Wall clock time and date at job start Sun Mar 7 2021 03:07:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86308 * 109.46897 * 2 1 4 4 C 1.50692 * 109.47594 * 119.99814 * 2 1 3 5 5 C 1.34179 * 125.43726 * 65.31106 * 4 2 1 6 6 C 1.47020 * 105.95673 * 180.14616 * 5 4 2 7 7 C 1.47379 * 127.19642 * 179.82927 * 6 5 4 8 8 O 1.21617 * 119.99467 * 359.71815 * 7 6 5 9 9 N 1.34778 * 120.00203 * 179.70730 * 7 6 5 10 10 C 1.46494 * 119.99806 * 180.02562 * 9 7 6 11 11 C 1.53003 * 109.47165 * 184.92431 * 10 9 7 12 12 C 1.52998 * 112.84973 * 63.63977 * 11 10 9 13 13 O 1.42904 * 109.47191 * 54.13793 * 12 11 10 14 14 C 1.53779 * 113.69270 * 194.91252 * 11 10 9 15 15 C 1.53790 * 87.08181 * 139.98812 * 14 11 10 16 16 H 1.08999 * 113.60862 * 89.11452 * 15 14 11 17 17 O 1.42896 * 113.69068 * 220.00916 * 15 14 11 18 18 C 1.42904 * 113.99782 * 247.53738 * 17 15 14 19 19 C 1.50704 * 109.46850 * 180.02562 * 18 17 15 20 20 C 1.38237 * 119.99597 * 269.72116 * 19 18 17 21 21 C 1.38232 * 119.99745 * 179.76840 * 20 19 18 22 22 C 1.38232 * 119.99870 * 0.50696 * 21 20 19 23 23 C 1.38226 * 120.00332 * 359.74919 * 22 21 20 24 24 C 1.38232 * 120.00154 * 89.99653 * 19 18 17 25 25 C 1.53779 * 87.08056 * 334.56919 * 15 14 11 26 26 C 1.36420 * 105.61190 * 359.57413 * 6 5 4 27 27 O 1.33644 * 108.39659 * 0.25948 * 26 6 5 28 28 H 0.96698 * 113.99893 * 299.99534 * 1 2 3 29 29 H 1.09000 * 109.47262 * 240.00492 * 2 1 3 30 30 H 1.48501 * 109.99890 * 300.00148 * 3 2 1 31 31 H 1.48493 * 109.99956 * 61.31788 * 3 2 1 32 32 H 1.07997 * 127.02417 * 359.97438 * 5 4 2 33 33 H 0.97001 * 120.00003 * 0.02562 * 9 7 6 34 34 H 1.08996 * 109.47683 * 64.92184 * 10 9 7 35 35 H 1.09003 * 109.47383 * 304.91587 * 10 9 7 36 36 H 1.08998 * 109.47720 * 294.13470 * 12 11 10 37 37 H 1.09010 * 109.47183 * 174.13406 * 12 11 10 38 38 H 0.96698 * 114.00182 * 179.97438 * 13 12 11 39 39 H 1.08996 * 113.61196 * 254.53332 * 14 11 10 40 40 H 1.09004 * 113.61450 * 25.44226 * 14 11 10 41 41 H 1.09002 * 109.46824 * 299.99996 * 18 17 15 42 42 H 1.08993 * 109.47495 * 60.00020 * 18 17 15 43 43 H 1.08007 * 119.99882 * 0.02562 * 20 19 18 44 44 H 1.07999 * 120.00172 * 180.23382 * 21 20 19 45 45 H 1.08007 * 119.99617 * 179.72415 * 22 21 20 46 46 H 1.08001 * 120.00286 * 179.97438 * 23 22 21 47 47 H 1.07996 * 120.00081 * 0.02562 * 24 19 18 48 48 H 1.09004 * 113.61286 * 270.88272 * 25 15 14 49 49 H 1.09001 * 113.69388 * 139.99345 * 25 15 14 50 50 H 1.08001 * 125.79968 * 180.25895 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.7603 -2.0134 1.5008 6 6 2.4124 -2.2460 2.7978 7 6 2.5000 -3.5189 3.5354 8 8 1.9927 -4.5241 3.0758 9 7 3.1424 -3.5690 4.7192 10 6 3.2299 -4.8345 5.4520 11 6 3.8960 -4.5934 6.8082 12 6 3.0798 -3.6705 7.7153 13 8 1.7525 -4.1836 7.8465 14 6 4.3664 -5.8820 7.5033 15 6 5.6215 -5.1013 7.9279 16 1 5.5117 -4.5827 8.8803 17 8 6.8270 -5.8645 7.8473 18 6 7.4206 -6.1489 9.1157 19 6 8.6788 -6.9531 8.9123 20 6 8.6212 -8.3342 8.8953 21 6 9.7745 -9.0718 8.7040 22 6 10.9870 -8.4285 8.5402 23 6 11.0455 -7.0477 8.5625 24 6 9.8914 -6.3099 8.7485 25 6 5.3794 -4.2011 6.7049 26 6 2.9245 -1.0385 3.1731 27 8 2.6269 -0.1420 2.2277 28 1 -0.3933 0.4416 0.7651 29 1 1.7924 -0.5137 -0.8900 30 1 1.5614 2.4680 -1.2085 31 1 1.5878 2.4586 1.2242 32 1 1.2460 -2.7419 0.8917 33 1 3.5468 -2.7672 5.0859 34 1 3.8223 -5.5468 4.8778 35 1 2.2281 -5.2355 5.6056 36 1 3.0421 -2.6724 7.2789 37 1 3.5485 -3.6197 8.6982 38 1 1.1776 -3.6477 8.4098 39 1 3.7353 -6.1822 8.3397 40 1 4.5736 -6.6998 6.8131 41 1 7.6649 -5.2142 9.6204 42 1 6.7195 -6.7186 9.7255 43 1 7.6743 -8.8368 9.0273 44 1 9.7290 -10.1506 8.6869 45 1 11.8888 -9.0049 8.3951 46 1 11.9929 -6.5451 8.4349 47 1 9.9371 -5.2310 8.7667 48 1 5.8635 -4.5594 5.7963 49 1 5.5659 -3.1442 6.8952 50 1 3.4766 -0.8408 4.0800 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15111636_13456056.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:07:57 Heat of formation + Delta-G solvation = -83.704924 kcal Electronic energy + Delta-G solvation = -32896.388710 eV Core-core repulsion = 28244.303945 eV Total energy + Delta-G solvation = -4652.084765 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.71451 -41.57298 -40.29480 -39.92532 -38.16197 -38.14801 -36.80768 -35.28605 -33.91231 -32.77548 -31.91770 -31.82027 -29.49980 -27.61617 -27.09284 -26.77893 -26.56041 -24.60816 -23.50849 -22.86670 -22.28840 -22.26341 -20.93058 -19.80218 -19.30179 -18.62079 -18.12425 -17.89853 -17.71446 -17.53847 -17.22103 -16.83140 -16.67252 -16.54163 -16.33578 -16.09121 -15.92035 -15.81535 -15.62810 -15.17210 -15.07827 -14.53070 -14.31540 -14.16410 -14.07822 -13.94751 -13.92280 -13.89982 -13.57687 -13.47496 -13.37468 -12.96322 -12.93817 -12.75601 -12.23208 -12.09248 -11.99451 -11.81027 -11.77582 -11.52514 -11.09109 -10.97847 -10.87266 -10.74368 -10.49500 -10.06292 -9.83383 -9.80779 -9.77222 -5.01732 0.24505 0.32721 0.48948 0.91020 1.10999 1.46516 1.70117 1.90599 2.08204 2.41659 2.52652 2.86152 3.05860 3.13029 3.29168 3.38428 3.42015 3.55116 3.60539 3.72930 3.81986 3.86974 3.92650 3.94280 3.99477 4.08759 4.21487 4.25473 4.28223 4.28961 4.32745 4.36122 4.41557 4.56247 4.59103 4.59563 4.67974 4.70310 4.71819 4.78294 4.88140 4.92717 5.03455 5.09211 5.11039 5.11335 5.23278 5.40858 5.52691 5.60422 5.63674 5.82626 6.05419 6.18674 6.22155 6.46242 6.52026 7.26734 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.705 3.295 4 C -0.057 4.057 5 C -0.122 4.122 6 C -0.234 4.234 7 C 0.587 3.413 8 O -0.530 6.530 9 N -0.724 5.724 10 C 0.145 3.855 11 C -0.096 4.096 12 C 0.099 3.901 13 O -0.564 6.564 14 C -0.135 4.135 15 C 0.063 3.937 16 H 0.089 0.911 17 O -0.364 6.364 18 C 0.102 3.898 19 C -0.094 4.094 20 C -0.099 4.099 21 C -0.123 4.123 22 C -0.113 4.113 23 C -0.123 4.123 24 C -0.099 4.099 25 C -0.124 4.124 26 C 0.029 3.971 27 O -0.166 6.166 28 H 0.380 0.620 29 H 0.138 0.862 30 H -0.249 1.249 31 H -0.256 1.256 32 H 0.162 0.838 33 H 0.395 0.605 34 H 0.071 0.929 35 H 0.083 0.917 36 H 0.048 0.952 37 H 0.051 0.949 38 H 0.383 0.617 39 H 0.078 0.922 40 H 0.097 0.903 41 H 0.058 0.942 42 H 0.059 0.941 43 H 0.123 0.877 44 H 0.124 0.876 45 H 0.123 0.877 46 H 0.124 0.876 47 H 0.122 0.878 48 H 0.102 0.898 49 H 0.076 0.924 50 H 0.212 0.788 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.339 4.702 5.093 8.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.145 4.145 3 Si 0.604 3.396 4 C -0.105 4.105 5 C -0.142 4.142 6 C -0.239 4.239 7 C 0.374 3.626 8 O -0.407 6.407 9 N -0.375 5.375 10 C 0.022 3.978 11 C -0.097 4.097 12 C 0.021 3.979 13 O -0.370 6.370 14 C -0.173 4.173 15 C 0.005 3.995 16 H 0.106 0.894 17 O -0.283 6.283 18 C 0.026 3.974 19 C -0.094 4.094 20 C -0.117 4.117 21 C -0.141 4.141 22 C -0.131 4.131 23 C -0.141 4.141 24 C -0.117 4.117 25 C -0.162 4.162 26 C -0.041 4.041 27 O -0.062 6.062 28 H 0.229 0.771 29 H 0.156 0.844 30 H -0.173 1.173 31 H -0.180 1.180 32 H 0.180 0.820 33 H 0.228 0.772 34 H 0.089 0.911 35 H 0.101 0.899 36 H 0.066 0.934 37 H 0.069 0.931 38 H 0.230 0.770 39 H 0.097 0.903 40 H 0.116 0.884 41 H 0.076 0.924 42 H 0.077 0.923 43 H 0.141 0.859 44 H 0.142 0.858 45 H 0.141 0.859 46 H 0.142 0.858 47 H 0.140 0.860 48 H 0.120 0.880 49 H 0.095 0.905 50 H 0.228 0.772 Dipole moment (debyes) X Y Z Total from point charges 4.220 4.258 3.632 7.009 hybrid contribution -1.099 0.414 1.559 1.951 sum 3.120 4.672 5.190 7.649 Atomic orbital electron populations 1.86682 1.16658 1.80132 1.49190 1.24401 0.84024 1.12286 0.93763 0.94452 0.91273 0.73008 0.80903 1.22666 1.01875 0.93340 0.92655 1.22557 1.01040 0.95298 0.95280 1.21557 1.08929 0.94353 0.99066 1.17227 0.77989 0.87087 0.80290 1.90830 1.46383 1.35710 1.67750 1.45723 1.57673 1.12734 1.21395 1.21192 1.02124 0.85261 0.89232 1.21847 0.94147 0.98280 0.95396 1.21863 0.83393 0.95003 0.97596 1.86499 1.22383 1.54742 1.73382 1.23478 0.96147 0.96572 1.01071 1.23687 0.84508 0.93010 0.98335 0.89365 1.88058 1.38841 1.73004 1.28375 1.21375 0.92083 0.97905 0.86035 1.19576 0.93913 0.93768 1.02142 1.21086 0.98617 0.93268 0.98697 1.21197 0.92641 1.00155 1.00093 1.21258 0.98037 0.94773 0.99052 1.21188 0.98416 0.94245 1.00286 1.21065 0.92100 0.99930 0.98630 1.23335 0.93132 0.99897 0.99802 1.24420 0.99705 0.86789 0.93233 1.83682 1.57198 1.38911 1.26447 0.77135 0.84442 1.17338 1.18050 0.82026 0.77157 0.91118 0.89864 0.93427 0.93091 0.76987 0.90284 0.88446 0.92362 0.92283 0.85918 0.85765 0.85852 0.85787 0.85977 0.87968 0.90523 0.77152 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.40 12.88 -35.23 -0.45 -0.86 16 2 C -0.04 0.02 2.97 36.00 0.11 0.13 16 3 Si 0.70 -1.02 32.09 -169.99 -5.46 -6.48 16 4 C -0.06 -0.03 6.18 -35.74 -0.22 -0.25 16 5 C -0.12 -0.28 10.90 -37.45 -0.41 -0.68 16 6 C -0.23 -0.37 6.31 -103.27 -0.65 -1.02 16 7 C 0.59 1.93 7.81 -12.54 -0.10 1.83 16 8 O -0.53 -4.19 16.98 5.26 0.09 -4.10 16 9 N -0.72 0.16 5.29 -61.40 -0.32 -0.16 16 10 C 0.15 0.09 4.82 -4.04 -0.02 0.07 16 11 C -0.10 0.18 0.67 -153.69 -0.10 0.07 16 12 C 0.10 -0.29 6.14 37.16 0.23 -0.06 16 13 O -0.56 0.58 12.96 -35.23 -0.46 0.12 16 14 C -0.13 0.13 7.06 -25.92 -0.18 -0.06 16 15 C 0.06 -0.10 3.96 -25.92 -0.10 -0.20 16 16 H 0.09 -0.27 7.34 -51.93 -0.38 -0.65 16 17 O -0.36 -0.34 10.34 -35.23 -0.36 -0.71 16 18 C 0.10 -0.03 5.90 36.01 0.21 0.18 16 19 C -0.09 -0.11 5.51 -104.62 -0.58 -0.69 16 20 C -0.10 -0.11 9.70 -39.58 -0.38 -0.50 16 21 C -0.12 -0.10 10.05 -39.59 -0.40 -0.50 16 22 C -0.11 -0.08 10.05 -39.59 -0.40 -0.47 16 23 C -0.12 -0.08 10.05 -39.59 -0.40 -0.48 16 24 C -0.10 -0.09 9.70 -39.58 -0.38 -0.47 16 25 C -0.12 0.31 6.87 -25.92 -0.18 0.13 16 26 C 0.03 -0.05 11.61 30.08 0.35 0.30 16 27 O -0.17 0.06 8.90 7.68 0.07 0.13 16 28 H 0.38 -0.80 8.70 45.56 0.40 -0.41 16 29 H 0.14 -0.26 7.96 -51.93 -0.41 -0.68 16 30 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 31 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 32 H 0.16 0.45 8.06 -52.49 -0.42 0.03 16 33 H 0.39 -1.38 6.81 -40.82 -0.28 -1.66 16 34 H 0.07 0.11 8.11 -51.93 -0.42 -0.31 16 35 H 0.08 0.26 7.66 -51.93 -0.40 -0.14 16 36 H 0.05 -0.21 7.62 -51.93 -0.40 -0.60 16 37 H 0.05 -0.20 7.31 -51.92 -0.38 -0.58 16 38 H 0.38 -1.84 9.12 45.56 0.42 -1.42 16 39 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 40 H 0.10 0.01 8.08 -51.93 -0.42 -0.41 16 41 H 0.06 -0.09 8.09 -51.93 -0.42 -0.51 16 42 H 0.06 -0.07 8.08 -51.93 -0.42 -0.49 16 43 H 0.12 -0.02 8.06 -52.48 -0.42 -0.45 16 44 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 45 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 46 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 47 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 48 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 49 H 0.08 -0.32 8.10 -51.93 -0.42 -0.74 16 50 H 0.21 -1.32 7.47 -52.49 -0.39 -1.72 16 LS Contribution 424.92 15.07 6.40 6.40 Total: 0.00 -11.38 424.92 -10.60 -21.98 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -6.50 Total: -13.68 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -3.61 Total: -2.65 kcal Atomic # 7 Polarization: 0.16 SS G_CDS: -0.32 Total: -0.16 kcal Atomic # 8 Polarization: -4.30 SS G_CDS: -1.12 Total: -5.42 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.46 Total: -6.48 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -11.38 -10.60 -21.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15111636_13456056.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.724 kcal (2) G-P(sol) polarization free energy of solvation -11.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.102 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.603 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.981 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.705 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds