Wall clock time and date at job start Sun Mar 7 2021 03:40:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86294 * 109.47217 * 2 1 4 4 C 1.50698 * 109.47396 * 239.99572 * 2 1 3 5 5 C 1.34235 * 126.49887 * 105.26964 * 4 2 1 6 6 N 1.36836 * 109.93787 * 180.21023 * 5 4 2 7 7 C 1.46495 * 125.06641 * 179.81862 * 6 5 4 8 8 C 1.50703 * 109.46948 * 264.69565 * 7 6 5 9 9 O 1.21278 * 120.00183 * 0.02562 * 8 7 6 10 10 N 1.34783 * 119.99755 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99531 * 180.02562 * 10 8 7 12 12 H 1.08996 * 112.85385 * 23.80181 * 11 10 8 13 13 C 1.53781 * 113.61225 * 155.00207 * 11 10 8 14 14 C 1.53786 * 87.17350 * 139.93836 * 13 11 10 15 15 H 1.09000 * 113.61138 * 220.06261 * 14 13 11 16 16 N 1.46496 * 113.61518 * 89.15486 * 14 13 11 17 17 C 1.34427 * 126.82694 * 275.00301 * 16 14 13 18 18 N 1.30830 * 108.07554 * 179.97438 * 17 16 14 19 19 C 1.33240 * 109.83337 * 0.02562 * 18 17 16 20 20 N 1.30715 * 108.94268 * 359.75005 * 19 18 17 21 21 C 1.53782 * 113.61191 * 252.49880 * 11 10 8 22 22 C 1.37691 * 109.87220 * 359.55013 * 6 5 4 23 23 C 1.39087 * 133.51291 * 180.28650 * 22 6 5 24 24 C 1.37795 * 119.77676 * 179.97438 * 23 22 6 25 25 C 1.38786 * 120.66855 * 359.97438 * 24 23 22 26 26 C 1.36663 * 120.52591 * 0.03596 * 25 24 23 27 27 C 1.39593 * 119.76591 * 359.95882 * 26 25 24 28 28 H 0.96696 * 113.99664 * 60.00044 * 1 2 3 29 29 H 1.09006 * 109.47022 * 119.99884 * 2 1 3 30 30 H 1.48502 * 109.99829 * 298.67804 * 3 2 1 31 31 H 1.48497 * 110.00305 * 59.99655 * 3 2 1 32 32 H 1.07999 * 125.03201 * 0.04548 * 5 4 2 33 33 H 1.08994 * 109.47717 * 144.69104 * 7 6 5 34 34 H 1.09007 * 109.46949 * 24.69029 * 7 6 5 35 35 H 0.96997 * 119.99692 * 0.02562 * 10 8 7 36 36 H 1.09002 * 113.61445 * 254.52836 * 13 11 10 37 37 H 1.09002 * 113.61408 * 25.34566 * 13 11 10 38 38 H 1.08000 * 125.95491 * 359.97438 * 17 16 14 39 39 H 1.07997 * 125.52608 * 180.02562 * 19 18 17 40 40 H 1.08997 * 113.61668 * 334.56642 * 21 11 10 41 41 H 1.08998 * 113.61674 * 105.39151 * 21 11 10 42 42 H 1.07995 * 120.11387 * 359.95810 * 23 22 6 43 43 H 1.08000 * 119.66454 * 179.97438 * 24 23 22 44 44 H 1.07998 * 119.73853 * 180.02562 * 25 24 23 45 45 H 1.07997 * 120.11762 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.4656 -0.1381 -2.3208 6 7 2.8017 -1.0991 -3.2351 7 6 3.4056 -0.8405 -4.5444 8 6 2.3253 -0.7842 -5.5936 9 8 1.1651 -0.9438 -5.2785 10 7 2.6484 -0.5554 -6.8820 11 6 1.5981 -0.5001 -7.9018 12 1 0.6215 -0.2454 -7.4902 13 6 1.9820 0.3315 -9.1370 14 6 1.2884 -0.7479 -9.9849 15 1 1.8203 -0.9887 -10.9053 16 7 -0.1390 -0.4979 -10.1997 17 6 -1.1483 -0.8327 -9.3773 18 7 -2.2678 -0.4363 -9.9263 19 6 -2.0147 0.1524 -11.0945 20 7 -0.7244 0.1435 -11.3035 21 6 1.5765 -1.7254 -8.8308 22 6 2.4932 -2.3457 -2.7386 23 6 2.6284 -3.6363 -3.2393 24 6 2.2156 -4.7109 -2.4820 25 6 1.6656 -4.5195 -1.2222 26 6 1.5233 -3.2602 -0.7109 27 6 1.9350 -2.1571 -1.4609 28 1 -0.3932 0.4417 -0.7650 29 1 1.7924 -0.5138 0.8900 30 1 1.5880 2.4584 -1.2243 31 1 1.5615 2.4679 1.2084 32 1 2.6065 0.9239 -2.4574 33 1 4.1055 -1.6403 -4.7861 34 1 3.9365 0.1112 -4.5181 35 1 3.5763 -0.4274 -7.1339 36 1 1.4899 1.3032 -9.1794 37 1 3.0573 0.3940 -9.3043 38 1 -1.0518 -1.3403 -8.4290 39 1 -2.7552 0.5731 -11.7587 40 1 2.5408 -2.2264 -8.9153 41 1 0.7578 -2.4150 -8.6252 42 1 3.0552 -3.7956 -4.2185 43 1 2.3210 -5.7122 -2.8728 44 1 1.3474 -5.3726 -0.6413 45 1 1.0949 -3.1189 0.2704 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15494484_9818708.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:40:02 Heat of formation + Delta-G solvation = 138.670043 kcal Electronic energy + Delta-G solvation = -30682.255056 eV Core-core repulsion = 26477.703845 eV Total energy + Delta-G solvation = -4204.551212 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -43.28463 -42.54658 -41.27306 -39.68955 -38.06069 -37.61235 -35.29404 -34.11731 -32.91590 -32.05864 -31.37850 -30.17119 -29.13262 -27.39267 -26.76433 -25.58482 -23.80343 -23.40370 -22.93076 -22.52029 -21.89980 -21.12854 -20.62398 -18.79838 -18.64309 -18.26650 -17.93053 -17.60742 -17.17399 -16.69466 -16.36755 -16.33487 -16.16716 -16.05337 -15.78011 -15.60252 -15.27809 -14.95533 -14.77340 -14.64494 -14.45753 -14.22178 -14.04325 -14.01112 -13.65789 -13.60168 -13.34585 -13.06385 -12.64543 -12.55000 -12.49997 -12.30069 -12.05363 -11.92200 -11.66378 -11.26653 -11.00651 -10.81266 -10.70693 -10.49128 -10.47058 -10.37881 -9.07452 -8.58526 -4.93909 0.22830 0.55999 0.74365 1.10216 1.20337 1.30253 1.37009 1.59826 1.65840 1.94848 1.99385 2.02483 2.68001 2.93148 3.05787 3.15700 3.31332 3.34858 3.41714 3.49917 3.56072 3.67935 3.72621 3.74115 3.81049 3.97414 4.02300 4.03118 4.10339 4.27353 4.31860 4.32494 4.36853 4.46016 4.55259 4.57981 4.67973 4.76273 4.85881 4.95203 5.01808 5.21124 5.23523 5.41491 5.60078 5.73829 5.75978 5.81517 5.85674 5.98779 6.22272 6.30899 6.58644 6.81690 7.07614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.191 4.191 5 C 0.065 3.935 6 N -0.467 5.467 7 C 0.092 3.908 8 C 0.492 3.508 9 O -0.510 6.510 10 N -0.718 5.718 11 C 0.121 3.879 12 H 0.118 0.882 13 C -0.151 4.151 14 C 0.135 3.865 15 H 0.123 0.877 16 N -0.367 5.367 17 C 0.255 3.745 18 N -0.541 5.541 19 C 0.201 3.799 20 N -0.315 5.315 21 C -0.155 4.155 22 C 0.109 3.891 23 C -0.128 4.128 24 C -0.096 4.096 25 C -0.145 4.145 26 C -0.064 4.064 27 C -0.086 4.086 28 H 0.374 0.626 29 H 0.114 0.886 30 H -0.261 1.261 31 H -0.256 1.256 32 H 0.169 0.831 33 H 0.120 0.880 34 H 0.124 0.876 35 H 0.405 0.595 36 H 0.087 0.913 37 H 0.111 0.889 38 H 0.216 0.784 39 H 0.220 0.780 40 H 0.115 0.885 41 H 0.087 0.913 42 H 0.114 0.886 43 H 0.125 0.875 44 H 0.123 0.877 45 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.496 0.165 -2.280 9.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.148 4.148 3 Si 0.583 3.417 4 C -0.199 4.199 5 C -0.060 4.060 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.276 3.724 9 O -0.384 6.384 10 N -0.371 5.371 11 C 0.015 3.985 12 H 0.136 0.864 13 C -0.190 4.190 14 C 0.030 3.970 15 H 0.141 0.859 16 N -0.158 5.158 17 C -0.041 4.041 18 N -0.268 5.268 19 C -0.102 4.102 20 N -0.142 5.142 21 C -0.195 4.195 22 C 0.005 3.995 23 C -0.149 4.149 24 C -0.115 4.115 25 C -0.164 4.164 26 C -0.083 4.083 27 C -0.090 4.090 28 H 0.222 0.778 29 H 0.132 0.868 30 H -0.186 1.186 31 H -0.181 1.181 32 H 0.186 0.814 33 H 0.138 0.862 34 H 0.142 0.858 35 H 0.241 0.759 36 H 0.105 0.895 37 H 0.130 0.870 38 H 0.232 0.768 39 H 0.236 0.764 40 H 0.134 0.866 41 H 0.106 0.894 42 H 0.132 0.868 43 H 0.143 0.857 44 H 0.141 0.859 45 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 8.735 0.927 -2.250 9.068 hybrid contribution -0.523 -0.193 -0.787 0.965 sum 8.212 0.734 -3.038 8.787 Atomic orbital electron populations 1.86598 1.18035 1.79922 1.49048 1.24293 0.83431 1.09750 0.97302 0.95374 0.91403 0.74516 0.80384 1.20595 1.09191 0.92366 0.97738 1.21582 1.01233 0.93940 0.89203 1.43177 1.54090 1.04676 1.13064 1.21582 0.94419 1.06143 0.81292 1.21148 0.90953 0.76741 0.83523 1.90822 1.19967 1.46832 1.80750 1.45871 1.10618 1.73832 1.06800 1.22671 0.93610 0.95724 0.86465 0.86393 1.23814 1.02486 0.99124 0.93599 1.21976 0.77145 0.97722 1.00152 0.85903 1.50242 1.07124 1.43307 1.15171 1.26074 0.82847 0.97359 0.97854 1.70628 1.27220 1.19064 1.09842 1.26140 0.92358 0.97453 0.94211 1.78102 1.10050 1.18951 1.07109 1.23997 1.04895 0.97447 0.93157 1.18164 1.01451 0.85797 0.94134 1.19936 1.05432 0.89245 1.00288 1.20832 0.98274 0.97956 0.94441 1.20680 1.02365 0.96975 0.96425 1.20321 0.97742 0.90915 0.99300 1.18940 1.03176 0.92770 0.94125 0.77822 0.86802 1.18626 1.18084 0.81445 0.86242 0.85792 0.75945 0.89469 0.87041 0.76765 0.76365 0.86642 0.89395 0.86789 0.85724 0.85896 0.85880 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.61 12.88 -35.23 -0.45 -2.06 16 2 C -0.04 -0.04 3.06 36.00 0.11 0.07 16 3 Si 0.68 -0.49 30.81 -169.99 -5.24 -5.73 16 4 C -0.19 -0.35 5.58 -102.71 -0.57 -0.92 16 5 C 0.07 0.02 9.89 -16.73 -0.17 -0.15 16 6 N -0.47 -0.10 2.27 -115.71 -0.26 -0.36 16 7 C 0.09 -0.36 6.48 -5.19 -0.03 -0.39 16 8 C 0.49 -0.84 7.90 -10.98 -0.09 -0.92 16 9 O -0.51 -1.81 16.02 5.56 0.09 -1.72 16 10 N -0.72 3.51 5.35 -53.02 -0.28 3.23 16 11 C 0.12 -0.45 3.83 -67.12 -0.26 -0.70 16 12 H 0.12 -0.13 6.37 -51.93 -0.33 -0.46 16 13 C -0.15 0.68 7.62 -25.92 -0.20 0.48 16 14 C 0.13 -0.42 5.22 -67.02 -0.35 -0.77 16 15 H 0.12 -0.46 8.14 -51.93 -0.42 -0.88 16 16 N -0.37 -0.19 3.81 -55.23 -0.21 -0.40 16 17 C 0.26 0.28 10.83 -90.66 -0.98 -0.70 16 18 N -0.54 -1.94 11.19 -15.83 -0.18 -2.12 16 19 C 0.20 0.50 13.03 -91.81 -1.20 -0.70 16 20 N -0.32 -0.93 12.70 29.29 0.37 -0.56 16 21 C -0.16 0.72 7.14 -25.82 -0.18 0.53 16 22 C 0.11 0.27 6.80 -83.99 -0.57 -0.30 16 23 C -0.13 -0.20 10.00 -39.43 -0.39 -0.60 16 24 C -0.10 -0.14 10.01 -39.54 -0.40 -0.54 16 25 C -0.15 -0.29 9.97 -39.95 -0.40 -0.69 16 26 C -0.06 -0.20 10.05 -39.65 -0.40 -0.60 16 27 C -0.09 -0.30 6.35 -105.14 -0.67 -0.97 16 28 H 0.37 0.25 8.70 45.56 0.40 0.64 16 29 H 0.11 0.06 7.96 -51.93 -0.41 -0.35 16 30 H -0.26 -0.22 7.00 56.52 0.40 0.17 16 31 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 32 H 0.17 -0.39 6.27 -52.49 -0.33 -0.72 16 33 H 0.12 -0.74 8.14 -51.93 -0.42 -1.16 16 34 H 0.12 -0.88 8.12 -51.93 -0.42 -1.30 16 35 H 0.41 -3.34 8.73 -40.82 -0.36 -3.69 16 36 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.11 -0.77 8.12 -51.93 -0.42 -1.19 16 38 H 0.22 -0.34 6.76 -52.49 -0.35 -0.69 16 39 H 0.22 -0.18 8.06 -52.49 -0.42 -0.61 16 40 H 0.12 -0.74 8.14 -51.93 -0.42 -1.16 16 41 H 0.09 -0.32 7.04 -51.93 -0.37 -0.69 16 42 H 0.11 -0.07 8.06 -52.49 -0.42 -0.49 16 43 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 44 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 45 H 0.12 0.27 8.06 -52.49 -0.42 -0.15 16 LS Contribution 383.82 15.07 5.78 5.78 Total: 0.00 -13.65 383.82 -12.73 -26.38 By element: Atomic # 1 Polarization: -8.97 SS G_CDS: -5.60 Total: -14.58 kcal Atomic # 6 Polarization: -1.12 SS G_CDS: -6.74 Total: -7.86 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.56 Total: -0.21 kcal Atomic # 8 Polarization: -3.42 SS G_CDS: -0.36 Total: -3.78 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.24 Total: -5.73 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -13.65 -12.73 -26.38 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15494484_9818708.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 165.046 kcal (2) G-P(sol) polarization free energy of solvation -13.648 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 151.397 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.727 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.376 kcal (6) G-S(sol) free energy of system = (1) + (5) 138.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds