Wall clock time and date at job start Sun Mar 7 2021 03:09:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37638 * 125.67271 * 2 1 4 4 C 1.46664 * 126.23178 * 0.02562 * 3 2 1 5 5 O 1.21696 * 120.00527 * 187.57882 * 4 3 2 6 6 N 1.34785 * 119.99763 * 7.57789 * 4 3 2 7 7 C 1.46494 * 119.99934 * 175.69270 * 6 4 3 8 8 C 1.53000 * 109.46803 * 184.97808 * 7 6 4 9 9 C 1.52998 * 112.85149 * 76.01995 * 8 7 6 10 10 O 1.42909 * 109.47042 * 55.44587 * 9 8 7 11 11 C 1.53783 * 113.61175 * 207.32417 * 8 7 6 12 12 C 1.53781 * 87.08354 * 139.98446 * 11 8 7 13 13 H 1.08999 * 113.69306 * 89.12089 * 12 11 8 14 14 O 1.42896 * 113.61683 * 220.02344 * 12 11 8 15 15 C 1.42906 * 113.99784 * 247.49260 * 14 12 11 16 16 C 1.50697 * 109.46998 * 179.97438 * 15 14 12 17 17 C 1.38241 * 120.00144 * 269.72419 * 16 15 14 18 18 C 1.38233 * 119.99902 * 179.77015 * 17 16 15 19 19 C 1.38231 * 120.00295 * 0.50587 * 18 17 16 20 20 C 1.38238 * 119.99860 * 359.74605 * 19 18 17 21 21 C 1.38231 * 120.00189 * 90.00019 * 16 15 14 22 22 C 1.53774 * 113.61728 * 304.81937 * 8 7 6 23 23 C 1.37891 * 107.54690 * 180.27852 * 3 2 1 24 24 C 1.39878 * 107.09202 * 359.76367 * 23 3 2 25 25 Br 1.89099 * 126.07632 * 179.97438 * 24 23 3 26 26 C 1.35505 * 107.85423 * 0.02562 * 24 23 3 27 27 C 1.50697 * 125.57367 * 179.97438 * 26 24 23 28 28 O 1.42904 * 109.47348 * 65.15658 * 27 26 24 29 29 Si 1.86300 * 109.47258 * 305.15561 * 27 26 24 30 30 H 1.09003 * 109.46624 * 277.73091 * 1 2 3 31 31 H 1.08995 * 109.47750 * 37.73203 * 1 2 3 32 32 H 1.08998 * 109.46973 * 157.73904 * 1 2 3 33 33 H 0.96999 * 119.99507 * 355.69164 * 6 4 3 34 34 H 1.08994 * 109.47557 * 304.97680 * 7 6 4 35 35 H 1.09001 * 109.47444 * 64.98087 * 7 6 4 36 36 H 1.09001 * 109.47152 * 175.44632 * 9 8 7 37 37 H 1.08998 * 109.47090 * 295.44620 * 9 8 7 38 38 H 0.96700 * 113.99231 * 180.02562 * 10 9 8 39 39 H 1.09007 * 113.61664 * 254.52576 * 11 8 7 40 40 H 1.08998 * 113.61763 * 25.43231 * 11 8 7 41 41 H 1.09000 * 109.46894 * 299.99653 * 15 14 12 42 42 H 1.08999 * 109.47037 * 59.99973 * 15 14 12 43 43 H 1.08002 * 119.99525 * 0.02562 * 17 16 15 44 44 H 1.08004 * 119.99660 * 180.23207 * 18 17 16 45 45 H 1.08002 * 120.00309 * 179.73058 * 19 18 17 46 46 H 1.07998 * 120.00138 * 179.97438 * 20 19 18 47 47 H 1.08000 * 119.99699 * 0.02562 * 21 16 15 48 48 H 1.09005 * 113.61630 * 334.56863 * 22 8 7 49 49 H 1.09001 * 113.61756 * 105.46870 * 22 8 7 50 50 H 1.07995 * 126.45797 * 179.78029 * 23 3 2 51 51 H 1.09001 * 109.46987 * 185.15695 * 27 26 24 52 52 H 0.96695 * 113.99520 * 300.00530 * 28 27 26 53 53 H 1.48495 * 110.00315 * 174.99762 * 29 27 26 54 54 H 1.48494 * 110.00270 * 296.32065 * 29 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 0.0005 5 8 2.6160 3.4152 -0.1385 6 7 0.5030 2.7933 0.1550 7 6 0.0592 4.1862 0.2502 8 6 -1.4419 4.2241 0.5440 9 6 -1.7709 3.8902 2.0004 10 8 -1.0501 4.7703 2.8654 11 6 -2.1384 5.4947 0.0288 12 6 -3.3094 4.5892 -0.3878 13 1 -4.0562 4.4513 0.3942 14 8 -3.8839 4.9398 -1.6483 15 6 -5.2164 5.4485 -1.5583 16 6 -5.7200 5.7843 -2.9384 17 6 -5.5243 7.0510 -3.4563 18 6 -5.9821 7.3576 -4.7241 19 6 -6.6448 6.4009 -5.4699 20 6 -6.8451 5.1357 -4.9499 21 6 -6.3827 4.8275 -3.6842 22 6 -2.2887 3.4421 -0.4738 23 6 3.5781 0.6891 -0.0064 24 6 3.5529 -0.7094 -0.0047 25 35 5.0609 -1.8503 -0.0121 26 6 2.2559 -1.1015 0.0019 27 6 1.7714 -2.5285 0.0052 28 8 2.1603 -3.1608 1.2264 29 14 2.5224 -3.4427 -1.4339 30 1 -0.3633 0.1382 1.0184 31 1 -0.3634 0.8127 -0.6288 32 1 -0.3633 -0.9511 -0.3893 33 1 -0.1452 2.0733 0.2031 34 1 0.5995 4.6855 1.0544 35 1 0.2579 4.6961 -0.6924 36 1 -2.8410 4.0118 2.1682 37 1 -1.4849 2.8596 2.2104 38 1 -1.2105 4.6153 3.8063 39 1 -2.3934 6.2031 0.8171 40 1 -1.6272 5.9623 -0.8127 41 1 -5.8632 4.6952 -1.1085 42 1 -5.2213 6.3471 -0.9415 43 1 -5.0101 7.7998 -2.8720 44 1 -5.8259 8.3462 -5.1302 45 1 -7.0063 6.6417 -6.4587 46 1 -7.3632 4.3883 -5.5324 47 1 -6.5398 3.8394 -3.2776 48 1 -1.8186 3.3484 -1.4528 49 1 -2.6650 2.4932 -0.0913 50 1 4.4582 1.3150 -0.0114 51 1 0.6850 -2.5435 -0.0818 52 1 3.1162 -3.1836 1.3703 53 1 2.1495 -4.8788 -1.3738 54 1 2.0544 -2.8496 -2.7124 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15111636_5000100.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:09:56 Heat of formation + Delta-G solvation = -40.453999 kcal Electronic energy + Delta-G solvation = -38128.229043 eV Core-core repulsion = 33080.382819 eV Total energy + Delta-G solvation = -5047.846224 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 465.103 amu Computer time = 2.04 seconds Orbital eigenvalues (eV) -43.00131 -41.53330 -40.35509 -40.02738 -38.13778 -37.92553 -36.79718 -35.85971 -34.40926 -32.79219 -32.34185 -31.84325 -31.27381 -29.57697 -27.73758 -27.66865 -27.06407 -26.77844 -26.32139 -23.55288 -23.53327 -22.67273 -22.30375 -21.70022 -20.93220 -19.64335 -19.01417 -18.56284 -18.32861 -17.96950 -17.69176 -17.35190 -17.09785 -16.81768 -16.58807 -16.52668 -16.29421 -16.03284 -15.79579 -15.74098 -15.50895 -15.15990 -15.11256 -14.94349 -14.57433 -14.32427 -14.16039 -14.10083 -14.07940 -14.02719 -13.88919 -13.82981 -13.43924 -13.41538 -13.25199 -12.92095 -12.76125 -12.61460 -12.37067 -12.18081 -12.02956 -11.99021 -11.80191 -11.75067 -11.57519 -11.48594 -11.35989 -10.88379 -10.86614 -10.47152 -10.38075 -9.87938 -9.87312 -9.81102 -9.38449 -4.96441 0.04938 0.28860 0.44318 0.45308 0.88216 1.16393 1.49313 1.57761 1.84019 1.92207 2.07771 2.53835 2.99061 3.05853 3.11978 3.30184 3.37330 3.47154 3.49879 3.56916 3.62644 3.71636 3.81668 3.87172 3.90784 4.03631 4.05858 4.09624 4.11264 4.19496 4.23848 4.31724 4.35764 4.39629 4.46345 4.48205 4.50419 4.56631 4.57905 4.60288 4.67795 4.72353 4.73324 4.81753 4.92358 5.03219 5.09512 5.09883 5.11165 5.18078 5.22875 5.44912 5.49835 5.56926 5.60116 5.71401 6.04189 6.23660 6.25560 6.35145 6.84958 6.91188 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 N -0.403 5.403 3 C -0.054 4.054 4 C 0.589 3.411 5 O -0.565 6.565 6 N -0.715 5.715 7 C 0.143 3.857 8 C -0.089 4.089 9 C 0.097 3.903 10 O -0.590 6.590 11 C -0.140 4.140 12 C 0.066 3.934 13 H 0.112 0.888 14 O -0.385 6.385 15 C 0.102 3.898 16 C -0.107 4.107 17 C -0.115 4.115 18 C -0.135 4.135 19 C -0.125 4.125 20 C -0.134 4.134 21 C -0.111 4.111 22 C -0.123 4.123 23 C -0.084 4.084 24 C -0.188 4.188 25 Br 0.031 6.969 26 C 0.064 3.936 27 C -0.043 4.043 28 O -0.538 6.538 29 Si 0.697 3.303 30 H 0.113 0.887 31 H 0.104 0.896 32 H 0.123 0.877 33 H 0.408 0.592 34 H 0.063 0.937 35 H 0.057 0.943 36 H 0.072 0.928 37 H 0.061 0.939 38 H 0.398 0.602 39 H 0.077 0.923 40 H 0.079 0.921 41 H 0.075 0.925 42 H 0.065 0.935 43 H 0.129 0.871 44 H 0.136 0.864 45 H 0.138 0.862 46 H 0.139 0.861 47 H 0.136 0.864 48 H 0.089 0.911 49 H 0.106 0.894 50 H 0.157 0.843 51 H 0.137 0.863 52 H 0.388 0.612 53 H -0.261 1.261 54 H -0.275 1.275 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.440 -3.415 2.607 8.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 N -0.079 5.079 3 C -0.167 4.167 4 C 0.377 3.623 5 O -0.444 6.444 6 N -0.371 5.371 7 C 0.019 3.981 8 C -0.090 4.090 9 C 0.019 3.981 10 O -0.399 6.399 11 C -0.178 4.178 12 C 0.008 3.992 13 H 0.130 0.870 14 O -0.305 6.305 15 C 0.026 3.974 16 C -0.108 4.108 17 C -0.133 4.133 18 C -0.153 4.153 19 C -0.143 4.143 20 C -0.152 4.152 21 C -0.129 4.129 22 C -0.161 4.161 23 C -0.112 4.112 24 C -0.274 4.274 25 Br 0.115 6.885 26 C -0.058 4.058 27 C -0.154 4.154 28 O -0.345 6.345 29 Si 0.598 3.402 30 H 0.131 0.869 31 H 0.122 0.878 32 H 0.141 0.859 33 H 0.251 0.749 34 H 0.082 0.918 35 H 0.075 0.925 36 H 0.090 0.910 37 H 0.080 0.920 38 H 0.249 0.751 39 H 0.096 0.904 40 H 0.098 0.902 41 H 0.093 0.907 42 H 0.083 0.917 43 H 0.147 0.853 44 H 0.154 0.846 45 H 0.156 0.844 46 H 0.157 0.843 47 H 0.153 0.847 48 H 0.108 0.892 49 H 0.125 0.875 50 H 0.175 0.825 51 H 0.154 0.846 52 H 0.238 0.762 53 H -0.186 1.186 54 H -0.201 1.201 Dipole moment (debyes) X Y Z Total from point charges -7.254 -3.463 1.149 8.120 hybrid contribution -1.012 0.585 0.810 1.422 sum -8.266 -2.878 1.958 8.969 Atomic orbital electron populations 1.22922 0.74263 1.07413 1.06364 1.44081 1.07685 1.03839 1.52344 1.20311 0.91000 0.86327 1.19076 1.17088 0.82790 0.86247 0.76215 1.90866 1.55007 1.47171 1.51370 1.46257 1.06988 1.09979 1.73900 1.21172 0.94072 0.81631 1.01185 1.21822 0.92448 0.99532 0.95151 1.21981 0.95960 0.93055 0.87061 1.86451 1.71239 1.60329 1.21863 1.23495 0.96947 0.96480 1.00870 1.23794 0.93704 0.95328 0.86347 0.87027 1.88031 1.28939 1.83497 1.30003 1.21443 0.83593 0.99106 0.93243 1.19850 0.99785 0.94395 0.96725 1.21310 0.99104 0.96686 0.96181 1.21454 0.98630 1.00510 0.94707 1.21535 0.98413 0.93713 1.00677 1.21478 1.00275 0.97407 0.96009 1.21316 0.97549 0.99375 0.94628 1.23324 0.95330 0.98522 0.98890 1.21271 0.95808 0.92872 1.01210 1.20822 0.91714 0.94407 1.20439 1.96600 1.34953 1.59834 1.97121 1.21051 0.89476 0.90284 1.04967 1.24749 1.05060 0.87721 0.97857 1.86506 1.30255 1.78898 1.38792 0.92971 0.94920 0.78116 0.74180 0.86890 0.87837 0.85888 0.74948 0.91846 0.92458 0.91017 0.92039 0.75136 0.90381 0.90212 0.90698 0.91674 0.85319 0.84597 0.84441 0.84289 0.84651 0.89229 0.87541 0.82548 0.84613 0.76183 1.18552 1.20077 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.30 9.32 127.77 1.19 0.89 16 2 N -0.40 0.41 3.16 -519.61 -1.64 -1.23 16 3 C -0.05 -0.26 6.88 40.35 0.28 0.02 16 4 C 0.59 4.51 7.76 86.44 0.67 5.18 16 5 O -0.57 -9.37 16.90 -4.34 -0.07 -9.44 16 6 N -0.71 -0.18 5.22 -467.10 -2.44 -2.62 16 7 C 0.14 0.30 5.10 86.38 0.44 0.74 16 8 C -0.09 0.38 0.76 -51.66 -0.04 0.34 16 9 C 0.10 -0.71 6.33 71.98 0.46 -0.25 16 10 O -0.59 1.59 12.83 -148.98 -1.91 -0.32 16 11 C -0.14 0.28 7.05 31.12 0.22 0.50 16 12 C 0.07 -0.32 3.96 31.12 0.12 -0.19 16 13 H 0.11 -1.03 7.34 -2.39 -0.02 -1.05 16 14 O -0.39 -0.33 10.34 -148.98 -1.54 -1.87 16 15 C 0.10 -0.17 5.90 71.23 0.42 0.25 16 16 C -0.11 -0.22 5.51 -19.87 -0.11 -0.33 16 17 C -0.11 -0.30 9.70 22.27 0.22 -0.09 16 18 C -0.14 -0.27 10.05 22.27 0.22 -0.04 16 19 C -0.13 -0.17 10.05 22.27 0.22 0.05 16 20 C -0.13 -0.14 10.05 22.27 0.22 0.09 16 21 C -0.11 -0.14 9.70 22.27 0.22 0.08 16 22 C -0.12 0.87 6.24 31.12 0.19 1.07 16 23 C -0.08 -0.49 10.64 22.58 0.24 -0.25 16 24 C -0.19 -0.46 6.04 22.03 0.13 -0.33 16 25 Br 0.03 -0.03 29.41 -20.37 -0.60 -0.63 16 26 C 0.06 0.02 5.48 41.34 0.23 0.25 16 27 C -0.04 0.08 2.82 71.23 0.20 0.28 16 28 O -0.54 0.05 12.88 -148.98 -1.92 -1.87 16 29 Si 0.70 -0.09 29.67 68.60 2.04 1.94 16 30 H 0.11 -1.58 8.07 -2.39 -0.02 -1.60 16 31 H 0.10 -1.25 6.09 -2.39 -0.01 -1.27 16 32 H 0.12 -1.72 6.60 -2.39 -0.02 -1.73 16 33 H 0.41 -2.62 3.61 -92.71 -0.33 -2.95 16 34 H 0.06 0.47 7.39 -2.39 -0.02 0.45 16 35 H 0.06 0.30 7.85 -2.39 -0.02 0.28 16 36 H 0.07 -0.78 7.32 -2.39 -0.02 -0.80 16 37 H 0.06 -0.63 8.14 -2.39 -0.02 -0.65 16 38 H 0.40 -4.17 9.12 -74.06 -0.68 -4.85 16 39 H 0.08 -0.13 8.10 -2.38 -0.02 -0.15 16 40 H 0.08 0.13 7.90 -2.39 -0.02 0.11 16 41 H 0.07 -0.40 8.09 -2.39 -0.02 -0.42 16 42 H 0.07 -0.21 8.08 -2.39 -0.02 -0.23 16 43 H 0.13 0.03 8.06 -2.91 -0.02 0.01 16 44 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 45 H 0.14 -0.34 8.06 -2.91 -0.02 -0.36 16 46 H 0.14 -0.41 8.06 -2.91 -0.02 -0.44 16 47 H 0.14 -0.33 8.06 -2.91 -0.02 -0.36 16 48 H 0.09 -0.36 8.10 -2.38 -0.02 -0.38 16 49 H 0.11 -1.39 8.10 -2.39 -0.02 -1.41 16 50 H 0.16 0.98 8.06 -2.91 -0.02 0.96 16 51 H 0.14 -0.83 6.29 -2.39 -0.02 -0.85 16 52 H 0.39 -1.40 7.18 -74.06 -0.53 -1.93 16 53 H -0.26 -1.09 7.11 99.48 0.71 -0.38 16 54 H -0.28 -1.33 7.11 99.48 0.71 -0.62 16 Total: 0.00 -25.70 455.66 -2.88 -28.58 By element: Atomic # 1 Polarization: -20.27 SS G_CDS: -0.54 Total: -20.81 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: 5.75 Total: 8.26 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -4.08 Total: -3.84 kcal Atomic # 8 Polarization: -8.05 SS G_CDS: -5.44 Total: -13.50 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: 2.04 Total: 1.94 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.60 Total: -0.63 kcal Total: -25.70 -2.88 -28.58 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15111636_5000100.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.875 kcal (2) G-P(sol) polarization free energy of solvation -25.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.571 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.579 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.454 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.04 seconds