Wall clock time and date at job start Sun Mar 7 2021 02:52:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45207 * 109.46698 * 2 1 4 4 C 1.34228 * 116.99665 * 179.97438 * 3 2 1 5 5 O 1.20828 * 120.00439 * 0.02562 * 4 3 2 6 6 C 1.50701 * 119.99565 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.91056 * 311.25629 * 6 4 3 8 8 C 1.53784 * 113.61203 * 82.51067 * 6 4 3 9 9 C 1.53776 * 87.08402 * 139.97721 * 8 6 4 10 10 F 1.39904 * 113.69006 * 89.12498 * 9 8 6 11 11 C 1.52996 * 113.61790 * 220.01848 * 9 8 6 12 12 N 1.46501 * 109.47220 * 277.49806 * 11 9 8 13 13 C 1.34770 * 120.00152 * 180.02562 * 12 11 9 14 14 O 1.21284 * 120.00210 * 359.97438 * 13 12 11 15 15 C 1.50702 * 120.00050 * 180.02562 * 13 12 11 16 16 O 1.42901 * 109.47076 * 179.97438 * 15 13 12 17 17 C 1.35898 * 117.00043 * 179.97438 * 16 15 13 18 18 C 1.38707 * 120.05726 * 180.02562 * 17 16 15 19 19 N 1.48001 * 120.02905 * 0.02562 * 18 17 16 20 20 O 1.21800 * 120.00524 * 179.97438 * 19 18 17 21 21 O 1.21802 * 119.99919 * 359.97438 * 19 18 17 22 22 C 1.38172 * 119.94457 * 179.97438 * 18 17 16 23 23 C 1.38241 * 120.05252 * 359.97438 * 22 18 17 24 24 C 1.50704 * 119.94117 * 180.02562 * 23 22 18 25 25 O 1.42898 * 109.46921 * 299.98025 * 24 23 22 26 26 Si 1.86299 * 109.47198 * 179.97438 * 24 23 22 27 27 C 1.38288 * 120.11540 * 359.97438 * 23 22 18 28 28 C 1.38119 * 120.05366 * 0.30245 * 27 23 22 29 29 C 1.53780 * 113.61288 * 180.02562 * 6 4 3 30 30 H 1.08994 * 109.47284 * 60.00651 * 1 2 3 31 31 H 1.09009 * 109.46981 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47622 * 299.99653 * 1 2 3 33 33 H 1.08999 * 109.47622 * 240.00347 * 2 1 3 34 34 H 1.09000 * 109.47544 * 119.99673 * 2 1 3 35 35 H 1.09001 * 113.61229 * 25.43037 * 8 6 4 36 36 H 1.08994 * 113.61320 * 254.53092 * 8 6 4 37 37 H 1.09004 * 109.46937 * 157.49684 * 11 9 8 38 38 H 1.09004 * 109.46880 * 37.50111 * 11 9 8 39 39 H 0.97001 * 119.99571 * 359.97438 * 12 11 9 40 40 H 1.08996 * 109.47101 * 59.99438 * 15 13 12 41 41 H 1.08999 * 109.46731 * 299.99730 * 15 13 12 42 42 H 1.08004 * 119.97093 * 180.02562 * 22 18 17 43 43 H 1.09004 * 109.46907 * 59.97938 * 24 23 22 44 44 H 0.96699 * 114.00144 * 299.99556 * 25 24 23 45 45 H 1.48498 * 109.99687 * 58.68020 * 26 24 23 46 46 H 1.48497 * 110.00002 * 179.97438 * 26 24 23 47 47 H 1.08002 * 119.96980 * 180.02562 * 27 23 22 48 48 H 1.08004 * 120.02504 * 179.72836 * 28 27 23 49 49 H 1.08996 * 113.61797 * 105.47115 * 29 6 4 50 50 H 1.09002 * 113.69170 * 334.58024 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3691 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9205 2.9376 0.0000 7 1 3.4712 3.5823 -0.7554 8 6 3.9855 3.5778 1.3967 9 6 5.3558 4.1432 0.9876 10 9 5.2846 5.3939 0.3647 11 6 6.3975 4.0956 2.1072 12 7 6.2186 5.2509 2.9901 13 6 7.0300 5.4186 4.0531 14 8 7.9079 4.6129 4.2791 15 6 6.8456 6.6067 4.9617 16 8 7.8187 6.5623 6.0073 17 6 7.7905 7.5692 6.9195 18 6 8.7066 7.5891 7.9608 19 7 9.7166 6.5137 8.0794 20 8 10.5211 6.5319 8.9937 21 8 9.7432 5.6105 7.2627 22 6 8.6762 8.6142 8.8867 23 6 7.7341 9.6198 8.7755 24 6 7.7036 10.7370 9.7865 25 8 7.4781 10.1946 11.0891 26 14 6.3306 11.9222 9.3610 27 6 6.8203 9.6028 7.7377 28 6 6.8429 8.5772 6.8129 29 6 5.4580 2.9684 0.0001 30 1 -0.3633 0.5137 -0.8900 31 1 -0.3633 -1.0278 0.0005 32 1 -0.3634 0.5138 0.8900 33 1 1.8934 -0.5138 -0.8900 34 1 1.8934 -0.5138 0.8900 35 1 4.0373 2.8516 2.2079 36 1 3.2283 4.3443 1.5613 37 1 7.3975 4.1206 1.6742 38 1 6.2727 3.1771 2.6807 39 1 5.5167 5.8954 2.8092 40 1 5.8458 6.5811 5.3950 41 1 6.9696 7.5253 4.3883 42 1 9.3896 8.6304 9.6974 43 1 8.6569 11.2654 9.7729 44 1 6.6459 9.7097 11.1747 45 1 5.0293 11.2071 9.3448 46 1 6.2895 13.0284 10.3508 47 1 6.0856 10.3898 7.6529 48 1 6.1262 8.5621 6.0050 49 1 5.8893 3.2430 -0.9625 50 1 5.9139 2.0760 0.4289 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15509216_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:52:10 Heat of formation + Delta-G solvation = -170.291934 kcal Electronic energy + Delta-G solvation = -38780.227997 eV Core-core repulsion = 33080.370407 eV Total energy + Delta-G solvation = -5699.857590 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 413.150 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -49.11246 -43.03508 -41.87002 -41.75973 -40.79875 -39.65935 -39.22504 -37.66759 -37.50418 -37.13663 -35.80200 -33.54528 -32.82135 -32.44219 -31.21016 -29.17983 -27.60938 -27.40532 -26.83152 -26.21842 -24.19694 -23.81571 -22.83467 -22.12523 -21.90781 -20.86694 -20.49637 -19.49014 -19.41442 -19.13178 -18.59051 -18.36468 -18.35846 -17.84074 -17.76245 -17.58951 -17.50311 -17.26498 -16.95281 -16.58642 -16.40158 -16.20294 -16.01714 -15.89083 -15.70702 -15.40761 -15.10243 -14.94407 -14.66913 -14.61012 -14.30960 -14.12469 -13.97026 -13.85916 -13.83483 -13.61778 -13.32040 -13.12162 -13.03814 -12.76109 -12.60985 -12.58386 -12.55818 -12.20938 -12.07013 -12.02567 -11.86371 -11.77527 -11.74476 -11.61128 -11.42087 -11.06944 -10.98794 -10.90859 -10.41588 -9.93828 -5.23281 -1.14647 -0.40145 0.36737 0.51734 0.96488 1.01186 1.03400 1.31684 1.33065 1.50217 1.74449 1.91249 2.06791 2.62974 2.76194 2.94038 2.95387 3.00221 3.06668 3.13954 3.19727 3.20227 3.37422 3.51013 3.53846 3.58113 3.68162 3.71740 3.86885 3.91479 3.95082 4.08241 4.12695 4.15968 4.21229 4.23114 4.28764 4.32205 4.39329 4.41557 4.48981 4.60485 4.64036 4.65904 4.72390 4.88990 4.90814 4.93945 5.03514 5.35903 5.40484 5.68370 6.10005 6.14277 6.62493 6.91454 6.92570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.472 3.528 5 O -0.501 6.501 6 C -0.109 4.109 7 H 0.134 0.866 8 C -0.136 4.136 9 C 0.084 3.916 10 F -0.180 7.180 11 C 0.116 3.884 12 N -0.726 5.726 13 C 0.515 3.485 14 O -0.493 6.493 15 C 0.032 3.968 16 O -0.254 6.254 17 C 0.200 3.800 18 C -0.075 4.075 19 N 0.029 4.971 20 O -0.177 6.177 21 O -0.118 6.118 22 C 0.009 3.991 23 C -0.156 4.156 24 C -0.072 4.072 25 O -0.525 6.525 26 Si 0.688 3.312 27 C -0.024 4.024 28 C -0.209 4.209 29 C -0.129 4.129 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.109 0.891 36 H 0.099 0.901 37 H 0.089 0.911 38 H 0.095 0.905 39 H 0.405 0.595 40 H 0.103 0.897 41 H 0.104 0.896 42 H 0.165 0.835 43 H 0.126 0.874 44 H 0.378 0.622 45 H -0.256 1.256 46 H -0.250 1.250 47 H 0.150 0.850 48 H 0.157 0.843 49 H 0.099 0.901 50 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.911 6.238 -4.576 12.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.315 3.685 5 O -0.388 6.388 6 C -0.128 4.128 7 H 0.152 0.848 8 C -0.173 4.173 9 C 0.065 3.935 10 F -0.160 7.160 11 C -0.008 4.008 12 N -0.382 5.382 13 C 0.299 3.701 14 O -0.365 6.365 15 C -0.047 4.047 16 O -0.163 6.163 17 C 0.150 3.850 18 C -0.160 4.160 19 N 0.548 4.452 20 O -0.385 6.385 21 O -0.342 6.342 22 C -0.010 4.010 23 C -0.157 4.157 24 C -0.182 4.182 25 O -0.331 6.331 26 Si 0.588 3.412 27 C -0.042 4.042 28 C -0.228 4.228 29 C -0.167 4.167 30 H 0.087 0.913 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.128 0.872 36 H 0.118 0.882 37 H 0.107 0.893 38 H 0.113 0.887 39 H 0.240 0.760 40 H 0.120 0.880 41 H 0.122 0.878 42 H 0.182 0.818 43 H 0.144 0.856 44 H 0.226 0.774 45 H -0.181 1.181 46 H -0.175 1.175 47 H 0.167 0.833 48 H 0.174 0.826 49 H 0.118 0.882 50 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -9.551 6.348 -4.058 12.165 hybrid contribution -0.654 -0.807 0.399 1.113 sum -10.205 5.542 -3.659 12.176 Atomic orbital electron populations 1.21825 0.92242 1.03358 1.03670 1.23119 0.95675 0.79640 1.02875 1.86511 1.24159 1.32954 1.83613 1.23295 0.80838 0.91986 0.72404 1.90708 1.60500 1.42770 1.44822 1.22484 0.97197 0.91847 1.01247 0.84814 1.23618 0.96592 1.01138 0.95997 1.21984 0.96939 0.81105 0.93503 1.92906 1.97137 1.42322 1.83614 1.21818 0.99325 0.90009 0.89614 1.45581 1.36454 1.28284 1.27880 1.19794 0.82316 0.86706 0.81302 1.90887 1.31282 1.43446 1.70847 1.22698 0.93315 0.99435 0.89220 1.86498 1.52422 1.42084 1.35281 1.18690 0.91522 0.87577 0.87168 1.20588 0.97525 0.95775 1.02107 1.43338 1.00549 1.01234 1.00030 1.94559 1.34700 1.82982 1.26298 1.94698 1.76896 1.26679 1.35919 1.20842 0.96265 0.88674 0.95191 1.20258 0.97508 0.98714 0.99235 1.25074 1.12044 0.98054 0.83016 1.86659 1.44226 1.73442 1.28794 0.95171 0.76360 0.79941 0.89750 1.21264 0.95535 0.96075 0.91308 1.21274 1.01581 0.95825 1.04149 1.23589 0.93703 0.98322 1.01094 0.91323 0.89920 0.91367 0.90969 0.91003 0.87239 0.88225 0.89272 0.88651 0.75976 0.87958 0.87775 0.81800 0.85608 0.77422 1.18126 1.17492 0.83329 0.82556 0.88214 0.86095 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.38 10.29 37.16 0.38 0.76 16 2 C 0.06 -0.04 6.19 37.16 0.23 0.19 16 3 O -0.36 -0.14 10.22 -39.25 -0.40 -0.54 16 4 C 0.47 0.21 7.48 36.01 0.27 0.48 16 5 O -0.50 -1.68 15.65 -18.75 -0.29 -1.98 16 6 C -0.11 0.28 4.24 -90.96 -0.39 -0.10 16 7 H 0.13 -0.50 8.14 -51.93 -0.42 -0.92 16 8 C -0.14 0.56 7.08 -25.92 -0.18 0.37 16 9 C 0.08 -0.28 1.67 -89.79 -0.15 -0.43 16 10 F -0.18 0.38 16.80 2.25 0.04 0.41 16 11 C 0.12 -0.28 5.37 -4.04 -0.02 -0.30 16 12 N -0.73 2.22 5.47 -60.29 -0.33 1.89 16 13 C 0.52 -0.02 7.91 -10.99 -0.09 -0.11 16 14 O -0.49 -2.73 16.50 -14.36 -0.24 -2.96 16 15 C 0.03 -0.10 5.22 36.01 0.19 0.09 16 16 O -0.25 -0.44 7.68 -49.77 -0.38 -0.82 16 17 C 0.20 0.06 6.67 -39.22 -0.26 -0.20 16 18 C -0.08 -0.19 6.87 -79.81 -0.55 -0.73 16 19 N 0.03 0.18 4.45 34.03 0.15 0.33 16 20 O -0.18 -1.26 18.45 -29.46 -0.54 -1.80 16 21 O -0.12 -0.99 17.24 -36.49 -0.63 -1.62 16 22 C 0.01 0.00 9.11 -39.60 -0.36 -0.36 16 23 C -0.16 0.37 5.39 -104.60 -0.56 -0.19 16 24 C -0.07 0.20 2.82 36.01 0.10 0.30 16 25 O -0.52 0.43 12.77 -35.23 -0.45 -0.02 16 26 Si 0.69 -2.67 29.78 -169.99 -5.06 -7.74 16 27 C -0.02 0.10 8.66 -39.61 -0.34 -0.24 16 28 C -0.21 0.77 9.04 -39.43 -0.36 0.42 16 29 C -0.13 0.35 6.86 -25.90 -0.18 0.18 16 30 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.08 -0.29 8.14 -51.92 -0.42 -0.71 16 32 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 34 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 35 H 0.11 -0.45 7.91 -51.93 -0.41 -0.86 16 36 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 37 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 38 H 0.10 -0.21 7.94 -51.93 -0.41 -0.62 16 39 H 0.41 -2.39 8.19 -40.82 -0.33 -2.73 16 40 H 0.10 -0.65 7.65 -51.93 -0.40 -1.05 16 41 H 0.10 -0.65 7.67 -51.93 -0.40 -1.05 16 42 H 0.16 0.05 7.61 -52.48 -0.40 -0.35 16 43 H 0.13 -0.43 7.96 -51.93 -0.41 -0.84 16 44 H 0.38 -1.42 8.70 45.56 0.40 -1.02 16 45 H -0.26 0.62 7.11 56.52 0.40 1.02 16 46 H -0.25 0.00 7.11 56.52 0.40 0.40 16 47 H 0.15 -1.02 4.87 -52.49 -0.26 -1.27 16 48 H 0.16 -1.15 6.30 -52.48 -0.33 -1.48 16 49 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 50 H 0.12 -0.25 7.40 -51.93 -0.38 -0.64 16 LS Contribution 435.55 15.07 6.56 6.56 Total: 0.00 -14.43 435.55 -10.19 -24.61 By element: Atomic # 1 Polarization: -10.10 SS G_CDS: -6.34 Total: -16.44 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -2.27 Total: 0.11 kcal Atomic # 7 Polarization: 2.40 SS G_CDS: -0.18 Total: 2.22 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -2.94 Total: -9.74 kcal Atomic # 9 Polarization: 0.38 SS G_CDS: 0.04 Total: 0.41 kcal Atomic # 14 Polarization: -2.67 SS G_CDS: -5.06 Total: -7.74 kcal Total LS contribution 6.56 Total: 6.56 kcal Total: -14.43 -10.19 -24.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15509216_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.678 kcal (2) G-P(sol) polarization free energy of solvation -14.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -160.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.614 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds