Wall clock time and date at job start Sun Mar 7 2021 05:10:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45191 * 1 3 3 C 1.34712 * 116.99766 * 2 1 4 4 O 1.21473 * 120.00402 * 359.97438 * 3 2 1 5 5 C 1.47728 * 119.99977 * 180.02562 * 3 2 1 6 6 C 1.39616 * 120.15025 * 179.97438 * 5 3 2 7 7 C 1.37964 * 119.84720 * 180.02562 * 6 5 3 8 8 C 1.50700 * 119.92141 * 179.97438 * 7 6 5 9 9 H 1.08998 * 112.85343 * 348.80316 * 8 7 6 10 10 C 1.53779 * 113.61523 * 119.99844 * 8 7 6 11 11 C 1.53779 * 87.08155 * 139.97518 * 10 8 7 12 12 H 1.08998 * 113.61751 * 219.93459 * 11 10 8 13 13 N 1.46504 * 113.60994 * 89.11677 * 11 10 8 14 14 C 1.34776 * 119.99774 * 155.00182 * 13 11 10 15 15 O 1.21701 * 120.00135 * 359.97438 * 14 13 11 16 16 C 1.46684 * 119.99998 * 179.97438 * 14 13 11 17 17 C 1.37874 * 126.23497 * 179.97438 * 16 14 13 18 18 C 1.39827 * 107.08440 * 179.97438 * 17 16 14 19 19 C 1.50706 * 126.06783 * 180.02562 * 18 17 16 20 20 O 1.42895 * 109.46938 * 64.99448 * 19 18 17 21 21 Si 1.86301 * 109.47233 * 184.99793 * 19 18 17 22 22 C 1.35453 * 107.86560 * 0.25948 * 18 17 16 23 23 N 1.35526 * 108.87249 * 359.57244 * 22 18 17 24 24 C 1.53776 * 87.08209 * 334.56993 * 11 10 8 25 25 C 1.38346 * 120.15068 * 0.25237 * 7 6 5 26 26 C 1.38387 * 120.30014 * 359.48723 * 25 7 6 27 27 C 1.37923 * 120.15340 * 0.51444 * 26 25 7 28 28 H 1.08995 * 109.47474 * 60.00772 * 1 2 3 29 29 H 1.09003 * 109.46758 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47560 * 300.00342 * 1 2 3 31 31 H 1.08001 * 120.06989 * 0.04105 * 6 5 3 32 32 H 1.09009 * 113.61460 * 25.43234 * 10 8 7 33 33 H 1.08993 * 113.61549 * 254.52426 * 10 8 7 34 34 H 0.96997 * 120.00047 * 334.99460 * 13 11 10 35 35 H 1.08000 * 126.45388 * 359.97438 * 17 16 14 36 36 H 1.09001 * 109.46953 * 304.99485 * 19 18 17 37 37 H 0.96696 * 114.00485 * 60.00759 * 20 19 18 38 38 H 1.48501 * 110.00188 * 58.67931 * 21 19 18 39 39 H 1.48498 * 109.99815 * 179.97438 * 21 19 18 40 40 H 1.08006 * 125.56113 * 179.73254 * 22 18 17 41 41 H 0.97005 * 125.68024 * 180.16752 * 23 22 18 42 42 H 1.09006 * 113.61772 * 139.98202 * 24 11 10 43 43 H 1.09002 * 113.61317 * 270.87682 * 24 11 10 44 44 H 1.07997 * 119.84488 * 179.74970 * 25 7 6 45 45 H 1.08001 * 119.92212 * 180.25729 * 26 25 7 46 46 H 1.08001 * 120.07405 * 179.76336 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0634 1.2003 0.0000 4 8 1.4019 2.2191 -0.0005 5 6 3.5387 1.2777 -0.0006 6 6 4.1758 2.5200 -0.0011 7 6 5.5539 2.5850 -0.0022 8 6 6.2432 3.9251 -0.0034 9 1 5.5606 4.7521 -0.1983 10 6 7.1524 4.1512 1.2161 11 6 8.1495 4.8139 0.2511 12 1 9.1899 4.5635 0.4582 13 7 7.9337 6.2530 0.0814 14 6 8.9562 7.0485 -0.2906 15 8 10.0588 6.5714 -0.4850 16 6 8.7400 8.4892 -0.4611 17 6 9.6888 9.4170 -0.8351 18 6 9.0532 10.6619 -0.8740 19 6 9.6969 11.9760 -1.2345 20 8 10.1128 11.9435 -2.6012 21 14 8.4695 13.3562 -0.9913 22 6 7.7574 10.4778 -0.5251 23 7 7.5528 9.1612 -0.2774 24 6 7.5185 3.9610 -0.8620 25 6 6.3043 1.4228 -0.0080 26 6 5.6793 0.1881 -0.0021 27 6 4.3024 0.1086 -0.0010 28 1 -0.3634 0.5137 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 3.5910 3.4280 -0.0004 32 1 7.5235 3.2280 1.6613 33 1 6.7339 4.8384 1.9513 34 1 7.0550 6.6333 0.2366 35 1 10.7273 9.2195 -1.0563 36 1 10.5635 12.1436 -0.5949 37 1 9.3915 11.7977 -3.2285 38 1 8.0051 13.3804 0.4190 39 1 9.0924 14.6576 -1.3429 40 1 7.0087 11.2534 -0.4579 41 1 6.7109 8.7597 -0.0109 42 1 7.3954 4.4946 -1.8045 43 1 7.9897 2.9858 -0.9851 44 1 7.3828 1.4794 -0.0129 45 1 6.2711 -0.7153 -0.0024 46 1 3.8160 -0.8557 -0.0003 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15508394_10543058.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:10:55 Heat of formation + Delta-G solvation = -47.090664 kcal Electronic energy + Delta-G solvation = -29907.004521 eV Core-core repulsion = 25537.075228 eV Total energy + Delta-G solvation = -4369.929292 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.145 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.54728 -41.80323 -41.22924 -39.97453 -38.70887 -37.62394 -37.41600 -34.79672 -32.72028 -32.41367 -32.10041 -30.64576 -28.77103 -26.93328 -26.92546 -26.14741 -25.20474 -24.12688 -22.98696 -21.96590 -21.29049 -20.86148 -20.41912 -19.90353 -18.81551 -18.19143 -17.50794 -17.35691 -17.29172 -17.13240 -16.89552 -16.44922 -16.25666 -16.09794 -15.76652 -15.58355 -15.16068 -14.93707 -14.81872 -14.64735 -14.56021 -14.46672 -14.30004 -14.04825 -13.90935 -13.69904 -13.49977 -13.20835 -13.19689 -12.99097 -12.77914 -12.23216 -12.01330 -11.95873 -11.91602 -11.81818 -11.67970 -11.36387 -11.18159 -10.35419 -10.27552 -10.14887 -9.97652 -9.86188 -9.33565 -5.05271 -0.40459 0.19430 0.37596 1.34248 1.47574 1.48069 1.63596 1.65204 1.86662 1.97008 2.02082 2.32792 2.61054 3.23651 3.44321 3.50361 3.59383 3.60714 3.67730 3.73149 3.78883 3.86708 3.94870 3.98016 4.01074 4.11633 4.16031 4.21700 4.28903 4.33283 4.46581 4.51854 4.53975 4.63551 4.65081 4.70328 4.76571 4.82725 4.84815 4.87954 4.94310 5.03757 5.16424 5.18464 5.30798 5.36304 5.45877 5.57292 5.70432 5.77156 6.16693 6.36373 6.69102 6.71374 7.07974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.355 6.355 3 C 0.508 3.492 4 O -0.505 6.505 5 C -0.125 4.125 6 C -0.050 4.050 7 C -0.083 4.083 8 C -0.073 4.073 9 H 0.099 0.901 10 C -0.136 4.136 11 C 0.121 3.879 12 H 0.110 0.890 13 N -0.716 5.716 14 C 0.594 3.406 15 O -0.521 6.521 16 C -0.060 4.060 17 C -0.074 4.074 18 C -0.211 4.211 19 C -0.033 4.033 20 O -0.542 6.542 21 Si 0.686 3.314 22 C 0.036 3.964 23 N -0.535 5.535 24 C -0.144 4.144 25 C -0.079 4.079 26 C -0.128 4.128 27 C -0.064 4.064 28 H 0.065 0.935 29 H 0.105 0.895 30 H 0.065 0.935 31 H 0.136 0.864 32 H 0.101 0.899 33 H 0.078 0.922 34 H 0.395 0.605 35 H 0.150 0.850 36 H 0.111 0.889 37 H 0.377 0.623 38 H -0.257 1.257 39 H -0.256 1.256 40 H 0.176 0.824 41 H 0.418 0.582 42 H 0.077 0.923 43 H 0.098 0.902 44 H 0.132 0.868 45 H 0.135 0.865 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.301 -2.019 0.481 5.693 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.271 6.271 3 C 0.353 3.647 4 O -0.394 6.394 5 C -0.126 4.126 6 C -0.069 4.069 7 C -0.083 4.083 8 C -0.092 4.092 9 H 0.117 0.883 10 C -0.174 4.174 11 C 0.016 3.984 12 H 0.128 0.872 13 N -0.367 5.367 14 C 0.382 3.618 15 O -0.396 6.396 16 C -0.172 4.172 17 C -0.100 4.100 18 C -0.218 4.218 19 C -0.145 4.145 20 O -0.347 6.347 21 Si 0.588 3.412 22 C -0.100 4.100 23 N -0.132 5.132 24 C -0.182 4.182 25 C -0.097 4.097 26 C -0.146 4.146 27 C -0.082 4.082 28 H 0.084 0.916 29 H 0.124 0.876 30 H 0.084 0.916 31 H 0.154 0.846 32 H 0.120 0.880 33 H 0.096 0.904 34 H 0.228 0.772 35 H 0.168 0.832 36 H 0.129 0.871 37 H 0.224 0.776 38 H -0.182 1.182 39 H -0.180 1.180 40 H 0.193 0.807 41 H 0.255 0.745 42 H 0.096 0.904 43 H 0.116 0.884 44 H 0.150 0.850 45 H 0.152 0.848 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -4.447 -1.353 1.089 4.774 hybrid contribution -0.836 -0.375 0.479 1.034 sum -5.283 -1.727 1.569 5.775 Atomic orbital electron populations 1.23340 0.75416 1.04137 1.02849 1.86533 1.23991 1.32444 1.84162 1.21236 0.89163 0.81587 0.72723 1.90849 1.66823 1.36048 1.45680 1.19089 0.89003 0.95055 1.09469 1.21144 0.93944 0.96773 0.95004 1.19600 0.92655 0.95046 1.01026 1.21611 0.95616 0.94333 0.97618 0.88308 1.23455 0.95931 1.01773 0.96207 1.21860 1.00998 0.79185 0.96388 0.87214 1.45542 1.12388 1.07744 1.71022 1.17037 0.84378 0.83944 0.76464 1.90885 1.23707 1.74667 1.50345 1.20378 0.87208 0.92278 1.17348 1.21231 0.99080 0.90321 0.99363 1.19903 0.93829 0.96543 1.11552 1.24372 1.04876 0.99488 0.85745 1.86504 1.38172 1.95354 1.14673 0.95201 0.84497 0.77690 0.83823 1.21878 0.97918 0.85411 1.04814 1.41924 1.10463 1.07479 1.53286 1.23592 0.95190 1.01162 0.98278 1.21354 1.00563 0.91812 0.95990 1.21203 0.94336 0.98209 1.00822 1.21516 0.94038 0.98012 0.94683 0.91615 0.87648 0.91630 0.84601 0.88047 0.90379 0.77153 0.83181 0.87119 0.77576 1.18229 1.18048 0.80672 0.74451 0.90432 0.88361 0.85002 0.84759 0.84326 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.35 -0.57 9.82 -40.52 -0.40 -0.96 16 3 C 0.51 1.44 7.90 34.61 0.27 1.72 16 4 O -0.51 -2.64 16.14 -19.24 -0.31 -2.96 16 5 C -0.13 -0.15 5.87 -104.98 -0.62 -0.77 16 6 C -0.05 -0.01 9.25 -39.17 -0.36 -0.38 16 7 C -0.08 0.11 5.28 -104.68 -0.55 -0.44 16 8 C -0.07 0.21 3.85 -90.96 -0.35 -0.14 16 9 H 0.10 -0.36 8.09 -51.93 -0.42 -0.78 16 10 C -0.14 0.43 7.29 -25.92 -0.19 0.24 16 11 C 0.12 -0.20 4.32 -67.12 -0.29 -0.49 16 12 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 13 N -0.72 1.19 5.26 -54.32 -0.29 0.90 16 14 C 0.59 1.11 7.79 -12.85 -0.10 1.01 16 15 O -0.52 -3.14 16.48 5.19 0.09 -3.05 16 16 C -0.06 -0.05 7.06 -81.98 -0.58 -0.62 16 17 C -0.07 -0.15 10.59 -39.12 -0.41 -0.57 16 18 C -0.21 -0.01 5.43 -105.02 -0.57 -0.58 16 19 C -0.03 0.00 3.02 36.01 0.11 0.11 16 20 O -0.54 -0.46 12.88 -35.23 -0.45 -0.91 16 21 Si 0.69 -1.20 30.60 -169.99 -5.20 -6.40 16 22 C 0.04 -0.09 10.45 -16.91 -0.18 -0.26 16 23 N -0.54 1.46 5.99 -9.39 -0.06 1.41 16 24 C -0.14 0.32 7.25 -25.92 -0.19 0.13 16 25 C -0.08 0.15 8.62 -39.49 -0.34 -0.19 16 26 C -0.13 0.21 10.03 -39.64 -0.40 -0.19 16 27 C -0.06 0.03 9.62 -39.17 -0.38 -0.35 16 28 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 30 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.14 0.01 7.64 -52.49 -0.40 -0.39 16 32 H 0.10 -0.35 7.73 -51.92 -0.40 -0.75 16 33 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 34 H 0.39 -1.79 7.83 -40.82 -0.32 -2.11 16 35 H 0.15 0.47 8.06 -52.49 -0.42 0.05 16 36 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 37 H 0.38 -1.19 8.70 45.56 0.40 -0.80 16 38 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 39 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 40 H 0.18 -0.96 6.21 -52.48 -0.33 -1.29 16 41 H 0.42 -2.54 8.19 -40.82 -0.33 -2.88 16 42 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.10 -0.27 6.29 -51.93 -0.33 -0.60 16 44 H 0.13 -0.48 6.63 -52.49 -0.35 -0.83 16 45 H 0.13 -0.48 8.06 -52.49 -0.42 -0.90 16 46 H 0.14 -0.21 7.61 -52.49 -0.40 -0.61 16 LS Contribution 392.72 15.07 5.92 5.92 Total: 0.00 -11.51 392.72 -10.59 -22.10 By element: Atomic # 1 Polarization: -9.48 SS G_CDS: -5.84 Total: -15.31 kcal Atomic # 6 Polarization: 3.32 SS G_CDS: -4.05 Total: -0.73 kcal Atomic # 7 Polarization: 2.65 SS G_CDS: -0.34 Total: 2.31 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -1.08 Total: -7.88 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.20 Total: -6.40 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -11.51 -10.59 -22.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15508394_10543058.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.992 kcal (2) G-P(sol) polarization free energy of solvation -11.506 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.099 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.091 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds