Wall clock time and date at job start Sun Mar 7 2021 02:51:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.46884 * 2 1 4 4 C 1.34231 * 116.99983 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00142 * 0.02562 * 4 3 2 6 6 C 1.50698 * 120.00053 * 180.02562 * 4 3 2 7 7 H 1.08997 * 112.85409 * 48.80300 * 6 4 3 8 8 C 1.53778 * 113.61647 * 180.02562 * 6 4 3 9 9 C 1.53784 * 87.08423 * 139.98102 * 8 6 4 10 10 F 1.39898 * 113.61398 * 89.20051 * 9 8 6 11 11 C 1.53007 * 113.61437 * 220.02362 * 9 8 6 12 12 N 1.46492 * 109.46956 * 184.99820 * 11 9 8 13 13 C 1.34782 * 120.00145 * 179.97438 * 12 11 9 14 14 O 1.21277 * 119.99572 * 0.02562 * 13 12 11 15 15 C 1.50697 * 120.00310 * 180.02562 * 13 12 11 16 16 C 1.52999 * 109.47331 * 180.02562 * 15 13 12 17 17 O 1.42903 * 109.47350 * 179.97438 * 16 15 13 18 18 C 1.35895 * 116.99932 * 179.97438 * 17 16 15 19 19 C 1.38708 * 120.05147 * 179.72541 * 18 17 16 20 20 C 1.38172 * 119.94279 * 179.72094 * 19 18 17 21 21 C 1.50697 * 119.97487 * 180.27781 * 20 19 18 22 22 O 1.42908 * 109.46787 * 300.29761 * 21 20 19 23 23 Si 1.86298 * 109.47017 * 180.29943 * 21 20 19 24 24 C 1.38250 * 120.05368 * 0.57421 * 20 19 18 25 25 C 1.38289 * 120.10996 * 359.68126 * 24 20 19 26 26 C 1.38126 * 120.05590 * 0.03914 * 25 24 20 27 27 C 1.53783 * 87.08032 * 334.56783 * 9 8 6 28 28 H 1.09001 * 109.47194 * 299.99482 * 1 2 3 29 29 H 1.08992 * 109.47399 * 59.99654 * 1 2 3 30 30 H 1.09004 * 109.46724 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47398 * 120.00338 * 2 1 3 32 32 H 1.09001 * 109.47194 * 240.00518 * 2 1 3 33 33 H 1.08999 * 113.61704 * 254.52629 * 8 6 4 34 34 H 1.09004 * 113.61294 * 25.43225 * 8 6 4 35 35 H 1.09003 * 109.46857 * 304.99431 * 11 9 8 36 36 H 1.08997 * 109.46991 * 64.99721 * 11 9 8 37 37 H 0.97005 * 120.00143 * 359.97438 * 12 11 9 38 38 H 1.09006 * 109.46998 * 300.00298 * 15 13 12 39 39 H 1.08999 * 109.47191 * 59.99507 * 15 13 12 40 40 H 1.09003 * 109.46857 * 299.99686 * 16 15 13 41 41 H 1.08997 * 109.46782 * 59.99848 * 16 15 13 42 42 H 1.08001 * 120.03177 * 0.02562 * 19 18 17 43 43 H 1.08996 * 109.47473 * 60.29380 * 21 20 19 44 44 H 0.96697 * 113.99793 * 300.00153 * 22 21 20 45 45 H 1.48501 * 110.00044 * 179.97438 * 23 21 20 46 46 H 1.48500 * 110.00237 * 301.31641 * 23 21 20 47 47 H 1.07994 * 119.94356 * 179.69649 * 24 20 19 48 48 H 1.07996 * 119.97460 * 180.02562 * 25 24 20 49 49 H 1.08004 * 120.02588 * 180.02562 * 26 25 24 50 50 H 1.09001 * 113.61357 * 270.88594 * 27 9 8 51 51 H 1.08996 * 113.61413 * 139.98285 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9375 0.0012 7 1 3.4708 3.5813 0.7569 8 6 5.4581 2.9682 0.0011 9 6 5.3563 4.1431 -0.9860 10 9 5.2849 5.3937 -0.3631 11 6 6.3984 4.0953 -2.1052 12 7 6.2979 5.3098 -2.9182 13 6 7.1235 5.4880 -3.9685 14 8 7.9493 4.6426 -4.2408 15 6 7.0205 6.7377 -4.8044 16 6 8.0625 6.6899 -5.9237 17 8 7.9645 7.8746 -6.7168 18 6 8.8265 7.9912 -7.7608 19 6 8.7828 9.1128 -8.5757 20 6 9.6642 9.2318 -9.6331 21 6 9.6216 10.4529 -10.5152 22 8 8.3313 10.5585 -11.1203 23 14 10.9201 10.3056 -11.8429 24 6 10.5812 8.2286 -9.8864 25 6 10.6232 7.1070 -9.0786 26 6 9.7480 6.9860 -8.0168 27 6 3.9861 3.5777 -1.3956 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 1.8934 -0.5139 0.8899 32 1 1.8934 -0.5138 -0.8900 33 1 5.8894 3.2429 0.9637 34 1 5.9127 2.0754 -0.4283 35 1 7.3959 4.0307 -1.6704 36 1 6.2182 3.2223 -2.7325 37 1 5.6371 5.9858 -2.7005 38 1 6.0232 6.8026 -5.2394 39 1 7.2006 7.6105 -4.1768 40 1 9.0600 6.6248 -5.4890 41 1 7.8819 5.8171 -6.5512 42 1 8.0638 9.8948 -8.3809 43 1 9.8150 11.3418 -9.9147 44 1 8.0918 9.8004 -11.6707 45 1 10.8879 11.5035 -12.7199 46 1 12.2634 10.1631 -11.2261 47 1 11.2660 8.3212 -10.7163 48 1 11.3406 6.3249 -9.2781 49 1 9.7815 6.1100 -7.3859 50 1 4.0382 2.8514 -2.2067 51 1 3.2290 4.3443 -1.5605 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15509216_4549614.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:51:34 Heat of formation + Delta-G solvation = -186.563700 kcal Electronic energy + Delta-G solvation = -33561.414702 eV Core-core repulsion = 28536.330332 eV Total energy + Delta-G solvation = -5025.084370 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.172 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -48.95517 -41.85629 -41.40839 -40.79794 -39.29155 -39.07228 -37.57786 -37.26512 -35.75050 -33.42629 -32.70281 -32.45819 -31.02543 -29.84264 -27.21556 -27.06958 -26.51803 -24.96462 -23.75123 -23.66720 -22.13847 -22.03346 -21.49450 -20.66304 -19.43821 -19.04477 -18.30913 -17.88327 -17.74676 -17.67267 -17.56010 -17.31684 -17.10516 -16.89817 -16.78855 -16.32207 -16.12106 -15.95687 -15.75160 -15.41011 -15.26130 -14.90677 -14.69682 -14.65278 -14.55822 -14.40520 -14.20762 -14.14636 -13.85704 -13.67390 -13.49098 -13.22260 -13.00156 -12.93481 -12.91933 -12.84295 -12.60001 -12.50487 -12.38140 -11.99682 -11.93710 -11.82585 -11.62955 -11.59377 -11.56951 -11.41102 -11.11679 -10.50481 -10.29060 -9.92813 -9.27981 -4.97759 0.19239 0.38419 1.00069 1.30378 1.45578 1.53656 1.65009 1.67287 1.97127 2.39458 2.66277 2.84957 2.97039 3.13909 3.25712 3.40033 3.50365 3.54905 3.65973 3.83382 3.84232 3.87680 3.95003 3.95549 4.01894 4.09120 4.16110 4.22793 4.26881 4.28526 4.30164 4.38246 4.46360 4.50245 4.53344 4.56540 4.61630 4.66158 4.73506 4.75327 4.79229 4.81272 4.87869 4.97417 5.09541 5.11749 5.23844 5.25582 5.37370 5.39645 5.43328 5.69679 6.29752 6.35321 6.59958 6.76232 7.04683 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.473 3.527 5 O -0.536 6.536 6 C -0.108 4.108 7 H 0.149 0.851 8 C -0.132 4.132 9 C 0.093 3.907 10 F -0.185 7.185 11 C 0.112 3.888 12 N -0.716 5.716 13 C 0.523 3.477 14 O -0.580 6.580 15 C -0.133 4.133 16 C 0.074 3.926 17 O -0.325 6.325 18 C 0.117 3.883 19 C -0.142 4.142 20 C -0.084 4.084 21 C -0.078 4.078 22 O -0.555 6.555 23 Si 0.785 3.215 24 C -0.158 4.158 25 C -0.075 4.075 26 C -0.211 4.211 27 C -0.127 4.127 28 H 0.068 0.932 29 H 0.069 0.931 30 H 0.095 0.905 31 H 0.067 0.933 32 H 0.069 0.931 33 H 0.102 0.898 34 H 0.113 0.887 35 H 0.077 0.923 36 H 0.093 0.907 37 H 0.419 0.581 38 H 0.129 0.871 39 H 0.125 0.875 40 H 0.064 0.936 41 H 0.068 0.932 42 H 0.127 0.873 43 H 0.107 0.893 44 H 0.396 0.604 45 H -0.298 1.298 46 H -0.284 1.284 47 H 0.148 0.852 48 H 0.153 0.847 49 H 0.137 0.863 50 H 0.111 0.889 51 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.531 -1.631 -0.194 4.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.276 6.276 4 C 0.317 3.683 5 O -0.425 6.425 6 C -0.127 4.127 7 H 0.166 0.834 8 C -0.170 4.170 9 C 0.075 3.925 10 F -0.165 7.165 11 C -0.012 4.012 12 N -0.369 5.369 13 C 0.311 3.689 14 O -0.459 6.459 15 C -0.172 4.172 16 C -0.002 4.002 17 O -0.239 6.239 18 C 0.072 3.928 19 C -0.160 4.160 20 C -0.084 4.084 21 C -0.187 4.187 22 O -0.363 6.363 23 Si 0.691 3.309 24 C -0.175 4.175 25 C -0.093 4.093 26 C -0.230 4.230 27 C -0.164 4.164 28 H 0.087 0.913 29 H 0.089 0.911 30 H 0.114 0.886 31 H 0.086 0.914 32 H 0.088 0.912 33 H 0.121 0.879 34 H 0.131 0.869 35 H 0.095 0.905 36 H 0.111 0.889 37 H 0.257 0.743 38 H 0.147 0.853 39 H 0.143 0.857 40 H 0.082 0.918 41 H 0.087 0.913 42 H 0.145 0.855 43 H 0.124 0.876 44 H 0.246 0.754 45 H -0.226 1.226 46 H -0.211 1.211 47 H 0.165 0.835 48 H 0.171 0.829 49 H 0.155 0.845 50 H 0.130 0.870 51 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -3.234 -1.492 -0.307 3.574 hybrid contribution -0.287 0.097 1.195 1.233 sum -3.520 -1.394 0.888 3.889 Atomic orbital electron populations 1.21829 0.90736 1.04257 1.03772 1.23265 0.96905 0.79268 1.02549 1.86525 1.24183 1.33541 1.83338 1.23846 0.80604 0.92680 0.71150 1.90683 1.61124 1.44094 1.46610 1.22616 0.97017 0.90418 1.02632 0.83379 1.23597 0.93721 0.98227 1.01406 1.21845 0.97179 0.80548 0.92976 1.92892 1.97174 1.42758 1.83712 1.21795 0.99158 0.88968 0.91264 1.45709 1.38412 1.22973 1.29791 1.20584 0.79890 0.87848 0.80610 1.90750 1.37734 1.46485 1.70977 1.21429 1.02574 0.96781 0.96463 1.22445 0.99959 0.85755 0.92003 1.85952 1.55374 1.42636 1.39908 1.19137 0.90401 0.95014 0.88245 1.20314 1.02214 0.97589 0.95933 1.20244 0.95633 0.96676 0.95891 1.25297 0.94969 0.96985 1.01482 1.86468 1.33665 1.48249 1.67923 0.93534 0.74128 0.84570 0.78677 1.21178 1.00255 0.94395 1.01688 1.21252 0.97305 0.97829 0.92895 1.21556 0.99145 1.00150 1.02154 1.23630 0.96429 1.01231 0.95116 0.91291 0.91146 0.88619 0.91437 0.91246 0.87898 0.86890 0.90519 0.88901 0.74347 0.85285 0.85731 0.91755 0.91350 0.85506 0.87595 0.75434 1.22643 1.21119 0.83473 0.82932 0.84514 0.87029 0.86617 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.70 10.29 71.98 0.74 1.44 16 2 C 0.05 -0.02 6.19 71.98 0.45 0.42 16 3 O -0.36 -0.59 10.22 -51.42 -0.53 -1.12 16 4 C 0.47 0.94 7.48 71.24 0.53 1.48 16 5 O -0.54 -4.41 15.65 21.98 0.34 -4.07 16 6 C -0.11 0.48 4.24 -11.01 -0.05 0.44 16 7 H 0.15 -1.08 8.14 -2.39 -0.02 -1.10 16 8 C -0.13 0.58 6.86 31.12 0.21 0.79 16 9 C 0.09 -0.54 1.74 -10.26 -0.02 -0.55 16 10 F -0.19 0.60 16.58 44.97 0.75 1.34 16 11 C 0.11 -0.40 5.42 86.38 0.47 0.06 16 12 N -0.72 3.16 5.45 -463.07 -2.52 0.64 16 13 C 0.52 0.07 7.83 87.66 0.69 0.76 16 14 O -0.58 -5.07 15.98 -3.02 -0.05 -5.12 16 15 C -0.13 0.55 6.07 29.85 0.18 0.73 16 16 C 0.07 0.08 4.03 71.98 0.29 0.37 16 17 O -0.32 -1.48 10.14 -92.37 -0.94 -2.42 16 18 C 0.12 0.63 6.69 22.50 0.15 0.78 16 19 C -0.14 -0.73 9.55 22.37 0.21 -0.52 16 20 C -0.08 -0.18 5.39 -19.88 -0.11 -0.29 16 21 C -0.08 -0.06 2.82 71.24 0.20 0.14 16 22 O -0.56 -0.81 12.76 -148.98 -1.90 -2.71 16 23 Si 0.79 -1.46 29.79 68.60 2.04 0.58 16 24 C -0.16 0.03 8.67 22.28 0.19 0.22 16 25 C -0.07 -0.02 10.04 22.26 0.22 0.21 16 26 C -0.21 -0.64 9.04 22.37 0.20 -0.43 16 27 C -0.13 0.95 7.08 31.12 0.22 1.17 16 28 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 29 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 30 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 31 H 0.07 0.02 8.13 -2.39 -0.02 0.00 16 32 H 0.07 -0.01 8.13 -2.39 -0.02 -0.03 16 33 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 34 H 0.11 -0.29 7.39 -2.38 -0.02 -0.31 16 35 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 36 H 0.09 -0.30 7.84 -2.39 -0.02 -0.32 16 37 H 0.42 -3.79 8.03 -92.70 -0.74 -4.53 16 38 H 0.13 -1.03 8.14 -2.38 -0.02 -1.05 16 39 H 0.12 -0.88 8.14 -2.39 -0.02 -0.90 16 40 H 0.06 0.16 7.62 -2.39 -0.02 0.15 16 41 H 0.07 0.13 7.62 -2.39 -0.02 0.11 16 42 H 0.13 0.72 8.06 -2.91 -0.02 0.70 16 43 H 0.11 0.23 7.96 -2.39 -0.02 0.21 16 44 H 0.40 -2.66 8.70 -74.06 -0.64 -3.30 16 45 H -0.30 -1.62 7.11 99.48 0.71 -0.91 16 46 H -0.28 -0.73 7.11 99.48 0.71 -0.03 16 47 H 0.15 -0.70 4.87 -2.91 -0.01 -0.71 16 48 H 0.15 -0.72 8.06 -2.91 -0.02 -0.75 16 49 H 0.14 0.19 6.30 -2.91 -0.02 0.18 16 50 H 0.11 -0.85 7.85 -2.39 -0.02 -0.87 16 51 H 0.12 -1.18 8.14 -2.39 -0.02 -1.20 16 Total: 0.00 -24.03 430.05 1.61 -22.42 By element: Atomic # 1 Polarization: -16.38 SS G_CDS: -0.38 Total: -16.76 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: 4.79 Total: 7.21 kcal Atomic # 7 Polarization: 3.16 SS G_CDS: -2.52 Total: 0.64 kcal Atomic # 8 Polarization: -12.36 SS G_CDS: -3.07 Total: -15.43 kcal Atomic # 9 Polarization: 0.60 SS G_CDS: 0.75 Total: 1.34 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: 2.04 Total: 0.58 kcal Total: -24.03 1.61 -22.42 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15509216_4549614.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -164.144 kcal (2) G-P(sol) polarization free energy of solvation -24.031 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -188.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.611 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.420 kcal (6) G-S(sol) free energy of system = (1) + (5) -186.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds