 0.848 31 H -0.260 1.260 32 H -0.268 1.268 33 H 0.181 0.819 34 H 0.413 0.587 35 H 0.055 0.945 36 H 0.055 0.945 37 H 0.070 0.930 38 H 0.064 0.936 39 H 0.398 0.602 40 H 0.076 0.924 41 H 0.077 0.923 42 H 0.074 0.926 43 H 0.064 0.936 44 H 0.128 0.872 45 H 0.136 0.864 46 H 0.139 0.861 47 H 0.140 0.860 48 H 0.135 0.865 49 H 0.086 0.914 50 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.836 1.683 7.860 8.907 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.138 4.138 3 Si 0.603 3.397 4 C -0.341 4.341 5 C -0.096 4.096 6 C -0.186 4.186 7 C 0.354 3.646 8 O -0.443 6.443 9 N -0.355 5.355 10 C 0.026 3.974 11 C -0.087 4.087 12 C 0.020 3.980 13 O -0.398 6.398 14 C -0.177 4.177 15 C 0.007 3.993 16 H 0.128 0.872 17 O -0.305 6.305 18 C 0.026 3.974 19 C -0.108 4.108 20 C -0.133 4.133 21 C -0.153 4.153 22 C -0.143 4.143 23 C -0.151 4.151 24 C -0.129 4.129 25 C -0.153 4.153 26 C -0.287 4.287 27 Cl 0.030 6.970 28 S 0.531 5.469 29 H 0.240 0.760 30 H 0.169 0.831 31 H -0.185 1.185 32 H -0.193 1.193 33 H 0.198 0.802 34 H 0.250 0.750 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.088 0.912 38 H 0.082 0.918 39 H 0.248 0.752 40 H 0.095 0.905 41 H 0.096 0.904 42 H 0.092 0.908 43 H 0.082 0.918 44 H 0.146 0.854 45 H 0.154 0.846 46 H 0.156 0.844 47 H 0.158 0.842 48 H 0.153 0.847 49 H 0.104 0.896 50 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -2.111 3.214 7.134 8.104 hybrid contribution -2.180 -1.515 -0.596 2.721 sum -4.291 1.699 6.538 8.002 Atomic orbital electron populations 1.86616 1.17268 1.80083 1.50226 1.24468 0.83643 1.09707 0.96026 0.94533 0.90809 0.74097 0.80214 1.24891 1.07258 0.98974 1.03015 1.21102 0.99415 0.95460 0.93655 1.20317 1.05190 0.94585 0.98474 1.17742 0.78691 0.84407 0.83794 1.90865 1.48514 1.80939 1.24002 1.45591 1.52011 1.11292 1.26583 1.21068 0.98913 0.80847 0.96589 1.21782 0.95029 0.95323 0.96558 1.21970 0.89822 1.00346 0.85866 1.86450 1.30416 1.89502 1.33471 1.23430 1.02741 0.94028 0.97489 1.23822 0.93547 0.88286 0.93673 0.87239 1.88030 1.34017 1.29135 1.79367 1.21440 0.92912 0.85214 0.97839 1.19849 0.99253 0.96941 0.94722 1.21302 0.97091 0.95332 0.99591 1.21452 0.97053 0.99729 0.97047 1.21537 1.00033 0.98766 0.93966 1.21482 0.97247 0.95606 1.00771 1.21321 0.96625 0.99023 0.95919 1.23240 1.01360 0.94836 0.95870 1.25836 1.03713 1.02597 0.96570 1.98426 1.73811 1.97285 1.27506 1.83268 1.45957 1.06838 1.10859 0.76030 0.83079 1.18545 1.19265 0.80194 0.74982 0.92646 0.92639 0.91179 0.91825 0.75214 0.90496 0.90420 0.90786 0.91751 0.85378 0.84564 0.84360 0.84210 0.84688 0.89585 0.87916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 2.76 12.85 -148.98 -1.91 0.85 16 2 C -0.03 0.19 2.94 71.24 0.21 0.40 16 3 Si 0.70 -4.25 30.91 68.60 2.12 -2.13 16 4 C -0.22 1.13 5.68 24.52 0.14 1.27 16 5 C -0.07 0.27 9.71 22.70 0.22 0.49 16 6 C -0.17 -0.55 5.98 -19.84 -0.12 -0.67 16 7 C 0.57 4.34 7.79 86.55 0.67 5.02 16 8 O -0.56 -9.24 14.91 -4.22 -0.06 -9.30 16 9 N -0.70 -0.59 5.25 -466.75 -2.45 -3.04 16 10 C 0.15 0.48 4.93 86.38 0.43 0.91 16 11 C -0.09 0.23 0.62 -51.66 -0.03 0.20 16 12 C 0.10 -0.60 6.19 71.98 0.45 -0.15 16 13 O -0.59 1.18 13.19 -148.98 -1.96 -0.78 16 14 C -0.14 -0.01 7.00 31.12 0.22 0.21 16 15 C 0.06 -0.16 3.96 31.12 0.12 -0.04 16 16 H 0.11 -0.74 7.34 -2.39 -0.02 -0.76 16 17 O -0.39 -1.15 10.34 -148.98 -1.54 -2.69 16 18 C 0.10 0.01 5.90 71.24 0.42 0.43 16 19 C -0.11 -0.37 5.51 -19.87 -0.11 -0.48 16 20 C -0.12 -0.43 9.70 22.27 0.22 -0.21 16 21 C -0.13 -0.38 10.05 22.27 0.22 -0.15 16 22 C -0.13 -0.26 10.05 22.27 0.22 -0.03 16 23 C -0.13 -0.24 10.05 22.27 0.22 -0.02 16 24 C -0.11 -0.27 9.70 22.27 0.22 -0.05 16 25 C -0.12 0.50 6.85 31.12 0.21 0.71 16 26 C -0.14 -0.65 6.87 67.35 0.46 -0.19 16 27 Cl 0.00 0.01 27.20 -2.72 -0.07 -0.07 16 28 S 0.27 -0.60 20.17 -56.49 -1.14 -1.74 16 29 H 0.39 -3.88 8.70 -74.05 -0.64 -4.52 16 30 H 0.15 -1.61 7.96 -2.38 -0.02 -1.63 16 31 H -0.26 0.55 7.11 99.48 0.71 1.26 16 32 H -0.27 -0.12 7.11 99.48 0.71 0.59 16 33 H 0.18 -1.71 7.10 -2.91 -0.02 -1.73 16 34 H 0.41 -2.45 6.27 -92.70 -0.58 -3.03 16 35 H 0.06 0.46 7.87 -2.39 -0.02 0.44 16 36 H 0.06 0.39 8.05 -2.39 -0.02 0.37 16 37 H 0.07 -0.67 7.31 -2.39 -0.02 -0.69 16 38 H 0.06 -0.58 7.40 -2.39 -0.02 -0.59 16 39 H 0.40 -3.95 9.12 -74.06 -0.68 -4.62 16 40 H 0.08 0.05 8.05 -2.39 -0.02 0.03 16 41 H 0.08 0.29 8.04 -2.39 -0.02 0.27 16 42 H 0.07 -0.26 8.09 -2.39 -0.02 -0.28 16 43 H 0.06 -0.10 8.08 -2.38 -0.02 -0.12 16 44 H 0.13 0.18 8.06 -2.91 -0.02 0.16 16 45 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 46 H 0.14 -0.27 8.06 -2.91 -0.02 -0.29 16 47 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 48 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 49 H 0.09 -0.05 8.10 -2.39 -0.02 -0.07 16 50 H 0.10 -0.96 8.10 -2.38 -0.02 -0.98 16 Total: 0.00 -24.65 444.38 -3.48 -28.13 By element: Atomic # 1 Polarization: -16.02 SS G_CDS: -0.85 Total: -16.87 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: 4.40 Total: 7.63 kcal Atomic # 7 Polarization: -0.59 SS G_CDS: -2.45 Total: -3.04 kcal Atomic # 8 Polarization: -6.44 SS G_CDS: -5.48 Total: -11.92 kcal Atomic # 14 Polarization: -4.25 SS G_CDS: 2.12 Total: -2.13 kcal Atomic # 16 Polarization: -0.60 SS G_CDS: -1.14 Total: -1.74 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -0.07 Total: -0.07 kcal Total: -24.65 -3.48 -28.13 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15111636_13431040.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.554 kcal (2) G-P(sol) polarization free energy of solvation -24.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.208 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.481 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.134 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds