Wall clock time and date at job start Sun Mar 7 2021 03:10:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47276 * 2 1 4 4 C 1.50701 * 109.47335 * 239.99918 * 2 1 3 5 5 C 1.35456 * 125.56551 * 120.01894 * 4 2 1 6 6 C 1.39832 * 107.86423 * 179.97438 * 5 4 2 7 7 C 1.37862 * 107.08962 * 0.02562 * 6 5 4 8 8 C 1.46674 * 126.23681 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00120 * 0.02562 * 8 7 6 10 10 N 1.34780 * 120.00157 * 180.02562 * 8 7 6 11 11 C 1.46500 * 119.99777 * 180.02562 * 10 8 7 12 12 C 1.53006 * 109.46853 * 181.18715 * 11 10 8 13 13 C 1.52995 * 112.84887 * 294.46000 * 12 11 10 14 14 O 1.42901 * 109.47329 * 299.08339 * 13 12 11 15 15 C 1.53777 * 113.61565 * 65.65783 * 12 11 10 16 16 C 1.53781 * 87.07973 * 140.06395 * 15 12 11 17 17 H 1.08998 * 113.61132 * 89.20492 * 16 15 12 18 18 O 1.42901 * 113.61233 * 220.01543 * 16 15 12 19 19 C 1.42904 * 114.00179 * 209.99993 * 18 16 15 20 20 C 1.50692 * 109.47316 * 180.02562 * 19 18 16 21 21 C 1.38236 * 120.00146 * 269.72860 * 20 19 18 22 22 C 1.38236 * 120.00029 * 179.74860 * 21 20 19 23 23 C 1.38239 * 119.99797 * 0.54563 * 22 21 20 24 24 C 1.38231 * 119.99985 * 359.70803 * 23 22 21 25 25 C 1.38229 * 120.00019 * 0.02562 * 24 23 22 26 26 C 1.53778 * 113.61324 * 163.26450 * 12 11 10 27 27 N 1.35533 * 125.56653 * 300.25210 * 4 2 1 28 28 H 0.96703 * 114.00079 * 60.00322 * 1 2 3 29 29 H 1.09000 * 109.47050 * 120.00276 * 2 1 3 30 30 H 1.48500 * 110.00083 * 298.68210 * 3 2 1 31 31 H 1.48504 * 109.99910 * 59.99951 * 3 2 1 32 32 H 1.08006 * 126.06370 * 359.95509 * 5 4 2 33 33 H 1.08005 * 126.45094 * 180.02562 * 6 5 4 34 34 H 0.96997 * 119.99828 * 0.02562 * 10 8 7 35 35 H 1.08998 * 109.47584 * 61.18531 * 11 10 8 36 36 H 1.09009 * 109.47295 * 301.18341 * 11 10 8 37 37 H 1.08995 * 109.47078 * 179.08034 * 13 12 11 38 38 H 1.09008 * 109.46955 * 59.08252 * 13 12 11 39 39 H 0.96701 * 114.00143 * 180.02562 * 14 13 12 40 40 H 1.08998 * 113.61783 * 254.61519 * 15 12 11 41 41 H 1.09006 * 113.61575 * 25.51817 * 15 12 11 42 42 H 1.09003 * 109.46819 * 300.00805 * 19 18 16 43 43 H 1.08997 * 109.46848 * 59.99889 * 19 18 16 44 44 H 1.08005 * 119.99945 * 359.97438 * 21 20 19 45 45 H 1.07995 * 120.00081 * 180.27376 * 22 21 20 46 46 H 1.08002 * 119.99469 * 179.73087 * 23 22 21 47 47 H 1.08003 * 119.99765 * 180.02562 * 24 23 22 48 48 H 1.08004 * 120.00097 * 179.97438 * 25 24 23 49 49 H 1.09004 * 113.61750 * 334.48758 * 26 12 11 50 50 H 1.09003 * 113.61211 * 105.38289 * 26 12 11 51 51 H 0.97002 * 125.67499 * 0.07143 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7137 -0.1637 -2.1916 6 6 2.9578 -1.1461 -3.1563 7 6 2.3024 -2.2878 -2.7467 8 6 2.2788 -3.5740 -3.4513 9 8 2.8780 -3.7030 -4.5026 10 7 1.5934 -4.6130 -2.9344 11 6 1.5703 -5.8978 -3.6379 12 6 0.7042 -6.8901 -2.8593 13 6 1.2922 -7.2472 -1.4927 14 8 2.5720 -7.8578 -1.6697 15 6 -0.7828 -6.5015 -2.8075 16 6 -1.0986 -7.9939 -3.0021 17 1 -1.1740 -8.5496 -2.0675 18 8 -2.1982 -8.2362 -3.8820 19 6 -2.9290 -9.4277 -3.5846 20 6 -4.0587 -9.5832 -4.5697 21 6 -5.2978 -9.0368 -4.2924 22 6 -6.3326 -9.1750 -5.1984 23 6 -6.1315 -9.8693 -6.3767 24 6 -4.8939 -10.4203 -6.6517 25 6 -3.8576 -10.2773 -5.7481 26 6 0.2768 -8.1149 -3.6851 27 7 1.6705 -1.9994 -1.5583 28 1 -0.3933 0.4417 -0.7651 29 1 1.7923 -0.5139 0.8900 30 1 1.5879 2.4586 -1.2242 31 1 1.5615 2.4679 1.2085 32 1 3.0832 0.8511 -2.2097 33 1 3.5484 -1.0319 -4.0533 34 1 1.1155 -4.5101 -2.0966 35 1 2.5854 -6.2866 -3.7181 36 1 1.1548 -5.7582 -4.6360 37 1 0.6261 -7.9414 -0.9807 38 1 1.4012 -6.3413 -0.8962 39 1 3.0046 -8.1114 -0.8428 40 1 -1.0986 -6.1108 -1.8402 41 1 -1.0999 -5.8757 -3.6418 42 1 -2.2644 -10.2888 -3.6554 43 1 -3.3335 -9.3632 -2.5745 44 1 -5.4564 -8.4987 -3.3694 45 1 -7.2994 -8.7442 -4.9838 46 1 -6.9413 -9.9810 -7.0826 47 1 -4.7367 -10.9624 -7.5724 48 1 -2.8907 -10.7082 -5.9627 49 1 0.2490 -7.9295 -4.7589 50 1 0.8160 -9.0261 -3.4257 51 1 1.1294 -2.6163 -1.0409 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15111636_6580494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:10:22 Heat of formation + Delta-G solvation = -59.540698 kcal Electronic energy + Delta-G solvation = -33082.887383 eV Core-core repulsion = 28529.569120 eV Total energy + Delta-G solvation = -4553.318264 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -42.51719 -41.53124 -40.26285 -39.83161 -38.18232 -37.89966 -36.83316 -35.36859 -32.80929 -32.23280 -31.82665 -31.49413 -29.57777 -27.75401 -27.13392 -26.80096 -26.32160 -23.53887 -23.51180 -22.66967 -22.29569 -21.51672 -21.13144 -20.18581 -19.46498 -18.63456 -18.35485 -17.98758 -17.67997 -16.95243 -16.83442 -16.67427 -16.56447 -16.41704 -16.19722 -15.93277 -15.82021 -15.27954 -15.21377 -15.15474 -14.91375 -14.58766 -14.34487 -14.30106 -14.07866 -13.96119 -13.92608 -13.84885 -13.64781 -13.49115 -13.36622 -12.96531 -12.77994 -12.37883 -12.24214 -12.00635 -11.93438 -11.83608 -11.78932 -11.58091 -11.21356 -11.06852 -10.86826 -10.50746 -10.15419 -10.06697 -9.84029 -9.77843 -9.24881 -4.99398 0.32015 0.38707 0.48333 1.09609 1.57112 1.59317 1.81288 2.01566 2.14221 2.43457 2.51524 2.82705 3.04740 3.16599 3.28510 3.39435 3.51590 3.52872 3.69948 3.77905 3.84599 3.86650 3.92397 3.97666 4.08024 4.20349 4.22609 4.22841 4.27398 4.27810 4.29827 4.34742 4.41812 4.53021 4.58126 4.64283 4.68896 4.71163 4.86829 4.87556 5.01236 5.02684 5.06788 5.07500 5.10429 5.10925 5.30758 5.52060 5.59600 5.59760 5.63031 5.83800 6.04764 6.17498 6.17714 6.22215 6.43166 6.48274 7.16558 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.061 4.061 3 Si 0.717 3.283 4 C 0.021 3.979 5 C -0.198 4.198 6 C -0.098 4.098 7 C -0.049 4.049 8 C 0.589 3.411 9 O -0.522 6.522 10 N -0.729 5.729 11 C 0.144 3.856 12 C -0.097 4.097 13 C 0.100 3.900 14 O -0.564 6.564 15 C -0.124 4.124 16 C 0.063 3.937 17 H 0.089 0.911 18 O -0.364 6.364 19 C 0.102 3.898 20 C -0.094 4.094 21 C -0.099 4.099 22 C -0.123 4.123 23 C -0.113 4.113 24 C -0.123 4.123 25 C -0.098 4.098 26 C -0.133 4.133 27 N -0.524 5.524 28 H 0.380 0.620 29 H 0.120 0.880 30 H -0.255 1.255 31 H -0.256 1.256 32 H 0.151 0.849 33 H 0.153 0.847 34 H 0.391 0.609 35 H 0.082 0.918 36 H 0.074 0.926 37 H 0.051 0.949 38 H 0.046 0.954 39 H 0.383 0.617 40 H 0.075 0.925 41 H 0.101 0.899 42 H 0.059 0.941 43 H 0.058 0.942 44 H 0.122 0.878 45 H 0.124 0.876 46 H 0.124 0.876 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.097 0.903 50 H 0.080 0.920 51 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.024 -1.206 5.492 5.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.170 4.170 3 Si 0.616 3.384 4 C -0.097 4.097 5 C -0.223 4.223 6 C -0.125 4.125 7 C -0.162 4.162 8 C 0.376 3.624 9 O -0.398 6.398 10 N -0.380 5.380 11 C 0.021 3.979 12 C -0.097 4.097 13 C 0.021 3.979 14 O -0.370 6.370 15 C -0.162 4.162 16 C 0.005 3.995 17 H 0.106 0.894 18 O -0.283 6.283 19 C 0.026 3.974 20 C -0.094 4.094 21 C -0.118 4.118 22 C -0.141 4.141 23 C -0.131 4.131 24 C -0.141 4.141 25 C -0.116 4.116 26 C -0.171 4.171 27 N -0.121 5.121 28 H 0.229 0.771 29 H 0.137 0.863 30 H -0.179 1.179 31 H -0.181 1.181 32 H 0.169 0.831 33 H 0.171 0.829 34 H 0.225 0.775 35 H 0.100 0.900 36 H 0.093 0.907 37 H 0.070 0.930 38 H 0.064 0.936 39 H 0.231 0.769 40 H 0.093 0.907 41 H 0.120 0.880 42 H 0.077 0.923 43 H 0.076 0.924 44 H 0.140 0.860 45 H 0.142 0.858 46 H 0.142 0.858 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.115 0.885 50 H 0.099 0.901 51 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -0.997 -0.720 4.534 4.698 hybrid contribution -1.460 -0.833 0.975 1.943 sum -2.457 -1.552 5.509 6.228 Atomic orbital electron populations 1.86587 1.17624 1.80229 1.49724 1.24907 0.83985 1.11844 0.96279 0.94241 0.91436 0.72147 0.80576 1.21080 1.03801 0.85197 0.99578 1.20712 1.05053 1.00680 0.95805 1.21335 1.00452 0.90511 1.00164 1.20493 1.07837 0.96728 0.91188 1.17028 0.78937 0.81898 0.84497 1.90884 1.43977 1.82857 1.22064 1.45822 1.53477 1.12121 1.26606 1.21239 1.01025 0.80781 0.94885 1.21846 0.94429 0.97558 0.95903 1.21853 0.85198 0.96317 0.94485 1.86490 1.32544 1.81898 1.36049 1.23316 0.92719 0.96722 1.03399 1.23737 0.86035 0.96467 0.93276 0.89353 1.88058 1.43317 1.42422 1.54501 1.21374 0.91541 0.88067 0.96418 1.19573 0.94167 0.99641 0.96027 1.21067 0.92641 0.98433 0.99614 1.21190 0.99159 0.99383 0.94404 1.21261 0.97395 0.97315 0.97138 1.21197 0.93235 1.00098 0.99543 1.21083 0.99082 0.98282 0.93196 1.23497 0.95329 0.97491 1.00761 1.41927 1.39974 1.11178 1.18988 0.77127 0.86254 1.17884 1.18051 0.83127 0.82920 0.77547 0.90001 0.90737 0.93041 0.93617 0.76915 0.90677 0.88026 0.92252 0.92379 0.86009 0.85791 0.85837 0.85742 0.85900 0.88455 0.90091 0.74767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.34 12.88 -35.23 -0.45 -0.12 16 2 C -0.06 0.11 3.08 36.01 0.11 0.22 16 3 Si 0.72 -1.61 30.54 -169.99 -5.19 -6.80 16 4 C 0.02 -0.02 6.47 -81.95 -0.53 -0.55 16 5 C -0.20 0.00 9.32 -39.98 -0.37 -0.37 16 6 C -0.10 -0.19 10.65 -39.12 -0.42 -0.60 16 7 C -0.05 -0.08 7.06 -81.98 -0.58 -0.66 16 8 C 0.59 1.85 7.79 -12.85 -0.10 1.75 16 9 O -0.52 -3.77 16.88 5.20 0.09 -3.68 16 10 N -0.73 0.00 5.29 -61.61 -0.33 -0.33 16 11 C 0.14 0.10 4.90 -4.04 -0.02 0.08 16 12 C -0.10 0.15 0.63 -153.70 -0.10 0.05 16 13 C 0.10 -0.26 6.17 37.16 0.23 -0.03 16 14 O -0.56 0.61 13.16 -35.23 -0.46 0.15 16 15 C -0.12 0.23 6.86 -25.92 -0.18 0.05 16 16 C 0.06 -0.07 3.96 -25.78 -0.10 -0.17 16 17 H 0.09 -0.22 7.33 -51.93 -0.38 -0.61 16 18 O -0.36 -0.50 10.34 -35.23 -0.36 -0.86 16 19 C 0.10 0.01 5.90 36.00 0.21 0.22 16 20 C -0.09 -0.14 5.51 -104.63 -0.58 -0.72 16 21 C -0.10 -0.12 9.70 -39.58 -0.38 -0.51 16 22 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 23 C -0.11 -0.10 10.05 -39.58 -0.40 -0.50 16 24 C -0.12 -0.13 10.05 -39.59 -0.40 -0.53 16 25 C -0.10 -0.13 9.70 -39.58 -0.38 -0.52 16 26 C -0.13 0.09 7.05 -25.78 -0.18 -0.10 16 27 N -0.52 0.45 5.99 -5.70 -0.03 0.42 16 28 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 29 H 0.12 -0.35 7.96 -51.93 -0.41 -0.76 16 30 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 31 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 32 H 0.15 -0.29 6.17 -52.48 -0.32 -0.62 16 33 H 0.15 0.27 8.06 -52.48 -0.42 -0.16 16 34 H 0.39 -1.05 6.86 -40.82 -0.28 -1.33 16 35 H 0.08 0.22 7.80 -51.93 -0.40 -0.18 16 36 H 0.07 0.14 8.07 -51.92 -0.42 -0.28 16 37 H 0.05 -0.19 7.30 -51.93 -0.38 -0.57 16 38 H 0.05 -0.17 7.45 -51.92 -0.39 -0.56 16 39 H 0.38 -1.88 9.12 45.56 0.42 -1.46 16 40 H 0.07 -0.25 8.10 -51.93 -0.42 -0.67 16 41 H 0.10 -0.04 8.10 -51.93 -0.42 -0.47 16 42 H 0.06 -0.05 8.09 -51.93 -0.42 -0.47 16 43 H 0.06 -0.07 8.08 -51.93 -0.42 -0.49 16 44 H 0.12 -0.03 8.06 -52.48 -0.42 -0.46 16 45 H 0.12 -0.10 8.06 -52.49 -0.42 -0.53 16 46 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 47 H 0.12 -0.09 8.06 -52.48 -0.42 -0.51 16 48 H 0.12 0.00 8.06 -52.48 -0.42 -0.42 16 49 H 0.10 0.03 8.05 -51.93 -0.42 -0.38 16 50 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 51 H 0.42 -1.32 8.19 -40.82 -0.33 -1.65 16 LS Contribution 425.99 15.07 6.42 6.42 Total: 0.00 -10.25 425.99 -11.65 -21.90 By element: Atomic # 1 Polarization: -6.96 SS G_CDS: -6.76 Total: -13.72 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -4.56 Total: -3.39 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.36 Total: 0.09 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -1.19 Total: -4.50 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.19 Total: -6.80 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -10.25 -11.65 -21.90 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15111636_6580494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.637 kcal (2) G-P(sol) polarization free energy of solvation -10.253 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.651 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.904 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.541 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds