Wall clock time and date at job start Sun Mar 7 2021 02:52:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.45202 * 109.46919 * 2 1 4 4 C 1.34230 * 116.99836 * 180.02562 * 3 2 1 5 5 O 1.20833 * 119.99930 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00262 * 180.27336 * 4 3 2 7 7 H 1.08999 * 112.84699 * 309.38839 * 6 4 3 8 8 C 1.53784 * 113.61671 * 80.58076 * 6 4 3 9 9 C 1.53956 * 87.02047 * 139.95482 * 8 6 4 10 10 F 1.39900 * 113.53476 * 89.18935 * 9 8 6 11 11 C 1.52994 * 113.74341 * 220.05985 * 9 8 6 12 12 N 1.46504 * 109.47045 * 277.59784 * 11 9 8 13 13 C 1.34775 * 120.00135 * 180.02562 * 12 11 9 14 14 O 1.21283 * 119.99912 * 359.97438 * 13 12 11 15 15 C 1.50705 * 120.00009 * 179.97438 * 13 12 11 16 16 O 1.42894 * 109.46933 * 179.97438 * 15 13 12 17 17 C 1.35997 * 116.99841 * 179.97438 * 16 15 13 18 18 C 1.39161 * 120.07135 * 179.72491 * 17 16 15 19 19 O 1.35988 * 120.07157 * 0.02562 * 18 17 16 20 20 C 1.42900 * 116.99675 * 179.97438 * 19 18 17 21 21 C 1.38561 * 119.84789 * 179.75004 * 18 17 16 22 22 C 1.38239 * 120.00379 * 0.52880 * 21 18 17 23 23 C 1.50704 * 119.92900 * 179.74842 * 22 21 18 24 24 O 1.42897 * 109.46911 * 254.97764 * 23 22 21 25 25 Si 1.86303 * 109.47100 * 14.97707 * 23 22 21 26 26 C 1.38247 * 120.14601 * 359.72579 * 22 21 18 27 27 N 1.48009 * 119.92983 * 180.02562 * 26 22 21 28 28 O 1.21798 * 120.00319 * 180.02562 * 27 26 22 29 29 O 1.21802 * 119.99845 * 0.02562 * 27 26 22 30 30 C 1.38239 * 120.14773 * 0.02562 * 26 22 21 31 31 C 1.53776 * 113.61785 * 178.19284 * 6 4 3 32 32 H 1.08999 * 109.47371 * 180.02562 * 1 2 3 33 33 H 1.08997 * 109.47687 * 300.00275 * 1 2 3 34 34 H 1.09002 * 109.47633 * 60.00402 * 1 2 3 35 35 H 1.08998 * 109.47242 * 239.99429 * 2 1 3 36 36 H 1.09004 * 109.46797 * 119.99245 * 2 1 3 37 37 H 1.08998 * 113.61449 * 254.53506 * 8 6 4 38 38 H 1.08999 * 113.60890 * 25.43780 * 8 6 4 39 39 H 1.09001 * 109.47393 * 37.59263 * 11 9 8 40 40 H 1.09001 * 109.47098 * 157.60046 * 11 9 8 41 41 H 0.96999 * 119.99643 * 359.97438 * 12 11 9 42 42 H 1.09001 * 109.46720 * 299.99789 * 15 13 12 43 43 H 1.09001 * 109.46964 * 60.00077 * 15 13 12 44 44 H 1.09005 * 109.47357 * 180.02562 * 20 19 18 45 45 H 1.09001 * 109.47389 * 299.99562 * 20 19 18 46 46 H 1.09002 * 109.47487 * 59.99914 * 20 19 18 47 47 H 1.08003 * 119.99914 * 180.25552 * 21 18 17 48 48 H 1.08999 * 109.47424 * 134.97835 * 23 22 21 49 49 H 0.96702 * 114.00026 * 179.97438 * 24 23 22 50 50 H 1.48498 * 110.00036 * 300.00028 * 25 23 22 51 51 H 1.48497 * 109.99911 * 61.32166 * 25 23 22 52 52 H 1.08001 * 120.00422 * 179.97438 * 30 26 22 53 53 H 1.09003 * 113.61780 * 334.56500 * 31 6 4 54 54 H 1.09001 * 113.61843 * 105.46981 * 31 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9207 2.9374 0.0057 7 1 3.4926 3.5759 -0.7671 8 6 3.9445 3.5880 1.3989 9 6 5.3283 4.1496 1.0245 10 9 5.2727 5.3959 0.3914 11 6 6.3399 4.1105 2.1717 12 7 6.1367 5.2716 3.0417 13 6 6.9194 5.4473 4.1247 14 8 7.7915 4.6439 4.3794 15 6 6.7108 6.6420 5.0194 16 8 7.6555 6.6054 6.0908 17 6 7.6029 7.6198 6.9952 18 6 8.4895 7.6446 8.0675 19 8 9.4107 6.6549 8.2131 20 6 10.2884 6.7459 9.3370 21 6 8.4352 8.6830 8.9833 22 6 7.4947 9.6855 8.8368 23 6 7.4335 10.8111 9.8370 24 8 6.3066 10.6244 10.6957 25 14 8.9942 10.8234 10.8543 26 6 6.6105 9.6580 7.7745 27 7 5.6058 10.7341 7.6219 28 8 4.8258 10.7110 6.6867 29 8 5.5590 11.6429 8.4316 30 6 6.6625 8.6277 6.8543 31 6 5.4575 2.9682 0.0486 32 1 -0.3634 -1.0276 0.0005 33 1 -0.3634 0.5138 0.8899 34 1 -0.3634 0.5138 -0.8900 35 1 1.8933 -0.5139 -0.8899 36 1 1.8932 -0.5137 0.8901 37 1 3.1830 4.3558 1.5353 38 1 3.9723 2.8679 2.2166 39 1 6.2005 3.1959 2.7480 40 1 7.3510 4.1335 1.7653 41 1 5.4394 5.9143 2.8378 42 1 6.8501 7.5564 4.4427 43 1 5.6997 6.6193 5.4260 44 1 10.9717 5.8965 9.3342 45 1 10.8604 7.6718 9.2774 46 1 9.7033 6.7388 10.2566 47 1 9.1249 8.7068 9.8142 48 1 7.3356 11.7603 9.3103 49 1 6.2049 11.3134 11.3665 50 1 9.1393 9.5346 11.5776 51 1 10.1707 11.0486 9.9767 52 1 5.9703 8.6083 6.0255 53 1 5.8998 2.0782 0.4966 54 1 5.9157 3.2363 -0.9033 There are 82 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 82 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15509216_4549636.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:52:02 Heat of formation + Delta-G solvation = -198.497035 kcal Electronic energy + Delta-G solvation = -43856.911229 eV Core-core repulsion = 37681.610763 eV Total energy + Delta-G solvation = -6175.300466 eV No. of doubly occupied orbitals = 82 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 443.165 amu Computer time = 2.19 seconds Orbital eigenvalues (eV) -48.96083 -43.46031 -42.22918 -41.86272 -41.08849 -39.83185 -39.26124 -39.08088 -37.80557 -37.58561 -37.13711 -35.83860 -32.88693 -32.76421 -32.68438 -31.08409 -29.26662 -28.78085 -27.97179 -27.17748 -26.35550 -25.68703 -24.08381 -23.75233 -23.17353 -22.07649 -21.94310 -20.82574 -20.71832 -19.96472 -19.59128 -19.25050 -18.89375 -18.69621 -18.32030 -18.21333 -17.92842 -17.88781 -17.77494 -17.43860 -17.31754 -17.07450 -16.81839 -16.57402 -16.20254 -16.04101 -15.84026 -15.75419 -15.49443 -15.32418 -15.00518 -14.75554 -14.61386 -14.55370 -14.28096 -14.19657 -14.06507 -13.89622 -13.68564 -13.58301 -13.55347 -13.01657 -13.00877 -12.94331 -12.72124 -12.68979 -12.62919 -12.53214 -12.51393 -12.44666 -12.39977 -12.21729 -11.95669 -11.92135 -11.60436 -11.59454 -11.42378 -11.17468 -10.63645 -10.40629 -10.24052 -9.62288 -5.00888 -1.40261 -0.57757 0.10768 0.22808 0.99226 1.09342 1.14858 1.28867 1.55948 1.57159 1.70037 1.76890 1.80330 2.17771 2.81332 2.82087 2.92698 3.04073 3.09840 3.18675 3.23630 3.32137 3.36828 3.46125 3.72377 3.75982 3.79613 3.81996 3.87901 3.91979 3.94119 3.99095 4.00850 4.07019 4.10251 4.12770 4.22242 4.25633 4.29097 4.45567 4.50102 4.51460 4.52782 4.57227 4.60153 4.72306 4.78286 4.80311 4.86899 5.02901 5.10450 5.15975 5.22834 5.38701 5.42497 5.87794 6.22633 6.49970 6.58900 6.84060 6.93172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.473 3.527 5 O -0.536 6.536 6 C -0.108 4.108 7 H 0.150 0.850 8 C -0.127 4.127 9 C 0.094 3.906 10 F -0.184 7.184 11 C 0.114 3.886 12 N -0.708 5.708 13 C 0.520 3.480 14 O -0.563 6.563 15 C 0.025 3.975 16 O -0.290 6.290 17 C 0.104 3.896 18 C 0.163 3.837 19 O -0.305 6.305 20 C 0.004 3.996 21 C -0.187 4.187 22 C -0.004 4.004 23 C -0.100 4.100 24 O -0.553 6.553 25 Si 0.778 3.222 26 C -0.043 4.043 27 N 0.037 4.963 28 O -0.192 6.192 29 O -0.140 6.140 30 C -0.106 4.106 31 C -0.131 4.131 32 H 0.095 0.905 33 H 0.069 0.931 34 H 0.068 0.932 35 H 0.067 0.933 36 H 0.069 0.931 37 H 0.118 0.882 38 H 0.111 0.889 39 H 0.094 0.906 40 H 0.078 0.922 41 H 0.422 0.578 42 H 0.131 0.869 43 H 0.132 0.868 44 H 0.131 0.869 45 H 0.072 0.928 46 H 0.072 0.928 47 H 0.169 0.831 48 H 0.101 0.899 49 H 0.408 0.592 50 H -0.268 1.268 51 H -0.277 1.277 52 H 0.191 0.809 53 H 0.112 0.888 54 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.456 2.511 2.201 3.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.020 4.020 3 O -0.275 6.275 4 C 0.317 3.683 5 O -0.426 6.426 6 C -0.126 4.126 7 H 0.168 0.832 8 C -0.165 4.165 9 C 0.075 3.925 10 F -0.164 7.164 11 C -0.010 4.010 12 N -0.363 5.363 13 C 0.306 3.694 14 O -0.441 6.441 15 C -0.052 4.052 16 O -0.202 6.202 17 C 0.056 3.944 18 C 0.115 3.885 19 O -0.216 6.216 20 C -0.090 4.090 21 C -0.206 4.206 22 C -0.006 4.006 23 C -0.208 4.208 24 O -0.363 6.363 25 Si 0.679 3.321 26 C -0.127 4.127 27 N 0.553 4.447 28 O -0.399 6.399 29 O -0.360 6.360 30 C -0.126 4.126 31 C -0.169 4.169 32 H 0.114 0.886 33 H 0.088 0.912 34 H 0.088 0.912 35 H 0.086 0.914 36 H 0.087 0.913 37 H 0.137 0.863 38 H 0.129 0.871 39 H 0.112 0.888 40 H 0.096 0.904 41 H 0.260 0.740 42 H 0.149 0.851 43 H 0.150 0.850 44 H 0.149 0.851 45 H 0.091 0.909 46 H 0.091 0.909 47 H 0.186 0.814 48 H 0.119 0.881 49 H 0.260 0.740 50 H -0.195 1.195 51 H -0.203 1.203 52 H 0.208 0.792 53 H 0.130 0.870 54 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 0.651 -0.135 2.020 2.126 hybrid contribution -0.876 0.266 -0.850 1.249 sum -0.225 0.131 1.169 1.198 Atomic orbital electron populations 1.21827 0.90721 1.04258 1.03786 1.23263 0.96915 0.79282 1.02529 1.86525 1.24171 1.33515 1.83334 1.23865 0.80606 0.92704 0.71135 1.90688 1.61145 1.44121 1.46632 1.22616 0.96925 0.90347 1.02743 0.83240 1.23660 0.96340 1.01255 0.95204 1.21863 0.97250 0.80771 0.92582 1.92905 1.97226 1.43036 1.83259 1.21811 0.99364 0.89938 0.89857 1.45495 1.37233 1.27963 1.25632 1.20234 0.81206 0.86471 0.81510 1.90799 1.34191 1.46391 1.72730 1.22947 0.95006 0.99059 0.88221 1.86293 1.55716 1.42511 1.35708 1.17864 0.95693 0.89849 0.90960 1.18660 0.89282 0.88604 0.91975 1.86310 1.43641 1.43009 1.48663 1.23678 0.92900 1.05908 0.86505 1.21044 1.03152 0.94374 1.02044 1.19320 0.92002 0.95683 0.93595 1.25226 1.02527 0.96936 0.96157 1.86383 1.47198 1.54098 1.48670 0.93531 0.71618 0.84217 0.82714 1.20538 0.96631 0.93324 1.02237 1.43443 1.00553 1.01350 0.99396 1.94524 1.37161 1.83480 1.24720 1.94478 1.75700 1.27898 1.37954 1.20977 0.99431 0.91304 1.00870 1.23585 0.93878 0.98053 1.01412 0.88631 0.91162 0.91249 0.91427 0.91299 0.86346 0.87087 0.88813 0.90367 0.73996 0.85146 0.85013 0.85057 0.90893 0.90893 0.81408 0.88131 0.73953 1.19476 1.20331 0.79151 0.86957 0.87794 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.65 10.29 71.98 0.74 1.39 16 2 C 0.05 0.00 6.19 71.98 0.45 0.44 16 3 O -0.36 -0.67 10.22 -51.41 -0.53 -1.20 16 4 C 0.47 1.05 7.48 71.23 0.53 1.58 16 5 O -0.54 -4.62 15.66 21.94 0.34 -4.27 16 6 C -0.11 0.48 4.23 -11.02 -0.05 0.43 16 7 H 0.15 -1.11 8.14 -2.39 -0.02 -1.13 16 8 C -0.13 0.97 7.09 31.18 0.22 1.20 16 9 C 0.09 -0.55 1.67 -10.21 -0.02 -0.57 16 10 F -0.18 0.64 16.79 44.97 0.76 1.40 16 11 C 0.11 -0.38 5.37 86.38 0.46 0.08 16 12 N -0.71 3.20 5.47 -463.05 -2.53 0.67 16 13 C 0.52 0.98 7.91 87.66 0.69 1.67 16 14 O -0.56 -7.31 16.50 16.00 0.26 -7.04 16 15 C 0.03 -0.08 5.22 71.24 0.37 0.29 16 16 O -0.29 -1.57 9.45 -67.10 -0.63 -2.21 16 17 C 0.10 0.41 6.70 22.57 0.15 0.57 16 18 C 0.16 0.77 6.70 22.57 0.15 0.93 16 19 O -0.30 -1.62 10.28 -79.55 -0.82 -2.44 16 20 C 0.00 -0.01 9.81 113.37 1.11 1.10 16 21 C -0.19 -0.49 7.65 22.35 0.17 -0.32 16 22 C 0.00 -0.02 5.29 -19.86 -0.11 -0.12 16 23 C -0.10 0.01 1.73 71.24 0.12 0.13 16 24 O -0.55 -0.23 11.77 -129.63 -1.53 -1.76 16 25 Si 0.78 -4.05 30.19 68.60 2.07 -1.97 16 26 C -0.04 -0.24 6.85 36.38 0.25 0.01 16 27 N 0.04 0.33 4.45 -46.46 -0.21 0.12 16 28 O -0.19 -1.90 18.44 18.89 0.35 -1.55 16 29 O -0.14 -1.31 14.62 25.10 0.37 -0.94 16 30 C -0.11 -0.18 8.54 22.35 0.19 0.01 16 31 C -0.13 0.57 6.85 31.12 0.21 0.78 16 32 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 33 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 34 H 0.07 -0.30 8.14 -2.39 -0.02 -0.31 16 35 H 0.07 0.04 8.13 -2.39 -0.02 0.02 16 36 H 0.07 0.02 8.13 -2.38 -0.02 0.00 16 37 H 0.12 -1.27 8.14 -2.39 -0.02 -1.29 16 38 H 0.11 -0.84 7.93 -2.39 -0.02 -0.86 16 39 H 0.09 -0.25 7.96 -2.39 -0.02 -0.27 16 40 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 41 H 0.42 -4.41 8.18 -92.71 -0.76 -5.17 16 42 H 0.13 -1.21 7.66 -2.39 -0.02 -1.23 16 43 H 0.13 -1.27 7.66 -2.39 -0.02 -1.29 16 44 H 0.13 -0.84 8.14 -2.38 -0.02 -0.86 16 45 H 0.07 -0.40 7.65 -2.39 -0.02 -0.42 16 46 H 0.07 -0.36 7.67 -2.39 -0.02 -0.38 16 47 H 0.17 -0.13 3.13 -2.91 -0.01 -0.14 16 48 H 0.10 -0.05 6.07 -2.39 -0.01 -0.06 16 49 H 0.41 -3.94 8.74 -74.06 -0.65 -4.59 16 50 H -0.27 0.49 6.74 99.48 0.67 1.16 16 51 H -0.28 0.20 7.11 99.48 0.71 0.90 16 52 H 0.19 -0.79 5.85 -2.91 -0.02 -0.81 16 53 H 0.11 -0.27 7.41 -2.39 -0.02 -0.29 16 54 H 0.10 -0.54 8.14 -2.39 -0.02 -0.55 16 Total: 0.00 -33.43 460.60 3.18 -30.26 By element: Atomic # 1 Polarization: -18.27 SS G_CDS: -0.39 Total: -18.66 kcal Atomic # 6 Polarization: 3.93 SS G_CDS: 5.66 Total: 9.60 kcal Atomic # 7 Polarization: 3.53 SS G_CDS: -2.74 Total: 0.79 kcal Atomic # 8 Polarization: -19.22 SS G_CDS: -2.18 Total: -21.40 kcal Atomic # 9 Polarization: 0.64 SS G_CDS: 0.76 Total: 1.40 kcal Atomic # 14 Polarization: -4.05 SS G_CDS: 2.07 Total: -1.97 kcal Total: -33.43 3.18 -30.26 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15509216_4549636.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.241 kcal (2) G-P(sol) polarization free energy of solvation -33.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -201.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.19 seconds