Wall clock time and date at job start Sun Mar 7 2021 03:38:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86307 * 109.47004 * 2 1 4 4 C 1.50697 * 109.47116 * 119.99527 * 2 1 3 5 5 C 1.34227 * 126.50489 * 254.97686 * 4 2 1 6 6 N 1.36840 * 109.93980 * 179.97438 * 5 4 2 7 7 C 1.46499 * 125.06350 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47014 * 265.10820 * 7 6 5 9 9 O 1.21280 * 119.99996 * 0.02562 * 8 7 6 10 10 N 1.34780 * 119.99965 * 180.02562 * 8 7 6 11 11 C 1.46502 * 119.99766 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.85384 * 23.80201 * 11 10 8 13 13 C 1.53778 * 113.61083 * 154.99824 * 11 10 8 14 14 C 1.53786 * 87.07906 * 139.97699 * 13 11 10 15 15 H 1.09002 * 113.61420 * 219.93164 * 14 13 11 16 16 N 1.46507 * 113.61256 * 89.11476 * 14 13 11 17 17 C 1.34940 * 126.03612 * 274.72056 * 16 14 13 18 18 C 1.35318 * 107.74447 * 179.83844 * 17 16 14 19 19 C 1.39872 * 107.92141 * 0.42190 * 18 17 16 20 20 N 1.30839 * 108.19844 * 359.73613 * 19 18 17 21 21 C 1.53775 * 113.61266 * 252.49655 * 11 10 8 22 22 C 1.37691 * 109.87102 * 0.09750 * 6 5 4 23 23 C 1.39083 * 133.50812 * 179.97438 * 22 6 5 24 24 C 1.37788 * 119.77702 * 179.97438 * 23 22 6 25 25 C 1.38787 * 120.66706 * 359.97438 * 24 23 22 26 26 C 1.36665 * 120.52924 * 0.02562 * 25 24 23 27 27 C 1.39592 * 119.76143 * 359.97438 * 26 25 24 28 28 H 0.96700 * 113.99900 * 59.99939 * 1 2 3 29 29 H 1.08997 * 109.47516 * 240.00221 * 2 1 3 30 30 H 1.48498 * 109.99903 * 298.68073 * 3 2 1 31 31 H 1.48499 * 109.99946 * 59.99630 * 3 2 1 32 32 H 1.08000 * 125.03079 * 0.02562 * 5 4 2 33 33 H 1.09004 * 109.47121 * 25.10256 * 7 6 5 34 34 H 1.08996 * 109.47396 * 145.10825 * 7 6 5 35 35 H 0.96997 * 119.99920 * 359.97438 * 10 8 7 36 36 H 1.08998 * 113.61814 * 254.52613 * 13 11 10 37 37 H 1.09007 * 113.61835 * 25.43272 * 13 11 10 38 38 H 1.07997 * 126.13078 * 359.97438 * 17 16 14 39 39 H 1.08002 * 126.04026 * 180.15437 * 18 17 16 40 40 H 1.07995 * 125.90044 * 179.76125 * 19 18 17 41 41 H 1.09006 * 113.61280 * 334.56756 * 21 11 10 42 42 H 1.08999 * 113.62173 * 105.47151 * 21 11 10 43 43 H 1.07998 * 120.11745 * 359.92516 * 23 22 6 44 44 H 1.08002 * 119.66842 * 180.02562 * 24 23 22 45 45 H 1.08001 * 119.73748 * 180.02562 * 25 24 23 46 46 H 1.07997 * 120.12319 * 179.70920 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.4612 -0.1376 2.3227 6 7 2.8025 -1.0989 3.2347 7 6 3.4070 -0.8403 4.5439 8 6 4.9055 -0.9607 4.4380 9 8 5.4180 -1.2350 3.3736 10 7 5.6760 -0.7635 5.5261 11 6 7.1327 -0.8800 5.4229 12 1 7.4998 -0.7165 4.4097 13 6 7.8921 -0.0749 6.4905 14 6 8.8561 -1.2688 6.5923 15 1 9.1648 -1.4950 7.6129 16 7 9.9840 -1.1935 5.6603 17 6 9.9818 -1.6082 4.3762 18 6 11.2085 -1.3615 3.8610 19 6 11.9900 -0.7848 4.8675 20 7 11.2569 -0.6836 5.9465 21 6 7.6980 -2.1459 6.0880 22 6 2.4947 -2.3457 2.7380 23 6 2.6301 -3.6361 3.2388 24 6 2.2171 -4.7108 2.4817 25 6 1.6658 -4.5194 1.2225 26 6 1.5234 -3.2601 0.7110 27 6 1.9352 -2.1570 1.4609 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 -0.8900 30 1 1.5879 2.4586 -1.2242 31 1 1.5614 2.4680 1.2084 32 1 2.5972 0.9248 2.4616 33 1 3.1457 0.1657 4.8724 34 1 3.0343 -1.5666 5.2661 35 1 5.2661 -0.5437 6.3772 36 1 8.3587 0.8313 6.1043 37 1 7.3151 0.0990 7.3989 38 1 9.1495 -2.0549 3.8527 39 1 11.5290 -1.5763 2.8523 40 1 13.0204 -0.4761 4.7707 41 1 7.0679 -2.5383 6.8863 42 1 8.0078 -2.9117 5.3770 43 1 3.0583 -3.7955 4.2174 44 1 2.3227 -5.7121 2.8724 45 1 1.3467 -5.3725 0.6421 46 1 1.0979 -3.1191 -0.2715 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15494482_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:38:46 Heat of formation + Delta-G solvation = 127.239311 kcal Electronic energy + Delta-G solvation = -30476.477478 eV Core-core repulsion = 26336.856504 eV Total energy + Delta-G solvation = -4139.620974 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.59088 -42.38485 -40.94971 -39.39281 -37.98209 -37.60031 -35.05809 -34.12692 -32.01299 -31.29993 -30.94817 -30.17294 -29.07226 -27.20981 -26.41783 -25.34405 -23.66185 -22.87460 -22.45550 -21.94001 -21.68088 -20.57428 -20.41981 -18.66043 -18.48347 -18.33664 -18.01233 -17.68028 -17.38706 -16.55052 -16.33514 -16.01481 -15.74668 -15.69587 -15.55490 -15.26756 -14.86937 -14.78248 -14.64010 -14.45129 -14.27235 -14.05980 -14.01096 -13.72553 -13.49773 -13.44195 -13.38576 -13.34502 -12.66904 -12.46727 -12.38788 -12.27909 -11.99125 -11.96755 -11.61463 -11.57686 -11.15987 -10.42565 -10.37443 -10.33706 -10.27902 -9.51850 -9.02250 -8.53273 -4.89789 0.27708 0.78639 0.93672 1.28869 1.35405 1.40259 1.41940 1.61192 1.64524 1.97335 1.97696 2.06102 2.86115 3.08856 3.09998 3.29309 3.41600 3.45726 3.64899 3.66212 3.70618 3.79394 3.83835 3.86518 3.99243 4.07191 4.14860 4.22639 4.31250 4.34953 4.37555 4.45636 4.46716 4.58345 4.67623 4.69520 4.74522 4.79169 4.89078 4.90238 4.99118 5.13580 5.15120 5.25057 5.64150 5.74743 5.79997 5.85165 5.89428 6.05690 6.08854 6.27701 6.35834 6.60184 6.78968 6.90278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.037 4.037 3 Si 0.678 3.322 4 C -0.149 4.149 5 C 0.071 3.929 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.493 3.507 9 O -0.509 6.509 10 N -0.719 5.719 11 C 0.123 3.877 12 H 0.120 0.880 13 C -0.154 4.154 14 C 0.140 3.860 15 H 0.118 0.882 16 N -0.361 5.361 17 C 0.053 3.947 18 C -0.270 4.270 19 C 0.047 3.953 20 N -0.294 5.294 21 C -0.157 4.157 22 C 0.109 3.891 23 C -0.127 4.127 24 C -0.097 4.097 25 C -0.146 4.146 26 C -0.065 4.065 27 C -0.086 4.086 28 H 0.375 0.625 29 H 0.072 0.928 30 H -0.259 1.259 31 H -0.255 1.255 32 H 0.169 0.831 33 H 0.123 0.877 34 H 0.119 0.881 35 H 0.404 0.596 36 H 0.086 0.914 37 H 0.108 0.892 38 H 0.173 0.827 39 H 0.149 0.851 40 H 0.185 0.815 41 H 0.111 0.889 42 H 0.086 0.914 43 H 0.115 0.885 44 H 0.125 0.875 45 H 0.123 0.877 46 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.127 0.676 3.182 3.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.147 4.147 3 Si 0.579 3.421 4 C -0.157 4.157 5 C -0.054 4.054 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.277 3.723 9 O -0.383 6.383 10 N -0.372 5.372 11 C 0.018 3.982 12 H 0.138 0.862 13 C -0.193 4.193 14 C 0.036 3.964 15 H 0.136 0.864 16 N -0.143 5.143 17 C -0.093 4.093 18 C -0.299 4.299 19 C -0.139 4.139 20 N -0.114 5.114 21 C -0.196 4.196 22 C 0.005 3.995 23 C -0.148 4.148 24 C -0.116 4.116 25 C -0.165 4.165 26 C -0.083 4.083 27 C -0.090 4.090 28 H 0.223 0.777 29 H 0.090 0.910 30 H -0.184 1.184 31 H -0.180 1.180 32 H 0.186 0.814 33 H 0.141 0.859 34 H 0.137 0.863 35 H 0.239 0.761 36 H 0.105 0.895 37 H 0.126 0.874 38 H 0.190 0.810 39 H 0.167 0.833 40 H 0.202 0.798 41 H 0.129 0.871 42 H 0.105 0.895 43 H 0.133 0.867 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 0.102 1.468 4.539 4.772 hybrid contribution -1.143 -0.302 -0.872 1.469 sum -1.041 1.165 3.667 3.986 Atomic orbital electron populations 1.86641 1.18318 1.79999 1.49395 1.24009 0.83802 1.09774 0.97158 0.95102 0.91801 0.74661 0.80532 1.19418 1.08495 0.91606 0.96133 1.21504 1.01062 0.93927 0.88884 1.43170 1.52783 1.04669 1.14365 1.21589 0.90578 1.05953 0.85329 1.21094 0.89600 0.77169 0.84439 1.90812 1.74549 1.45242 1.27672 1.45903 1.06592 1.72477 1.12189 1.22676 0.79242 0.95465 1.00851 0.86234 1.23832 0.96957 0.98496 0.99980 1.21805 0.83075 0.97860 0.93642 0.86444 1.48354 1.09427 1.47745 1.08784 1.22563 1.00164 1.00639 0.85902 1.21585 0.94051 1.12286 1.02027 1.23982 1.00298 0.98961 0.90682 1.77401 0.89521 1.20776 1.23730 1.23941 0.95677 0.97989 1.02032 1.18145 1.01325 0.85838 0.94192 1.19937 1.05061 0.89203 1.00581 1.20818 0.98387 0.97923 0.94486 1.20662 1.02453 0.96889 0.96458 1.20276 0.97984 0.90937 0.99127 1.18944 1.03292 0.92757 0.94002 0.77728 0.90983 1.18380 1.17961 0.81417 0.85911 0.86326 0.76074 0.89493 0.87419 0.81018 0.83281 0.79797 0.87070 0.89525 0.86747 0.85723 0.85925 0.86076 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.33 12.86 -35.23 -0.45 -1.78 16 2 C -0.04 -0.06 3.05 36.00 0.11 0.05 16 3 Si 0.68 -0.08 30.79 -169.99 -5.23 -5.31 16 4 C -0.15 -0.49 5.61 -102.71 -0.58 -1.07 16 5 C 0.07 0.13 9.89 -16.73 -0.17 -0.04 16 6 N -0.47 -0.67 2.27 -115.71 -0.26 -0.93 16 7 C 0.09 -0.26 6.48 -5.19 -0.03 -0.29 16 8 C 0.49 -0.51 7.90 -10.98 -0.09 -0.60 16 9 O -0.51 -1.92 16.02 5.56 0.09 -1.83 16 10 N -0.72 2.86 5.35 -53.02 -0.28 2.58 16 11 C 0.12 -0.33 3.82 -67.12 -0.26 -0.59 16 12 H 0.12 -0.03 6.32 -51.93 -0.33 -0.35 16 13 C -0.15 0.52 7.63 -25.92 -0.20 0.32 16 14 C 0.14 -0.26 5.18 -67.11 -0.35 -0.61 16 15 H 0.12 -0.27 8.14 -51.93 -0.42 -0.70 16 16 N -0.36 -0.46 3.79 -54.07 -0.21 -0.67 16 17 C 0.05 0.04 9.62 -17.23 -0.17 -0.12 16 18 C -0.27 -0.35 10.80 -40.01 -0.43 -0.78 16 19 C 0.05 0.09 12.03 -17.36 -0.21 -0.12 16 20 N -0.29 -1.04 12.58 30.62 0.39 -0.66 16 21 C -0.16 0.52 7.12 -25.92 -0.18 0.34 16 22 C 0.11 0.38 6.80 -83.99 -0.57 -0.19 16 23 C -0.13 -0.29 10.00 -39.43 -0.39 -0.69 16 24 C -0.10 -0.19 10.01 -39.54 -0.40 -0.59 16 25 C -0.15 -0.36 9.97 -39.95 -0.40 -0.76 16 26 C -0.06 -0.23 10.05 -39.65 -0.40 -0.63 16 27 C -0.09 -0.39 6.35 -105.14 -0.67 -1.05 16 28 H 0.38 -0.64 8.74 45.56 0.40 -0.24 16 29 H 0.07 0.04 7.96 -51.93 -0.41 -0.38 16 30 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 31 H -0.25 -0.50 7.04 56.52 0.40 -0.10 16 32 H 0.17 -0.13 6.30 -52.49 -0.33 -0.46 16 33 H 0.12 -0.71 8.12 -51.93 -0.42 -1.13 16 34 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 35 H 0.40 -2.90 8.73 -40.82 -0.36 -3.26 16 36 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.11 -0.61 8.12 -51.92 -0.42 -1.03 16 38 H 0.17 -0.17 6.67 -52.49 -0.35 -0.52 16 39 H 0.15 -0.07 8.06 -52.49 -0.42 -0.49 16 40 H 0.19 -0.16 8.06 -52.49 -0.42 -0.58 16 41 H 0.11 -0.56 8.14 -51.93 -0.42 -0.98 16 42 H 0.09 -0.19 6.96 -51.93 -0.36 -0.55 16 43 H 0.11 0.02 8.06 -52.49 -0.42 -0.41 16 44 H 0.12 -0.03 8.06 -52.49 -0.42 -0.46 16 45 H 0.12 0.06 8.06 -52.49 -0.42 -0.37 16 46 H 0.12 0.29 8.06 -52.49 -0.42 -0.13 16 LS Contribution 388.97 15.07 5.86 5.86 Total: 0.00 -12.41 388.97 -11.49 -23.90 By element: Atomic # 1 Polarization: -7.74 SS G_CDS: -6.01 Total: -13.76 kcal Atomic # 6 Polarization: -2.04 SS G_CDS: -5.37 Total: -7.41 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.37 Total: 0.32 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.36 Total: -3.61 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: -5.23 Total: -5.31 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -12.41 -11.49 -23.90 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15494482_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 151.142 kcal (2) G-P(sol) polarization free energy of solvation -12.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 138.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.903 kcal (6) G-S(sol) free energy of system = (1) + (5) 127.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds