Wall clock time and date at job start Sun Mar 7 2021 02:51:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45206 * 109.47311 * 2 1 4 4 C 1.34219 * 117.00269 * 179.97438 * 3 2 1 5 5 O 1.20832 * 120.00117 * 0.02562 * 4 3 2 6 6 C 1.50701 * 120.00416 * 180.02562 * 4 3 2 7 7 H 1.09004 * 112.84492 * 311.19587 * 6 4 3 8 8 C 1.53780 * 113.69248 * 82.46324 * 6 4 3 9 9 C 1.53783 * 87.08079 * 139.99477 * 8 6 4 10 10 F 1.39898 * 113.68814 * 89.13031 * 9 8 6 11 11 C 1.52996 * 113.61387 * 220.02041 * 9 8 6 12 12 N 1.46498 * 109.47059 * 277.49720 * 11 9 8 13 13 C 1.34777 * 119.99828 * 179.72339 * 12 11 9 14 14 O 1.21693 * 120.00014 * 0.28042 * 13 12 11 15 15 C 1.46682 * 120.00182 * 180.27909 * 13 12 11 16 16 C 1.37870 * 126.23378 * 179.71906 * 15 13 12 17 17 C 1.50694 * 126.45882 * 359.97438 * 16 15 13 18 18 C 1.39835 * 107.08110 * 179.84361 * 16 15 13 19 19 C 1.35445 * 107.86822 * 0.41752 * 18 16 15 20 20 C 1.50698 * 125.56676 * 179.71617 * 19 18 16 21 21 O 1.42906 * 109.47250 * 300.00165 * 20 19 18 22 22 Si 1.86304 * 109.47461 * 179.97438 * 20 19 18 23 23 N 1.35539 * 108.87278 * 359.74082 * 19 18 16 24 24 C 1.53780 * 113.61773 * 180.02562 * 6 4 3 25 25 H 1.08994 * 109.47187 * 300.00149 * 1 2 3 26 26 H 1.09002 * 109.46998 * 60.00024 * 1 2 3 27 27 H 1.08995 * 109.46921 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.47461 * 240.00262 * 2 1 3 29 29 H 1.09002 * 109.46998 * 119.99976 * 2 1 3 30 30 H 1.09006 * 113.60830 * 25.44713 * 8 6 4 31 31 H 1.08992 * 113.61689 * 254.55160 * 8 6 4 32 32 H 1.09004 * 109.47066 * 157.49988 * 11 9 8 33 33 H 1.08994 * 109.46974 * 37.50135 * 11 9 8 34 34 H 0.97001 * 120.00384 * 0.02562 * 12 11 9 35 35 H 1.09006 * 109.47305 * 90.00123 * 17 16 15 36 36 H 1.09000 * 109.47322 * 209.99914 * 17 16 15 37 37 H 1.09009 * 109.47315 * 330.00407 * 17 16 15 38 38 H 1.08003 * 126.06655 * 180.15094 * 18 16 15 39 39 H 1.08998 * 109.47384 * 60.00039 * 20 19 18 40 40 H 0.96696 * 113.99574 * 299.99574 * 21 20 19 41 41 H 1.48493 * 109.99932 * 180.02562 * 22 20 19 42 42 H 1.48498 * 109.99847 * 301.32567 * 22 20 19 43 43 H 0.96995 * 125.67680 * 179.97438 * 23 19 18 44 44 H 1.09002 * 113.60970 * 105.38403 * 24 6 4 45 45 H 1.08992 * 113.69075 * 334.49945 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0012 7 1 3.4714 3.5816 -0.7547 8 6 3.9858 3.5786 1.3974 9 6 5.3562 4.1437 0.9878 10 9 5.2850 5.3939 0.3641 11 6 6.3979 4.0967 2.1074 12 7 6.2192 5.2526 2.9895 13 6 7.0267 5.4176 4.0559 14 8 7.9075 4.6093 4.2830 15 6 6.8438 6.5717 4.9427 16 6 7.5882 6.8620 6.0662 17 6 8.7382 6.0552 6.6117 18 6 7.0769 8.0479 6.6025 19 6 6.0460 8.4473 5.8200 20 6 5.2049 9.6783 6.0393 21 8 4.5620 9.5954 7.3129 22 14 3.9162 9.7969 4.6991 23 7 5.8940 7.5588 4.8078 24 6 5.4582 2.9681 0.0011 25 1 -0.3633 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 1.8934 -0.5138 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 4.0376 2.8529 2.2091 31 1 3.2287 4.3453 1.5615 32 1 7.3980 4.1213 1.6744 33 1 6.2730 3.1786 2.6815 34 1 5.5169 5.8967 2.8087 35 1 9.6704 6.4056 6.1685 36 1 8.7837 6.1733 7.6943 37 1 8.5924 5.0031 6.3667 38 1 7.4371 8.5532 7.4865 39 1 5.8410 10.5630 6.0104 40 1 3.9787 8.8303 7.4099 41 1 3.0805 11.0071 4.9037 42 1 4.5717 9.8519 3.3677 43 1 5.2268 7.6099 4.1057 44 1 5.8894 3.2422 -0.9618 45 1 5.9141 2.0760 0.4303 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15509216_13940406.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:51:01 Heat of formation + Delta-G solvation = -131.062263 kcal Electronic energy + Delta-G solvation = -29698.477558 eV Core-core repulsion = 25212.819951 eV Total energy + Delta-G solvation = -4485.657607 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.152 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -49.09293 -42.61368 -41.83340 -40.30423 -39.27258 -37.81957 -37.49951 -35.83967 -33.60816 -32.80910 -31.73611 -29.98972 -28.29137 -27.43183 -27.13792 -25.90674 -23.93086 -22.52246 -22.13048 -21.60699 -20.94216 -20.39058 -19.86671 -18.93215 -18.00945 -17.87940 -17.63408 -17.51070 -17.02810 -16.86848 -16.63929 -16.25935 -16.06859 -15.88106 -15.43815 -15.09548 -14.96354 -14.88538 -14.64597 -14.40920 -14.25316 -14.08421 -13.89411 -13.82427 -13.62040 -13.48497 -13.38225 -13.10794 -13.02716 -12.94081 -12.73741 -12.59601 -12.58677 -12.25800 -12.03228 -11.75636 -11.60273 -11.40454 -11.00467 -10.66907 -10.36203 -9.79144 -9.16155 -5.39472 0.31776 0.95313 1.03323 1.27572 1.49556 1.60582 1.68218 1.82851 1.93861 2.33205 2.65333 2.80298 2.98557 3.08373 3.21452 3.24403 3.56052 3.71753 3.76337 3.87723 3.92299 3.97349 4.10498 4.17779 4.21973 4.24862 4.29271 4.31386 4.31926 4.42669 4.52833 4.61968 4.64876 4.73231 4.78018 4.90672 4.94579 4.94977 5.03095 5.11016 5.23513 5.36746 5.46444 5.66310 5.91931 6.16092 6.33103 6.38814 6.63415 7.05679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.355 6.355 4 C 0.473 3.527 5 O -0.501 6.501 6 C -0.109 4.109 7 H 0.134 0.866 8 C -0.136 4.136 9 C 0.081 3.919 10 F -0.181 7.181 11 C 0.116 3.884 12 N -0.733 5.733 13 C 0.593 3.407 14 O -0.518 6.518 15 C -0.054 4.054 16 C -0.066 4.066 17 C -0.093 4.093 18 C -0.172 4.172 19 C 0.016 3.984 20 C -0.037 4.037 21 O -0.531 6.531 22 Si 0.669 3.331 23 N -0.535 5.535 24 C -0.129 4.129 25 H 0.068 0.932 26 H 0.068 0.932 27 H 0.082 0.918 28 H 0.072 0.928 29 H 0.072 0.928 30 H 0.110 0.890 31 H 0.099 0.901 32 H 0.088 0.912 33 H 0.095 0.905 34 H 0.397 0.603 35 H 0.069 0.931 36 H 0.065 0.935 37 H 0.081 0.919 38 H 0.147 0.853 39 H 0.129 0.871 40 H 0.381 0.619 41 H -0.241 1.241 42 H -0.250 1.250 43 H 0.411 0.589 44 H 0.099 0.901 45 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.062 -0.166 -1.066 6.157 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.315 3.685 5 O -0.389 6.389 6 C -0.128 4.128 7 H 0.151 0.849 8 C -0.173 4.173 9 C 0.063 3.937 10 F -0.161 7.161 11 C -0.008 4.008 12 N -0.386 5.386 13 C 0.381 3.619 14 O -0.393 6.393 15 C -0.166 4.166 16 C -0.075 4.075 17 C -0.150 4.150 18 C -0.197 4.197 19 C -0.100 4.100 20 C -0.150 4.150 21 O -0.335 6.335 22 Si 0.569 3.431 23 N -0.136 5.136 24 C -0.166 4.166 25 H 0.087 0.913 26 H 0.087 0.913 27 H 0.101 0.899 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.128 0.872 31 H 0.118 0.882 32 H 0.106 0.894 33 H 0.113 0.887 34 H 0.231 0.769 35 H 0.087 0.913 36 H 0.084 0.916 37 H 0.100 0.900 38 H 0.165 0.835 39 H 0.146 0.854 40 H 0.229 0.771 41 H -0.164 1.164 42 H -0.174 1.174 43 H 0.250 0.750 44 H 0.117 0.883 45 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -5.320 -0.056 -1.631 5.565 hybrid contribution -0.233 0.547 -0.476 0.761 sum -5.553 0.490 -2.107 5.959 Atomic orbital electron populations 1.21825 0.92240 1.03347 1.03687 1.23118 0.95677 0.79648 1.02861 1.86509 1.24147 1.32948 1.83596 1.23288 0.80836 0.91968 0.72376 1.90705 1.60514 1.42765 1.44869 1.22483 0.97192 0.91849 1.01256 0.84859 1.23620 0.96566 1.01143 0.95995 1.22015 0.97067 0.81072 0.93589 1.92901 1.97147 1.42446 1.83593 1.21793 0.99175 0.90161 0.89681 1.45706 1.36622 1.27998 1.28227 1.16988 0.81368 0.83982 0.79530 1.90860 1.32680 1.43709 1.72070 1.20089 0.99083 0.94728 1.02685 1.20046 0.97724 0.96096 0.93589 1.20396 0.94465 1.00092 1.00085 1.20641 0.98403 0.98085 1.02550 1.20874 1.01706 0.95181 0.92264 1.24518 0.99936 0.95370 0.95139 1.86563 1.63500 1.50894 1.32557 0.95545 0.81731 0.89342 0.76475 1.41985 1.27745 1.20178 1.23715 1.23581 0.93697 0.98298 1.01072 0.91331 0.91341 0.89931 0.90995 0.90992 0.87166 0.88238 0.89387 0.88651 0.76907 0.91255 0.91611 0.90020 0.83497 0.85427 0.77118 1.16433 1.17444 0.74992 0.88277 0.86093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.37 10.29 37.16 0.38 0.76 16 2 C 0.06 -0.04 6.19 37.16 0.23 0.19 16 3 O -0.36 -0.16 10.22 -39.23 -0.40 -0.56 16 4 C 0.47 0.26 7.49 36.01 0.27 0.53 16 5 O -0.50 -1.70 15.65 -18.76 -0.29 -1.99 16 6 C -0.11 0.25 4.23 -90.96 -0.39 -0.13 16 7 H 0.13 -0.46 8.14 -51.93 -0.42 -0.88 16 8 C -0.14 0.50 7.08 -25.92 -0.18 0.31 16 9 C 0.08 -0.22 1.67 -89.79 -0.15 -0.37 16 10 F -0.18 0.21 16.80 2.25 0.04 0.24 16 11 C 0.12 -0.19 5.37 -4.04 -0.02 -0.21 16 12 N -0.73 0.85 5.46 -61.62 -0.34 0.51 16 13 C 0.59 1.15 7.79 -12.85 -0.10 1.05 16 14 O -0.52 -2.68 14.80 5.20 0.08 -2.60 16 15 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 16 C -0.07 -0.15 6.21 -104.16 -0.65 -0.80 16 17 C -0.09 -0.19 9.83 36.00 0.35 0.17 16 18 C -0.17 -0.21 10.64 -39.98 -0.43 -0.63 16 19 C 0.02 -0.01 6.12 -81.95 -0.50 -0.51 16 20 C -0.04 0.07 2.98 36.00 0.11 0.17 16 21 O -0.53 0.62 12.87 -35.23 -0.45 0.17 16 22 Si 0.67 -2.11 30.96 -169.99 -5.26 -7.37 16 23 N -0.54 0.71 5.47 -5.70 -0.03 0.68 16 24 C -0.13 0.31 6.86 -25.90 -0.18 0.13 16 25 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 26 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 27 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 28 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 29 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 30 H 0.11 -0.42 7.92 -51.93 -0.41 -0.83 16 31 H 0.10 -0.48 8.14 -51.93 -0.42 -0.91 16 32 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.10 -0.17 7.94 -51.93 -0.41 -0.58 16 34 H 0.40 -1.33 7.31 -40.82 -0.30 -1.63 16 35 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 36 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 37 H 0.08 0.27 6.49 -51.92 -0.34 -0.07 16 38 H 0.15 0.09 8.06 -52.48 -0.42 -0.34 16 39 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 40 H 0.38 -1.88 8.70 45.56 0.40 -1.49 16 41 H -0.24 -0.06 7.11 56.52 0.40 0.34 16 42 H -0.25 0.28 7.11 56.52 0.40 0.68 16 43 H 0.41 -1.67 5.98 -40.82 -0.24 -1.92 16 44 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 45 H 0.12 -0.23 7.40 -51.93 -0.38 -0.62 16 LS Contribution 383.55 15.07 5.78 5.78 Total: 0.00 -9.54 383.55 -9.08 -18.62 By element: Atomic # 1 Polarization: -7.11 SS G_CDS: -6.37 Total: -13.49 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -1.83 Total: 0.01 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -0.37 Total: 1.19 kcal Atomic # 8 Polarization: -3.91 SS G_CDS: -1.07 Total: -4.98 kcal Atomic # 9 Polarization: 0.21 SS G_CDS: 0.04 Total: 0.24 kcal Atomic # 14 Polarization: -2.11 SS G_CDS: -5.26 Total: -7.37 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -9.54 -9.08 -18.62 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15509216_13940406.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.439 kcal (2) G-P(sol) polarization free energy of solvation -9.538 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.085 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.623 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds